RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 ANAPC11Q9NYG5 84 aa12.74□□□□□ -0.37
ABCD4-202ENST00000460308 TRAV23DV6A0A075B6W5 121 aa12.73□□□□□ -0.37
ABCD4-202ENST00000460308 KRTAP4-16G5E9R7 235 aaPredicted RBP12.73□□□□□ -0.37
ABCD4-202ENST00000460308 IFITM1P13164 125 aa12.73□□□□□ -0.37
ABCD4-202ENST00000460308 LINC00518Q8N0U6 118 aa12.73□□□□□ -0.37
ABCD4-202ENST00000460308 A0A087X002 238 aa12.71□□□□□ -0.37
ABCD4-202ENST00000460308 FAM229BQ4G0N7 80 aa12.71□□□□□ -0.37
ABCD4-202ENST00000460308 B5MCH6 92 aa12.7□□□□□ -0.38
ABCD4-202ENST00000460308 TYMSOSQ8TAI1 123 aa12.7□□□□□ -0.38
ABCD4-202ENST00000460308 SMCR5Q8TEV8 140 aa12.7□□□□□ -0.38
ABCD4-202ENST00000460308 ZNF706Q9Y5V0 76 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-202ENST00000460308 ZNF73O43830 326 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-202ENST00000460308 HINT1P49773 126 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-202ENST00000460308 MUSTN1Q8IVN3 82 aa12.69□□□□□ -0.38
ABCD4-202ENST00000460308 JOSD1Q15040 202 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-202ENST00000460308 PPDPFQ9H3Y8 114 aa12.67□□□□□ -0.38
ABCD4-202ENST00000460308 Q6ZRX8 168 aa12.66□□□□□ -0.38
ABCD4-202ENST00000460308 SPRR4Q96PI1 79 aa12.66□□□□□ -0.38
ABCD4-202ENST00000460308 A6NDN8 102 aa12.62□□□□□ -0.39
ABCD4-202ENST00000460308 KRTAP13-2Q52LG2 175 aa12.62□□□□□ -0.39
ABCD4-202ENST00000460308 Q9BRP9 147 aa12.61□□□□□ -0.39
ABCD4-202ENST00000460308 HMCN2Q8NDA2 5059 aa12.61□□□□□ -0.39
ABCD4-202ENST00000460308 COX8AP10176 69 aa12.6□□□□□ -0.39
ABCD4-202ENST00000460308 TMA7Q9Y2S6 64 aaKnown RBP12.6□□□□□ -0.39
ABCD4-202ENST00000460308 ERC2-IT1O76042 136 aa12.59□□□□□ -0.39
ABCD4-202ENST00000460308 PAM16Q9Y3D7 125 aa12.59□□□□□ -0.39
ABCD4-202ENST00000460308 GAGE2AQ6NT46 116 aa12.58□□□□□ -0.4
ABCD4-202ENST00000460308 VAMP8Q9BV40 100 aa12.58□□□□□ -0.4
ABCD4-202ENST00000460308 TRAV13-2A0A0B4J235 113 aa12.57□□□□□ -0.4
ABCD4-202ENST00000460308 SPATA45Q537H7 98 aa12.57□□□□□ -0.4
ABCD4-202ENST00000460308 DLEU1O43261 78 aa12.56□□□□□ -0.4
ABCD4-202ENST00000460308 TSPAN13O95857 204 aa12.56□□□□□ -0.4
ABCD4-202ENST00000460308 C6orf99Q4VX62 202 aa12.56□□□□□ -0.4
ABCD4-202ENST00000460308 C3orf22Q8N5N4 141 aa12.56□□□□□ -0.4
ABCD4-202ENST00000460308 C14orf144Q96I85 54 aa12.55□□□□□ -0.4
ABCD4-202ENST00000460308 HIST1H4GQ99525 98 aa12.55□□□□□ -0.4
ABCD4-202ENST00000460308 COX7BP24311 80 aa12.54□□□□□ -0.4
ABCD4-202ENST00000460308 LINC00304Q8N9R0 145 aa12.54□□□□□ -0.4
ABCD4-202ENST00000460308 DHRS4-AS1Q9P1J3 65 aa12.54□□□□□ -0.4
ABCD4-202ENST00000460308 LINC00483Q53H64 154 aa12.53□□□□□ -0.4
ABCD4-202ENST00000460308 A4D1N5 150 aa12.52□□□□□ -0.41
ABCD4-202ENST00000460308 TRBV7-6A0A0J9YX20 115 aa12.5□□□□□ -0.41
ABCD4-202ENST00000460308 ELOF1P60002 83 aaKnown RBP12.5□□□□□ -0.41
ABCD4-202ENST00000460308 SLC25A34Q6PIV7 304 aa12.5□□□□□ -0.41
ABCD4-202ENST00000460308 A0A1B0GWB2 263 aa12.48□□□□□ -0.41
ABCD4-202ENST00000460308 ST20-AS1Q8NBB2 130 aa12.47□□□□□ -0.41
ABCD4-202ENST00000460308 IGLV9-49A0A0B4J1Y8 123 aa12.46□□□□□ -0.41
ABCD4-202ENST00000460308 C4orf48Q5BLP8 95 aa12.46□□□□□ -0.41
ABCD4-202ENST00000460308 SMIM11BQ8TCY0 68 aa12.46□□□□□ -0.41
ABCD4-202ENST00000460308 HIGD1BQ9P298 99 aa12.46□□□□□ -0.41
ABCD4-202ENST00000460308 PRR4Q16378 134 aa12.45□□□□□ -0.42
ABCD4-202ENST00000460308 PYY3Q5JQD4 70 aa12.45□□□□□ -0.42
ABCD4-202ENST00000460308 SPAG11AQ6PDA7 123 aa12.44□□□□□ -0.42
ABCD4-202ENST00000460308 VAMP3Q15836 100 aa12.43□□□□□ -0.42
ABCD4-202ENST00000460308 C12orf57Q99622 126 aa12.43□□□□□ -0.42
ABCD4-202ENST00000460308 CTAG1AP78358 180 aa12.42□□□□□ -0.42
ABCD4-202ENST00000460308 MOBPQ13875 183 aa12.42□□□□□ -0.42
ABCD4-202ENST00000460308 Q8NBF4 154 aa12.42□□□□□ -0.42
ABCD4-202ENST00000460308 TAL2Q16559 108 aa12.41□□□□□ -0.42
ABCD4-202ENST00000460308 SSBP3-AS1Q7Z2R9 100 aa12.41□□□□□ -0.42
ABCD4-202ENST00000460308 C9orf153Q5TBE3 101 aa12.39□□□□□ -0.43
ABCD4-202ENST00000460308 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
ABCD4-202ENST00000460308 DEFB105AQ8NG35 78 aa12.39□□□□□ -0.43
ABCD4-202ENST00000460308 NHP2Q9NX24 153 aaKnown RBP12.39□□□□□ -0.43
ABCD4-202ENST00000460308 SLC25A20O43772 301 aa12.37□□□□□ -0.43
ABCD4-202ENST00000460308 SPRR1BP22528 89 aa12.37□□□□□ -0.43
ABCD4-202ENST00000460308 LAMTOR3Q9UHA4 124 aa12.37□□□□□ -0.43
ABCD4-202ENST00000460308 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
ABCD4-202ENST00000460308 TEX49A0A1B0GTD5 131 aa12.34□□□□□ -0.43
ABCD4-202ENST00000460308 CFC1BP0CG36 223 aa12.34□□□□□ -0.43
ABCD4-202ENST00000460308 CFC1P0CG37 223 aa12.34□□□□□ -0.43
ABCD4-202ENST00000460308 CEND1Q8N111 149 aa12.34□□□□□ -0.43
ABCD4-202ENST00000460308 TMEM238LA0A1B0GVL6 79 aa12.32□□□□□ -0.44
ABCD4-202ENST00000460308 A6NJY4 79 aa12.32□□□□□ -0.44
ABCD4-202ENST00000460308 H7C2G1 150 aa12.32□□□□□ -0.44
ABCD4-202ENST00000460308 SPINK1P00995 79 aa12.32□□□□□ -0.44
ABCD4-202ENST00000460308 RETNLBQ9BQ08 111 aa12.32□□□□□ -0.44
ABCD4-202ENST00000460308 BVES-AS1Q5T3Y7 98 aa12.31□□□□□ -0.44
ABCD4-202ENST00000460308 A0A0B4J2C4 111 aa12.3□□□□□ -0.44
ABCD4-202ENST00000460308 LINC00575Q6W349 94 aa12.3□□□□□ -0.44
ABCD4-202ENST00000460308 UBR4Q5T4S7 5183 aa12.3□□□□□ -0.44
ABCD4-202ENST00000460308 Q1RN00 199 aa12.29□□□□□ -0.44
ABCD4-202ENST00000460308 LRP2P98164 4655 aa12.29□□□□□ -0.44
ABCD4-202ENST00000460308 hADV29S1A0JD25 119 aa12.28□□□□□ -0.44
ABCD4-202ENST00000460308 IGLV5-48A0A075B6I7 105 aa12.27□□□□□ -0.45
ABCD4-202ENST00000460308 UQCR10Q9UDW1 63 aa12.27□□□□□ -0.45
ABCD4-202ENST00000460308 LINC01547P58512 204 aaPredicted RBP12.25□□□□□ -0.45
ABCD4-202ENST00000460308 HSD52Q0P140 79 aa12.25□□□□□ -0.45
ABCD4-202ENST00000460308 FXYD2P54710 66 aa12.24□□□□□ -0.45
ABCD4-202ENST00000460308 RPS29P62273 56 aaKnown RBP12.23□□□□□ -0.45
ABCD4-202ENST00000460308 PRO1854Q9UHT4 67 aa12.23□□□□□ -0.45
ABCD4-202ENST00000460308 IGLV7-46A0A075B6I9 117 aa12.22□□□□□ -0.45
ABCD4-202ENST00000460308 Q6ZQY7 126 aa12.22□□□□□ -0.45
ABCD4-202ENST00000460308 SMIM29Q86T20 159 aa12.22□□□□□ -0.45
ABCD4-202ENST00000460308 Q8N377 158 aa12.22□□□□□ -0.45
ABCD4-202ENST00000460308 LPAP08519 4548 aa12.22□□□□□ -0.45
ABCD4-202ENST00000460308 SNCGO76070 127 aa12.21□□□□□ -0.45
ABCD4-202ENST00000460308 PRO1933Q9H354 126 aa12.21□□□□□ -0.45
ABCD4-202ENST00000460308 H0YGX0 51 aa12.19□□□□□ -0.46
ABCD4-202ENST00000460308 HRCT1Q6UXD1 115 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms