RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 UBE2L6O14933 153 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 PPP1R17O96001 155 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 DEFB130BP0DP73 79 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 DEFB130AP0DP74 79 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 HTN3P15516 51 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 RBM3P98179 157 aaKnown RBP3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 Q6ZTI0 123 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 TOMM6Q96B49 74 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 SCGB3A1Q96QR1 104 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 NOP10Q9NPE3 64 aaKnown RBP3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
ATPAF1-203ENST00000460928 IGHV1OR15-1A0A075B7D0 117 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 IGKV3D-20A0A0C4DH25 116 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 LOC100131303A0A0U1RQF7 123 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 SH2D1AO60880 128 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 DNAL4O96015 105 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 IGHV3-53P01767 116 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 UBE2BP63146 152 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 Q1T7F1 81 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 ESRGQ1W209 222 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 C14orf177Q52M58 125 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 SFTA2Q6UW10 78 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 LYPD5Q6UWN5 251 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 PHF5AQ7RTV0 110 aaKnown RBP3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 C11orf72Q8NBR9 251 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
ATPAF1-203ENST00000460928 TRGV1A0A0A0MS02 117 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 SMKR1H3BMG3 65 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 COX7A2LO14548 114 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 LEPROTO15243 131 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 MIFP14174 115 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 LYZL1Q6UWQ5 148 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 C20orf197Q8N268 126 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 RNF185Q96GF1 192 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 TMEM141Q96I45 108 aa3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 C11orf68Q9H3H3 251 aaKnown RBP3.25□□□□□ -1.89
ATPAF1-203ENST00000460928 IGHV3-73A0A0B4J1V6 119 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 TRAV21A0A0B4J279 112 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 M0R381 172 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 RNASE3P12724 160 aaKnown RBP3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 OBSCN-AS1Q96MR7 158 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 AMELXQ99217 191 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 TIMM17AQ99595 171 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 SMIM2Q9BVW6 85 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 KMT2AQ03164 3969 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 DNAH10Q8IVF4 4471 aa3.24□□□□□ -1.89
ATPAF1-203ENST00000460928 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
ATPAF1-203ENST00000460928 IGIPA6NJ69 53 aa3.23□□□□□ -1.89
ATPAF1-203ENST00000460928 M0R378 163 aa3.23□□□□□ -1.89
ATPAF1-203ENST00000460928 SPART-AS1P0CW21 52 aa3.23□□□□□ -1.89
ATPAF1-203ENST00000460928 KRTAP7-1Q8IUC3 87 aa3.23□□□□□ -1.89
ATPAF1-203ENST00000460928 MUSTN1Q8IVN3 82 aa3.23□□□□□ -1.89
ATPAF1-203ENST00000460928 C16orf74Q96GX8 76 aa3.23□□□□□ -1.89
ATPAF1-203ENST00000460928 LENEPQ9Y5L5 61 aa3.23□□□□□ -1.89
ATPAF1-203ENST00000460928 DEFB131BA0A096LNP1 70 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 A0A096LPF7 62 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 KRTAP16-1A8MUX0 517 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 C8orf87E5RJ46 101 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 F8WEM9 126 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 I3L3M4 83 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 SS18Q15532 418 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 LCA10Q71F78 164 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 C6orf223Q8N319 242 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 LINC00467Q9BRT7 94 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
ATPAF1-203ENST00000460928 IGLV4-69A0A075B6H9 119 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 TRGV2A0A075B6R0 118 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 TRAV8-3A0A0A6YYJ7 113 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 ZNF73O43830 326 aaPredicted RBP3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 BAALC-AS2P0C853 105 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 CXCL6P80162 114 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 MIAQ16674 131 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 C2orf66Q6UXQ4 117 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 DEFB104AQ8WTQ1 72 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 LINC00474Q9P2X8 69 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 APLNQ9ULZ1 77 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 DNAH17Q9UFH2 4485 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 DNAH2Q9P225 4427 aa3.21□□□□□ -1.9
ATPAF1-203ENST00000460928 TRAV10A0A0B4J240 114 aa3.2□□□□□ -1.9
ATPAF1-203ENST00000460928 TMEM256-PLSCR3K7ERE1 68 aa3.2□□□□□ -1.9
ATPAF1-203ENST00000460928 S100A4P26447 101 aaKnown RBP3.2□□□□□ -1.9
ATPAF1-203ENST00000460928 ATP11AUNQ6ZP68 121 aa3.2□□□□□ -1.9
ATPAF1-203ENST00000460928 C7orf65Q6ZTY9 151 aa3.2□□□□□ -1.9
ATPAF1-203ENST00000460928 C14orf178Q8N769 122 aaPredicted RBP3.2□□□□□ -1.9
ATPAF1-203ENST00000460928 PHLDA3Q9Y5J5 127 aa3.2□□□□□ -1.9
ATPAF1-203ENST00000460928 JMJD7-PLA2G4BH0Y9G9 81 aa3.19□□□□□ -1.9
ATPAF1-203ENST00000460928 H7C2G1 150 aa3.19□□□□□ -1.9
ATPAF1-203ENST00000460928 LY6G6CO95867 125 aa3.19□□□□□ -1.9
ATPAF1-203ENST00000460928 UBE2AP49459 152 aa3.19□□□□□ -1.9
ATPAF1-203ENST00000460928 FAM74A4Q5TZK3 123 aa3.19□□□□□ -1.9
ATPAF1-203ENST00000460928 CLEC2BQ92478 149 aa3.19□□□□□ -1.9
ATPAF1-203ENST00000460928 TRGV4A0A0C4DH28 118 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 IGKV3D-7A0A0C4DH55 119 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 TRBV7-4A0A0J9YYF1 115 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 NUPR2A6NF83 97 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 M0R2N4 97 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 RPL28P46779 137 aaKnown RBP3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 TSPEAR-AS2P59090 65 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms