RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 LRRK2Q5S007 2527 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 PTPN13Q12923 2485 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 A0A1W2PNM2 257 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 RPL37AP8A6NKH3 93 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 DNAH10OSP0CZ25 163 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 SPRR1AP35321 89 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 UBE2BP63146 152 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 LINC00336Q6ZUF6 198 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 FP248Q71RG6 208 aaPredicted RBP2.28□□□□□ -2.04
COL8A1-204ENST00000462604 MRPL55Q7Z7F7 128 aaKnown RBP2.28□□□□□ -2.04
COL8A1-204ENST00000462604 PRR26Q8N8Z3 221 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 Q9BRP9 147 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 HIGD2AQ9BW72 106 aa2.28□□□□□ -2.04
COL8A1-204ENST00000462604 CSMD2Q7Z408 3487 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 MXRA5Q9NR99 2828 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 SPTBN4Q9H254 2564 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 FAM208BQ5VWN6 2430 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 WNK1Q9H4A3 2382 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 ZANQ9Y493 2812 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 LCE6AA0A183 80 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 HCG22E2RYF7 251 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 KRTAP4-16G5E9R7 235 aaPredicted RBP2.27□□□□□ -2.05
COL8A1-204ENST00000462604 KRTAP10-11P60412 298 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 REG3GQ6UW15 175 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 ST20-AS1Q8NBB2 130 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 SPRR4Q96PI1 79 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 LINC00474Q9P2X8 69 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 C2CD3Q4AC94 2353 aa2.27□□□□□ -2.05
COL8A1-204ENST00000462604 SETXQ7Z333 2677 aaKnown RBP2.26□□□□□ -2.05
COL8A1-204ENST00000462604 SORL1Q92673 2214 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 FAM168BA1KXE4 195 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 K7EQZ3 153 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 NDUFB1O75438 58 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 MP68P56378 58 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 DSCR10P59022 87 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 MPLKIPQ8TAP9 179 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 LINC00476Q8WZB0 136 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 CHD6Q8TD26 2715 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 ABCA12Q86UK0 2595 aa2.26□□□□□ -2.05
COL8A1-204ENST00000462604 UTP20O75691 2785 aaKnown RBP2.26□□□□□ -2.05
COL8A1-204ENST00000462604 ITPR3Q14573 2671 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 USP24Q9UPU5 2620 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 hDV103S1A0JD37 113 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 PSCAO43653 123 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 UBE2AP49459 152 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 FAM229BQ4G0N7 80 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 CRYBG3Q68DQ2 2970 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 ZCCHC13Q8WW36 166 aaKnown RBP2.25□□□□□ -2.05
COL8A1-204ENST00000462604 PKIGQ9Y2B9 76 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 LINC00588Q9Y4M8 146 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 DNAH1Q9P2D7 4330 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 CENPEQ02224 2701 aa2.25□□□□□ -2.05
COL8A1-204ENST00000462604 MAP1AP78559 2803 aaPredicted RBP2.24□□□□□ -2.05
COL8A1-204ENST00000462604 JMJD1CQ15652 2540 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 TLN2Q9Y4G6 2542 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 IGLV8-61A0A075B6I0 122 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.24□□□□□ -2.05
COL8A1-204ENST00000462604 H3BPC8 53 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 CASC10Q5T4H9 136 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 IGFL1Q6UW32 110 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 V9GYY9 64 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 ZNF469Q96JG9 3925 aaPredicted RBP2.24□□□□□ -2.05
COL8A1-204ENST00000462604 ZFYVE26Q68DK2 2539 aa2.24□□□□□ -2.05
COL8A1-204ENST00000462604 APCP25054 2843 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 NOTCH3Q9UM47 2321 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 A0A087WSZ3 146 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 C16orf90A8MZG2 172 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 Q1T7F1 81 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 C14orf177Q52M58 125 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 C1orf195Q5TG92 126 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 CASC2Q6XLA1 102 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 WFDC13Q8IUB5 93 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 KRTAP7-1Q8IUC3 87 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 C1orf64Q8NEQ6 169 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 FLNAP21333 2647 aaKnown RBP2.23□□□□□ -2.05
COL8A1-204ENST00000462604 TEX15Q9BXT5 2789 aa2.23□□□□□ -2.05
COL8A1-204ENST00000462604 SONP18583 2426 aaKnown RBP2.22□□□□□ -2.05
COL8A1-204ENST00000462604 DNAH3Q8TD57 4116 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 NIPBLQ6KC79 2804 aaeCLIP2.22□□□□□ -2.05
COL8A1-204ENST00000462604 A0A096LNI7 61 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 TRAV22A0A0B4J277 110 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 IGKV2-24A0A0C4DH68 120 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 H0Y9P7 68 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 CNBPP62633 177 aaKnown RBP2.22□□□□□ -2.05
COL8A1-204ENST00000462604 PRLHP81277 87 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 HIVEP2P31629 2446 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 CUBNO60494 3623 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 CCDC168Q8NDH2 2452 aa2.22□□□□□ -2.05
COL8A1-204ENST00000462604 A8MWP4 228 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 H0Y9J4 135 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 SPRR1BP22528 89 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 PRR4Q16378 134 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 DEFB116Q30KQ4 102 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 PRR15Q8IV56 129 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 UBE2DNLQ8IWF7 75 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 SPANXA2-OT1Q8N9U9 137 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 LINC00208Q96KT6 92 aa2.21□□□□□ -2.06
COL8A1-204ENST00000462604 B9D2Q9BPU9 175 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms