RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 HIGD2AQ9BW72 106 aa3.9□□□□□ -1.79
SF3B1-206ENST00000462613 UQCR10Q9UDW1 63 aa3.9□□□□□ -1.79
SF3B1-206ENST00000462613 ZNF706Q9Y5V0 76 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-206ENST00000462613 A4D1N5 150 aa3.89□□□□□ -1.79
SF3B1-206ENST00000462613 EIF4EBP3O60516 100 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-206ENST00000462613 SPRR1AP35321 89 aa3.89□□□□□ -1.79
SF3B1-206ENST00000462613 VAMP3Q15836 100 aa3.89□□□□□ -1.79
SF3B1-206ENST00000462613 RAB37Q96AX2 223 aa3.89□□□□□ -1.79
SF3B1-206ENST00000462613 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
SF3B1-206ENST00000462613 KRTAP29-1A8MX34 341 aaPredicted RBP3.88□□□□□ -1.79
SF3B1-206ENST00000462613 TSTD3H0UI37 97 aa3.88□□□□□ -1.79
SF3B1-206ENST00000462613 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
SF3B1-206ENST00000462613 Q6ZRX8 168 aa3.88□□□□□ -1.79
SF3B1-206ENST00000462613 CEND1Q8N111 149 aa3.88□□□□□ -1.79
SF3B1-206ENST00000462613 TRBV7-6A0A0J9YX20 115 aa3.87□□□□□ -1.79
SF3B1-206ENST00000462613 A0A1B0GWB2 263 aa3.87□□□□□ -1.79
SF3B1-206ENST00000462613 SLC25A20O43772 301 aa3.87□□□□□ -1.79
SF3B1-206ENST00000462613 SNCGO76070 127 aa3.87□□□□□ -1.79
SF3B1-206ENST00000462613 HSD52Q0P140 79 aa3.87□□□□□ -1.79
SF3B1-206ENST00000462613 Q1RN00 199 aa3.87□□□□□ -1.79
SF3B1-206ENST00000462613 C6orf99Q4VX62 202 aa3.87□□□□□ -1.79
SF3B1-206ENST00000462613 NHP2Q9NX24 153 aaKnown RBP3.87□□□□□ -1.79
SF3B1-206ENST00000462613 DHRS4-AS1Q9P1J3 65 aa3.87□□□□□ -1.79
SF3B1-206ENST00000462613 B5MCH6 92 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 CRYGAP11844 174 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 COX7BP24311 80 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 BVES-AS1Q5T3Y7 98 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 C2orf91Q6ZV80 131 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 KRTAP13-1Q8IUC0 172 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 LINC01600Q96MT4 127 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 C12orf57Q99622 126 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 HERC2O95714 4834 aa3.86□□□□□ -1.79
SF3B1-206ENST00000462613 A0A0B4J2C4 111 aa3.85□□□□□ -1.79
SF3B1-206ENST00000462613 KRTAP4-16G5E9R7 235 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-206ENST00000462613 M0R143 59 aa3.85□□□□□ -1.79
SF3B1-206ENST00000462613 FAM229BQ4G0N7 80 aa3.85□□□□□ -1.79
SF3B1-206ENST00000462613 SMCR5Q8TEV8 140 aa3.85□□□□□ -1.79
SF3B1-206ENST00000462613 LOC105371267A0A1B0GV96 52 aa3.84□□□□□ -1.79
SF3B1-206ENST00000462613 H7C2G1 150 aa3.84□□□□□ -1.79
SF3B1-206ENST00000462613 ELOF1P60002 83 aaKnown RBP3.84□□□□□ -1.79
SF3B1-206ENST00000462613 SMIM11BQ8TCY0 68 aa3.84□□□□□ -1.79
SF3B1-206ENST00000462613 PRO1933Q9H354 126 aa3.84□□□□□ -1.79
SF3B1-206ENST00000462613 PRO1854Q9UHT4 67 aa3.84□□□□□ -1.79
SF3B1-206ENST00000462613 FAT1Q14517 4588 aa3.83□□□□□ -1.8
SF3B1-206ENST00000462613 COX6CP09669 75 aa3.83□□□□□ -1.8
SF3B1-206ENST00000462613 CFC1BP0CG36 223 aa3.83□□□□□ -1.8
SF3B1-206ENST00000462613 CFC1P0CG37 223 aa3.83□□□□□ -1.8
SF3B1-206ENST00000462613 GAGE2AQ6NT46 116 aa3.83□□□□□ -1.8
SF3B1-206ENST00000462613 PRR26Q8N8Z3 221 aa3.83□□□□□ -1.8
SF3B1-206ENST00000462613 TYMSOSQ8TAI1 123 aa3.83□□□□□ -1.8
SF3B1-206ENST00000462613 SPRR4Q96PI1 79 aa3.83□□□□□ -1.8
SF3B1-206ENST00000462613 DMBT1Q9UGM3 2413 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-206ENST00000462613 VPS13BQ7Z7G8 4022 aa3.82□□□□□ -1.8
SF3B1-206ENST00000462613 H0YGX0 51 aa3.82□□□□□ -1.8
SF3B1-206ENST00000462613 GHRHP01286 108 aa3.82□□□□□ -1.8
SF3B1-206ENST00000462613 KRTAP1-4P0C5Y4 121 aa3.82□□□□□ -1.8
SF3B1-206ENST00000462613 PSMB2P49721 201 aa3.82□□□□□ -1.8
SF3B1-206ENST00000462613 FXYD2P54710 66 aa3.82□□□□□ -1.8
SF3B1-206ENST00000462613 Q9BRP9 147 aa3.82□□□□□ -1.8
SF3B1-206ENST00000462613 hADV29S1A0JD25 119 aa3.81□□□□□ -1.8
SF3B1-206ENST00000462613 LAMTOR3Q9UHA4 124 aa3.81□□□□□ -1.8
SF3B1-206ENST00000462613 TEX49A0A1B0GTD5 131 aa3.8□□□□□ -1.8
SF3B1-206ENST00000462613 ERC2-IT1O76042 136 aa3.8□□□□□ -1.8
SF3B1-206ENST00000462613 CTAG1AP78358 180 aa3.8□□□□□ -1.8
SF3B1-206ENST00000462613 C4orf48Q5BLP8 95 aa3.8□□□□□ -1.8
SF3B1-206ENST00000462613 A0A087X002 238 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 IGLV9-49A0A0B4J1Y8 123 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 F8WEM9 126 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 DNAL4O96015 105 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 KRTAP10-8P60410 259 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 LINC00483Q53H64 154 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 OCIAD2Q56VL3 154 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 C9orf153Q5TBE3 101 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 LINC00575Q6W349 94 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 DEFB105AQ8NG35 78 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 ANAPC11Q9NYG5 84 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 PCLOQ9Y6V0 5065 aa3.79□□□□□ -1.8
SF3B1-206ENST00000462613 A0A1B0GX51 115 aa3.78□□□□□ -1.8
SF3B1-206ENST00000462613 MT1HL1P0DM35 61 aa3.78□□□□□ -1.8
SF3B1-206ENST00000462613 SCGB1C2P0DMR2 95 aa3.78□□□□□ -1.8
SF3B1-206ENST00000462613 LYRM7Q5U5X0 104 aa3.78□□□□□ -1.8
SF3B1-206ENST00000462613 SPAG11AQ6PDA7 123 aa3.78□□□□□ -1.8
SF3B1-206ENST00000462613 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-206ENST00000462613 LINC00304Q8N9R0 145 aa3.78□□□□□ -1.8
SF3B1-206ENST00000462613 PPDPFLQ8WWR9 84 aa3.78□□□□□ -1.8
SF3B1-206ENST00000462613 K7ERJ3 54 aa3.77□□□□□ -1.81
SF3B1-206ENST00000462613 SPRR1BP22528 89 aa3.77□□□□□ -1.81
SF3B1-206ENST00000462613 MOBPQ13875 183 aa3.77□□□□□ -1.81
SF3B1-206ENST00000462613 BATFQ16520 125 aa3.77□□□□□ -1.81
SF3B1-206ENST00000462613 Q6ZQY7 126 aa3.77□□□□□ -1.81
SF3B1-206ENST00000462613 SSBP3-AS1Q7Z2R9 100 aa3.77□□□□□ -1.81
SF3B1-206ENST00000462613 ST20-AS1Q8NBB2 130 aa3.77□□□□□ -1.81
SF3B1-206ENST00000462613 Q8NBF4 154 aa3.77□□□□□ -1.81
SF3B1-206ENST00000462613 IGLV5-48A0A075B6I7 105 aa3.76□□□□□ -1.81
SF3B1-206ENST00000462613 H3BQ85 93 aa3.76□□□□□ -1.81
SF3B1-206ENST00000462613 TRIAP1O43715 76 aa3.76□□□□□ -1.81
SF3B1-206ENST00000462613 TSPAN13O95857 204 aa3.76□□□□□ -1.81
SF3B1-206ENST00000462613 C3orf22Q8N5N4 141 aa3.76□□□□□ -1.81
SF3B1-206ENST00000462613 SNHG12Q9BXW3 62 aa3.76□□□□□ -1.81
SF3B1-206ENST00000462613 ABCA13Q86UQ4 5058 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms