RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 SPATA45Q537H7 98 aa7.08□□□□□ -1.28
TRAF3IP1-204ENST00000462122 LINC00518Q8N0U6 118 aa7.08□□□□□ -1.28
TRAF3IP1-204ENST00000462122 CBY1Q9Y3M2 126 aa7.08□□□□□ -1.28
TRAF3IP1-204ENST00000462122 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
TRAF3IP1-204ENST00000462122 PYY3Q5JQD4 70 aa7.07□□□□□ -1.28
TRAF3IP1-204ENST00000462122 XP32Q5T750 250 aa7.07□□□□□ -1.28
TRAF3IP1-204ENST00000462122 FAM19A1Q7Z5A9 133 aa7.07□□□□□ -1.28
TRAF3IP1-204ENST00000462122 KRTAP13-1Q8IUC0 172 aa7.07□□□□□ -1.28
TRAF3IP1-204ENST00000462122 TNXBP22105 4242 aa7.06□□□□□ -1.28
TRAF3IP1-204ENST00000462122 SPRR1AP35321 89 aa7.06□□□□□ -1.28
TRAF3IP1-204ENST00000462122 MUSTN1Q8IVN3 82 aa7.06□□□□□ -1.28
TRAF3IP1-204ENST00000462122 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
TRAF3IP1-204ENST00000462122 PRLHP81277 87 aa7.05□□□□□ -1.28
TRAF3IP1-204ENST00000462122 C14orf144Q96I85 54 aa7.05□□□□□ -1.28
TRAF3IP1-204ENST00000462122 LINC01600Q96MT4 127 aa7.05□□□□□ -1.28
TRAF3IP1-204ENST00000462122 HERC1Q15751 4861 aa7.04□□□□□ -1.28
TRAF3IP1-204ENST00000462122 TRAV23DV6A0A075B6W5 121 aa7.04□□□□□ -1.28
TRAF3IP1-204ENST00000462122 ETDCA0A1B0GVM5 59 aa7.04□□□□□ -1.28
TRAF3IP1-204ENST00000462122 SLC25A34Q6PIV7 304 aa7.04□□□□□ -1.28
TRAF3IP1-204ENST00000462122 OR13C6PQ8NH95 151 aa7.04□□□□□ -1.28
TRAF3IP1-204ENST00000462122 KRTAP4-16G5E9R7 235 aaPredicted RBP7.03□□□□□ -1.28
TRAF3IP1-204ENST00000462122 ZNF73O43830 326 aaPredicted RBP7.02□□□□□ -1.29
TRAF3IP1-204ENST00000462122 HIST1H4GQ99525 98 aa7.02□□□□□ -1.29
TRAF3IP1-204ENST00000462122 HIGD1BQ9P298 99 aa7.02□□□□□ -1.29
TRAF3IP1-204ENST00000462122 TRAV13-2A0A0B4J235 113 aa7.01□□□□□ -1.29
TRAF3IP1-204ENST00000462122 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
TRAF3IP1-204ENST00000462122 HINT1P49773 126 aaPredicted RBP7.01□□□□□ -1.29
TRAF3IP1-204ENST00000462122 B5MCH6 92 aa7□□□□□ -1.29
TRAF3IP1-204ENST00000462122 MT1HL1P0DM35 61 aa7□□□□□ -1.29
TRAF3IP1-204ENST00000462122 HIGD2AQ9BW72 106 aa7□□□□□ -1.29
TRAF3IP1-204ENST00000462122 A6NDN8 102 aa6.99□□□□□ -1.29
TRAF3IP1-204ENST00000462122 Q6ZRX8 168 aa6.99□□□□□ -1.29
TRAF3IP1-204ENST00000462122 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
TRAF3IP1-204ENST00000462122 A4D1N5 150 aa6.98□□□□□ -1.29
TRAF3IP1-204ENST00000462122 KRTAP10-8P60410 259 aa6.98□□□□□ -1.29
TRAF3IP1-204ENST00000462122 ZNF706Q9Y5V0 76 aaPredicted RBP6.98□□□□□ -1.29
TRAF3IP1-204ENST00000462122 RPL13AP40429 203 aaKnown RBP6.97□□□□□ -1.29
TRAF3IP1-204ENST00000462122 SMCR5Q8TEV8 140 aa6.97□□□□□ -1.29
TRAF3IP1-204ENST00000462122 TAL2Q16559 108 aa6.96□□□□□ -1.3
TRAF3IP1-204ENST00000462122 PRR26Q8N8Z3 221 aa6.96□□□□□ -1.3
TRAF3IP1-204ENST00000462122 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
TRAF3IP1-204ENST00000462122 TRBV7-6A0A0J9YX20 115 aa6.95□□□□□ -1.3
TRAF3IP1-204ENST00000462122 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
TRAF3IP1-204ENST00000462122 CRYGAP11844 174 aa6.95□□□□□ -1.3
TRAF3IP1-204ENST00000462122 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
TRAF3IP1-204ENST00000462122 C6orf99Q4VX62 202 aa6.95□□□□□ -1.3
TRAF3IP1-204ENST00000462122 Q9BRP9 147 aa6.95□□□□□ -1.3
TRAF3IP1-204ENST00000462122 UQCR10Q9UDW1 63 aa6.95□□□□□ -1.3
TRAF3IP1-204ENST00000462122 COX7BP24311 80 aa6.94□□□□□ -1.3
TRAF3IP1-204ENST00000462122 ELOF1P60002 83 aaKnown RBP6.94□□□□□ -1.3
TRAF3IP1-204ENST00000462122 SPRR4Q96PI1 79 aa6.94□□□□□ -1.3
TRAF3IP1-204ENST00000462122 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
TRAF3IP1-204ENST00000462122 A6NJY4 79 aa6.93□□□□□ -1.3
TRAF3IP1-204ENST00000462122 CEND1Q8N111 149 aa6.93□□□□□ -1.3
TRAF3IP1-204ENST00000462122 DHRS4-AS1Q9P1J3 65 aa6.93□□□□□ -1.3
TRAF3IP1-204ENST00000462122 A0A087X002 238 aa6.92□□□□□ -1.3
TRAF3IP1-204ENST00000462122 A0A1B0GWB2 263 aa6.92□□□□□ -1.3
TRAF3IP1-204ENST00000462122 HSD52Q0P140 79 aa6.92□□□□□ -1.3
TRAF3IP1-204ENST00000462122 SMIM11BQ8TCY0 68 aa6.92□□□□□ -1.3
TRAF3IP1-204ENST00000462122 C12orf57Q99622 126 aa6.92□□□□□ -1.3
TRAF3IP1-204ENST00000462122 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
TRAF3IP1-204ENST00000462122 ERC2-IT1O76042 136 aa6.91□□□□□ -1.3
TRAF3IP1-204ENST00000462122 A0A0B4J2C4 111 aa6.9□□□□□ -1.3
TRAF3IP1-204ENST00000462122 CFC1BP0CG36 223 aa6.9□□□□□ -1.3
TRAF3IP1-204ENST00000462122 CFC1P0CG37 223 aa6.9□□□□□ -1.3
TRAF3IP1-204ENST00000462122 RAB37Q96AX2 223 aa6.9□□□□□ -1.3
TRAF3IP1-204ENST00000462122 LOC105371267A0A1B0GV96 52 aa6.89□□□□□ -1.31
TRAF3IP1-204ENST00000462122 VAMP3Q15836 100 aa6.89□□□□□ -1.31
TRAF3IP1-204ENST00000462122 LINC00483Q53H64 154 aa6.89□□□□□ -1.31
TRAF3IP1-204ENST00000462122 TYMSOSQ8TAI1 123 aa6.89□□□□□ -1.31
TRAF3IP1-204ENST00000462122 NHP2Q9NX24 153 aaKnown RBP6.89□□□□□ -1.31
TRAF3IP1-204ENST00000462122 FXYD2P54710 66 aa6.88□□□□□ -1.31
TRAF3IP1-204ENST00000462122 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
TRAF3IP1-204ENST00000462122 GAGE2AQ6NT46 116 aa6.88□□□□□ -1.31
TRAF3IP1-204ENST00000462122 BVES-AS1Q5T3Y7 98 aa6.87□□□□□ -1.31
TRAF3IP1-204ENST00000462122 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
TRAF3IP1-204ENST00000462122 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
TRAF3IP1-204ENST00000462122 SLC25A20O43772 301 aa6.86□□□□□ -1.31
TRAF3IP1-204ENST00000462122 H7C2G1 150 aa6.85□□□□□ -1.31
TRAF3IP1-204ENST00000462122 ST20-AS1Q8NBB2 130 aa6.85□□□□□ -1.31
TRAF3IP1-204ENST00000462122 KRTAP9-2Q9BYQ4 174 aa6.85□□□□□ -1.31
TRAF3IP1-204ENST00000462122 PRO1933Q9H354 126 aa6.85□□□□□ -1.31
TRAF3IP1-204ENST00000462122 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
TRAF3IP1-204ENST00000462122 SPRR1BP22528 89 aa6.84□□□□□ -1.31
TRAF3IP1-204ENST00000462122 C3orf22Q8N5N4 141 aa6.84□□□□□ -1.31
TRAF3IP1-204ENST00000462122 TSTD3H0UI37 97 aa6.83□□□□□ -1.32
TRAF3IP1-204ENST00000462122 Q1RN00 199 aa6.83□□□□□ -1.32
TRAF3IP1-204ENST00000462122 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
TRAF3IP1-204ENST00000462122 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
TRAF3IP1-204ENST00000462122 LINC00304Q8N9R0 145 aa6.82□□□□□ -1.32
TRAF3IP1-204ENST00000462122 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
TRAF3IP1-204ENST00000462122 IGLV9-49A0A0B4J1Y8 123 aa6.81□□□□□ -1.32
TRAF3IP1-204ENST00000462122 TEX49A0A1B0GTD5 131 aa6.81□□□□□ -1.32
TRAF3IP1-204ENST00000462122 hADV29S1A0JD25 119 aa6.81□□□□□ -1.32
TRAF3IP1-204ENST00000462122 H0YGX0 51 aa6.81□□□□□ -1.32
TRAF3IP1-204ENST00000462122 CTAG1AP78358 180 aa6.81□□□□□ -1.32
TRAF3IP1-204ENST00000462122 MOBPQ13875 183 aa6.8□□□□□ -1.32
TRAF3IP1-204ENST00000462122 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
TRAF3IP1-204ENST00000462122 LAMTOR3Q9UHA4 124 aa6.8□□□□□ -1.32
TRAF3IP1-204ENST00000462122 K7ERJ3 54 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms