RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SLC25A34Q6PIV7 304 aa2.42□□□□□ -2.02
COPS3-204ENST00000462236 C8orf17Q9NRJ1 99 aa2.42□□□□□ -2.02
COPS3-204ENST00000462236 TOMM7Q9P0U1 55 aa2.42□□□□□ -2.02
COPS3-204ENST00000462236 MT2AP02795 61 aa2.41□□□□□ -2.02
COPS3-204ENST00000462236 SPRR1AP35321 89 aa2.41□□□□□ -2.02
COPS3-204ENST00000462236 IFI27P40305 119 aaPredicted RBP2.41□□□□□ -2.02
COPS3-204ENST00000462236 COX6B2Q6YFQ2 88 aa2.41□□□□□ -2.02
COPS3-204ENST00000462236 HIGD2AQ9BW72 106 aa2.41□□□□□ -2.02
COPS3-204ENST00000462236 CDKN2A-AS1Q9UH64 79 aa2.41□□□□□ -2.02
COPS3-204ENST00000462236 ZNF706Q9Y5V0 76 aaPredicted RBP2.41□□□□□ -2.02
COPS3-204ENST00000462236 IGIPA6NJ69 53 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 HMSDA8MTL9 139 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 TMEM250H0YL14 139 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 NPYP01303 97 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 RAB5AP20339 215 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 HERVK_113P63121 156 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
COPS3-204ENST00000462236 SPANXA2-OT1Q8N9U9 137 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 SMCR5Q8TEV8 140 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 BORCS7Q96B45 105 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 OSTCQ9NRP0 149 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 CBY1Q9Y3M2 126 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 V9GYV3 84 aa2.4□□□□□ -2.03
COPS3-204ENST00000462236 MT1FP04733 61 aa2.39□□□□□ -2.03
COPS3-204ENST00000462236 RPL37P61927 97 aaKnown RBP2.39□□□□□ -2.03
COPS3-204ENST00000462236 PDZD11Q5EBL8 140 aa2.39□□□□□ -2.03
COPS3-204ENST00000462236 ST20-AS1Q8NBB2 130 aa2.39□□□□□ -2.03
COPS3-204ENST00000462236 COX7B2Q8TF08 81 aa2.39□□□□□ -2.03
COPS3-204ENST00000462236 A0A1B0GXF2 115 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 C9orf92A6NGG3 77 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 A8MUU9 505 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 D6R8Y8 96 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 SMLR1H3BR10 107 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 CKS2P33552 79 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 SEC11AP67812 179 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 C2orf88Q9BSF0 95 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 SND1-IT1Q9HBX3 110 aa2.38□□□□□ -2.03
COPS3-204ENST00000462236 A0A1B0GW15 77 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 SMIM27A0A1W2PRY6 76 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 TEX46H3BTG2 121 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 IGLV6-57P01721 117 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 PPBPP02775 128 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 RAB5BP61020 215 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 KCNQ1DNQ9H478 68 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 NAT8BQ9UHF3 227 aa2.37□□□□□ -2.03
COPS3-204ENST00000462236 SMIM26A0A096LP01 95 aa2.36□□□□□ -2.03
COPS3-204ENST00000462236 TINCRA0A1B0GVN0 87 aa2.36□□□□□ -2.03
COPS3-204ENST00000462236 KANTRA0A1W2PQU2 76 aa2.36□□□□□ -2.03
COPS3-204ENST00000462236 ERC2-IT1O76042 136 aa2.36□□□□□ -2.03
COPS3-204ENST00000462236 CYSLTR1Q9Y271 337 aa2.36□□□□□ -2.03
COPS3-204ENST00000462236 COX17Q14061 63 aa2.35□□□□□ -2.03
COPS3-204ENST00000462236 ORMDL3Q8N138 153 aa2.35□□□□□ -2.03
COPS3-204ENST00000462236 Q8N8P6 123 aa2.35□□□□□ -2.03
COPS3-204ENST00000462236 PRELID3AQ96N28 172 aa2.35□□□□□ -2.03
COPS3-204ENST00000462236 Q9BRP9 147 aa2.35□□□□□ -2.03
COPS3-204ENST00000462236 LINC00846Q9NV44 126 aa2.35□□□□□ -2.03
COPS3-204ENST00000462236 LAMTOR2Q9Y2Q5 125 aa2.35□□□□□ -2.03
COPS3-204ENST00000462236 K7EMI3 77 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 RAB14P61106 215 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 Q5XG85 94 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 TMEM136Q6ZRR5 245 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 AKAP14Q86UN6 197 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 MIR7-3HGQ8N6C7 128 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 TOMM6Q96B49 74 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 SMIM7Q9BQ49 75 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 ERG28Q9UKR5 140 aa2.34□□□□□ -2.03
COPS3-204ENST00000462236 LOC389332A0A1B0GUA5 103 aa2.33□□□□□ -2.04
COPS3-204ENST00000462236 F8W036 122 aa2.33□□□□□ -2.04
COPS3-204ENST00000462236 SPINK8P0C7L1 97 aa2.33□□□□□ -2.04
COPS3-204ENST00000462236 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
COPS3-204ENST00000462236 HSBP1O75506 76 aa2.32□□□□□ -2.04
COPS3-204ENST00000462236 S100A8P05109 93 aa2.32□□□□□ -2.04
COPS3-204ENST00000462236 SRP19P09132 144 aaKnown RBP2.32□□□□□ -2.04
COPS3-204ENST00000462236 C1orf195Q5TG92 126 aa2.32□□□□□ -2.04
COPS3-204ENST00000462236 MRPL54Q6P161 138 aaKnown RBP2.32□□□□□ -2.04
COPS3-204ENST00000462236 SPINT4Q6UDR6 99 aa2.32□□□□□ -2.04
COPS3-204ENST00000462236 ZNF625Q96I27 306 aaPredicted RBP2.32□□□□□ -2.04
COPS3-204ENST00000462236 MAP1LC3AQ9H492 121 aa2.32□□□□□ -2.04
COPS3-204ENST00000462236 CHTOPQ9Y3Y2 248 aaKnown RBP2.32□□□□□ -2.04
COPS3-204ENST00000462236 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
COPS3-204ENST00000462236 TRAV9-1A0A075B6T8 112 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 TRBV10-3A0A0K0K1G6 114 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 ETDCA0A1B0GVM5 59 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 LINC01546A6NGU7 62 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 PSPHP1O15172 72 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 ADCYAP1P18509 176 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 SPRR1BP22528 89 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 CD164Q04900 197 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 Q6ZRX8 168 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 ATP5L2Q7Z4Y8 100 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 SLC51BQ86UW2 128 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 CST9LQ9H4G1 147 aa2.31□□□□□ -2.04
COPS3-204ENST00000462236 LOC107984156A0A0G2JMH3 177 aa2.3□□□□□ -2.04
COPS3-204ENST00000462236 C20orf202A1L168 122 aa2.3□□□□□ -2.04
COPS3-204ENST00000462236 IGLC3P0DOY3 106 aa2.3□□□□□ -2.04
COPS3-204ENST00000462236 ZNF22P17026 224 aaPredicted RBP2.3□□□□□ -2.04
COPS3-204ENST00000462236 C9orf153Q5TBE3 101 aa2.3□□□□□ -2.04
COPS3-204ENST00000462236 Q6Q795 121 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms