RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.51□□□□□ -2.17
HPS3-203ENST00000460822 TRAV12-2A0A075B6T6 113 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 IGKV2-29A2NJV5 120 aaPredicted RBP1.51□□□□□ -2.17
HPS3-203ENST00000460822 DNAL4O96015 105 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 FUSP35637 526 aaKnown RBP eCLIP1.51□□□□□ -2.17
HPS3-203ENST00000460822 CIRBPQ14011 172 aaKnown RBP1.51□□□□□ -2.17
HPS3-203ENST00000460822 Q6ZQT0 140 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 C5orf56Q8N8D9 126 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 COPS9Q8WXC6 57 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 LINC00846Q9NV44 126 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 CDKN2A-AS1Q9UH64 79 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 GVINP1Q7Z2Y8 2422 aa1.51□□□□□ -2.17
HPS3-203ENST00000460822 SPTAN1Q13813 2472 aaKnown RBP1.51□□□□□ -2.17
HPS3-203ENST00000460822 PTPRZ1P23471 2315 aaPredicted RBP1.51□□□□□ -2.17
HPS3-203ENST00000460822 EP300Q09472 2414 aaPredicted RBP1.51□□□□□ -2.17
HPS3-203ENST00000460822 TLN1Q9Y490 2541 aaKnown RBP1.51□□□□□ -2.17
HPS3-203ENST00000460822 AKAP6Q13023 2319 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 OTOGLQ3ZCN5 2332 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 COX6A2Q02221 97 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 PHF5AQ7RTV0 110 aaKnown RBP1.5□□□□□ -2.17
HPS3-203ENST00000460822 ZNF625Q96I27 306 aaPredicted RBP1.5□□□□□ -2.17
HPS3-203ENST00000460822 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 LINC00467Q9BRT7 94 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 RHPN1-AS1Q9BWJ2 59 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 C14orf132Q9NPU4 83 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 SPTA1P02549 2419 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 ZNF292O60281 2723 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 TRAV13-2A0A0B4J235 113 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 CRPP02741 224 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 P0C880 135 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 SS18Q15532 418 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 SPINK13Q1W4C9 94 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 C10orf105Q8TEF2 133 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 C20orf166-AS1Q96NR2 134 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 PRO2289Q9P1D8 64 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 CELSR2Q9HCU4 2923 aa1.5□□□□□ -2.17
HPS3-203ENST00000460822 H3BUA1 57 aa1.49□□□□□ -2.17
HPS3-203ENST00000460822 NCR3O14931 201 aa1.49□□□□□ -2.17
HPS3-203ENST00000460822 SMIM11BQ8TCY0 68 aa1.49□□□□□ -2.17
HPS3-203ENST00000460822 USMG5Q96IX5 58 aa1.49□□□□□ -2.17
HPS3-203ENST00000460822 MAP1AP78559 2803 aaPredicted RBP1.49□□□□□ -2.17
HPS3-203ENST00000460822 NBASA2RRP1 2371 aa1.49□□□□□ -2.17
HPS3-203ENST00000460822 H0YGX0 51 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 H7BZZ5 65 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 SNRPD3P62318 126 aaKnown RBP1.48□□□□□ -2.17
HPS3-203ENST00000460822 ATP5EP2Q5VTU8 51 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 LYPD5Q6UWN5 251 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 C20orf197Q8N268 126 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 DEFB124Q8NES8 71 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 WFDC9Q8NEX5 89 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 SERP1Q9Y6X1 66 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 CUBNO60494 3623 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 TRAV23DV6A0A075B6W5 121 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 TRBV10-3A0A0K0K1G6 114 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 CCKP06307 115 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 S100A7L2Q5SY68 101 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 Q6ZTI0 123 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 FP248Q71RG6 208 aaPredicted RBP1.48□□□□□ -2.17
HPS3-203ENST00000460822 PRO3102Q9H379 93 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 ORMDL1Q9P0S3 153 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 HIVEP3Q5T1R4 2406 aa1.48□□□□□ -2.17
HPS3-203ENST00000460822 TRBV7-6A0A0J9YX20 115 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 A8MTW9 85 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 JMJD7-PLA2G4BH0Y9G9 81 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 HTN1P15515 57 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 CCL18P55774 89 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 KLKP1Q107X0 134 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 ESRGQ1W209 222 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 ENHOQ6UWT2 76 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 BRD3OSQ6XYD6 125 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 COX7B2Q8TF08 81 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 CDC42SE2Q9NRR3 84 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 CREBBPQ92793 2442 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 C2CD3Q4AC94 2353 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 CSPG4Q6UVK1 2322 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 A0A0G2JQZ4 141 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 TRBV6-4A0A1B0GX49 114 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 IBA57-AS1B1ANH7 110 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 F8WEM9 126 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 H3BUX3 64 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 BCE1O60756 84 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 LINC00158P58513 81 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 BLCAPP62952 87 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 C9orf163Q8N9P6 203 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 BRK1Q8WUW1 75 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 UBL5Q9BZL1 73 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 BPESC1Q9GZL8 116 aa1.47□□□□□ -2.17
HPS3-203ENST00000460822 CEP295Q9C0D2 2601 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 PKD1L2Q7Z442 2459 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 MXRA5Q9NR99 2828 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 CR1P17927 2039 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 A0A096LNT2 108 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 TRBV10-1A0A0K0K1A3 114 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 IGKV4-1P06312 121 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 ATP5EP56381 51 aaPredicted RBP1.46□□□□□ -2.18
HPS3-203ENST00000460822 C10orf99Q6UWK7 81 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 Q8N814 137 aa1.46□□□□□ -2.18
HPS3-203ENST00000460822 TOMM7Q9P0U1 55 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms