RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 KIAA0087Q14695 138 aa10.4□□□□□ -0.74
LMNB1-203ENST00000460265 TM2D3Q9BRN9 247 aa10.4□□□□□ -0.74
LMNB1-203ENST00000460265 BCE1O60756 84 aa10.39□□□□□ -0.75
LMNB1-203ENST00000460265 STAB2Q8WWQ8 2551 aa10.39□□□□□ -0.75
LMNB1-203ENST00000460265 ATP5EP56381 51 aaPredicted RBP10.38□□□□□ -0.75
LMNB1-203ENST00000460265 Q6ZVQ6 151 aa10.38□□□□□ -0.75
LMNB1-203ENST00000460265 COX17Q14061 63 aa10.37□□□□□ -0.75
LMNB1-203ENST00000460265 DEFB105AQ8NG35 78 aa10.36□□□□□ -0.75
LMNB1-203ENST00000460265 FAM229BQ4G0N7 80 aa10.35□□□□□ -0.75
LMNB1-203ENST00000460265 M0R2N4 97 aa10.35□□□□□ -0.75
LMNB1-203ENST00000460265 Q6ZQY7 126 aa10.35□□□□□ -0.75
LMNB1-203ENST00000460265 NKAPP1Q8N9T2 125 aa10.35□□□□□ -0.75
LMNB1-203ENST00000460265 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
LMNB1-203ENST00000460265 TMEM254Q8TBM7 123 aa10.34□□□□□ -0.75
LMNB1-203ENST00000460265 NREPQ16612 68 aa10.34□□□□□ -0.75
LMNB1-203ENST00000460265 Q6ZRU5 148 aa10.34□□□□□ -0.75
LMNB1-203ENST00000460265 Q6ZQT0 140 aa10.33□□□□□ -0.76
LMNB1-203ENST00000460265 DIRC1Q969H9 104 aa10.32□□□□□ -0.76
LMNB1-203ENST00000460265 PMAIP1Q13794 54 aa10.32□□□□□ -0.76
LMNB1-203ENST00000460265 UBE2DNLQ8IWF7 75 aa10.32□□□□□ -0.76
LMNB1-203ENST00000460265 LRCOL1A6NCL2 159 aa10.31□□□□□ -0.76
LMNB1-203ENST00000460265 FUSP35637 526 aaKnown RBP eCLIP10.31□□□□□ -0.76
LMNB1-203ENST00000460265 PSCAO43653 123 aa10.31□□□□□ -0.76
LMNB1-203ENST00000460265 SYCNQ0VAF6 134 aa10.3□□□□□ -0.76
LMNB1-203ENST00000460265 Q8NDZ9 215 aa10.3□□□□□ -0.76
LMNB1-203ENST00000460265 LINC00167Q96N53 147 aa10.3□□□□□ -0.76
LMNB1-203ENST00000460265 BPY2O14599 106 aa10.29□□□□□ -0.76
LMNB1-203ENST00000460265 PRR34Q9NV39 138 aa10.28□□□□□ -0.76
LMNB1-203ENST00000460265 TRBV7-4A0A0J9YYF1 115 aa10.27□□□□□ -0.76
LMNB1-203ENST00000460265 RPL37AP8A6NKH3 93 aa10.27□□□□□ -0.77
LMNB1-203ENST00000460265 COX7BP24311 80 aa10.27□□□□□ -0.77
LMNB1-203ENST00000460265 CXCL6P80162 114 aa10.27□□□□□ -0.77
LMNB1-203ENST00000460265 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
LMNB1-203ENST00000460265 IGKV2-24A0A0C4DH68 120 aa10.25□□□□□ -0.77
LMNB1-203ENST00000460265 PRYO14603 147 aa10.25□□□□□ -0.77
LMNB1-203ENST00000460265 LINC00575Q6W349 94 aa10.24□□□□□ -0.77
LMNB1-203ENST00000460265 Q8N9L7 120 aa10.24□□□□□ -0.77
LMNB1-203ENST00000460265 LOC110117498A0A087WWA1 95 aa10.23□□□□□ -0.77
LMNB1-203ENST00000460265 PDE6GP18545 87 aa10.22□□□□□ -0.77
LMNB1-203ENST00000460265 EGFEM1PQ0D2K5 195 aa10.22□□□□□ -0.77
LMNB1-203ENST00000460265 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.22□□□□□ -0.77
LMNB1-203ENST00000460265 TENM2Q9NT68 2774 aa10.21□□□□□ -0.77
LMNB1-203ENST00000460265 MUC7Q8TAX7 377 aa10.2□□□□□ -0.78
LMNB1-203ENST00000460265 HIGD2AQ9BW72 106 aa10.2□□□□□ -0.78
LMNB1-203ENST00000460265 M0R378 163 aa10.19□□□□□ -0.78
LMNB1-203ENST00000460265 PSPHP1O15172 72 aa10.19□□□□□ -0.78
LMNB1-203ENST00000460265 Q6ZRP5 223 aa10.19□□□□□ -0.78
LMNB1-203ENST00000460265 LINC01556Q5JQF7 62 aa10.19□□□□□ -0.78
LMNB1-203ENST00000460265 LINC00588Q9Y4M8 146 aa10.19□□□□□ -0.78
LMNB1-203ENST00000460265 C15orf56Q8N910 161 aa10.18□□□□□ -0.78
LMNB1-203ENST00000460265 ETDCA0A1B0GVM5 59 aa10.17□□□□□ -0.78
LMNB1-203ENST00000460265 H3BNG1 76 aa10.17□□□□□ -0.78
LMNB1-203ENST00000460265 UBE2BP63146 152 aa10.17□□□□□ -0.78
LMNB1-203ENST00000460265 CASC10Q5T4H9 136 aa10.17□□□□□ -0.78
LMNB1-203ENST00000460265 K7EIL1 84 aa10.16□□□□□ -0.78
LMNB1-203ENST00000460265 PRR15Q8IV56 129 aa10.16□□□□□ -0.78
LMNB1-203ENST00000460265 IGLV6-57P01721 117 aa10.14□□□□□ -0.79
LMNB1-203ENST00000460265 ERC2-IT1O76042 136 aa10.13□□□□□ -0.79
LMNB1-203ENST00000460265 FAM168BA1KXE4 195 aa10.13□□□□□ -0.79
LMNB1-203ENST00000460265 VPREB1P12018 145 aa10.13□□□□□ -0.79
LMNB1-203ENST00000460265 C3orf84H3BNL1 204 aa10.11□□□□□ -0.79
LMNB1-203ENST00000460265 PRR4Q16378 134 aa10.1□□□□□ -0.79
LMNB1-203ENST00000460265 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
LMNB1-203ENST00000460265 SERTAD4-AS1Q5TG53 156 aa10.1□□□□□ -0.79
LMNB1-203ENST00000460265 FAM30AQ9NZY2 134 aa10.1□□□□□ -0.79
LMNB1-203ENST00000460265 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
LMNB1-203ENST00000460265 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.09□□□□□ -0.79
LMNB1-203ENST00000460265 OCR1Q9BZK8 76 aa10.08□□□□□ -0.8
LMNB1-203ENST00000460265 DNAH10OSP0CZ25 163 aa10.07□□□□□ -0.8
LMNB1-203ENST00000460265 MRPL55Q7Z7F7 128 aaKnown RBP10.07□□□□□ -0.8
LMNB1-203ENST00000460265 hDV103S1A0JD37 113 aa10.07□□□□□ -0.8
LMNB1-203ENST00000460265 C1orf64Q8NEQ6 169 aa10.06□□□□□ -0.8
LMNB1-203ENST00000460265 H3BQ85 93 aa10.06□□□□□ -0.8
LMNB1-203ENST00000460265 CD164Q04900 197 aa10.06□□□□□ -0.8
LMNB1-203ENST00000460265 IGKV4-1P06312 121 aa10.05□□□□□ -0.8
LMNB1-203ENST00000460265 ELOF1P60002 83 aaKnown RBP10.04□□□□□ -0.8
LMNB1-203ENST00000460265 KRTAP26-1Q6PEX3 210 aa10.03□□□□□ -0.8
LMNB1-203ENST00000460265 A0A096LNI7 61 aa10.02□□□□□ -0.8
LMNB1-203ENST00000460265 TRAV22A0A0B4J277 110 aa10.02□□□□□ -0.8
LMNB1-203ENST00000460265 Q1T7F1 81 aa10.02□□□□□ -0.81
LMNB1-203ENST00000460265 MDFIQ99750 246 aa10.01□□□□□ -0.81
LMNB1-203ENST00000460265 SMIM29Q86T20 159 aa10.01□□□□□ -0.81
LMNB1-203ENST00000460265 A8MUN3 132 aa10.01□□□□□ -0.81
LMNB1-203ENST00000460265 SPTSSBQ8NFR3 76 aa10□□□□□ -0.81
LMNB1-203ENST00000460265 ST20-AS1Q8NBB2 130 aa9.99□□□□□ -0.81
LMNB1-203ENST00000460265 PRLHP81277 87 aa9.98□□□□□ -0.81
LMNB1-203ENST00000460265 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
LMNB1-203ENST00000460265 CHTF8P0CG12 524 aa9.96□□□□□ -0.81
LMNB1-203ENST00000460265 A8MU10 97 aa9.94□□□□□ -0.82
LMNB1-203ENST00000460265 CHKB-CPT1BH3BT56 60 aa9.94□□□□□ -0.82
LMNB1-203ENST00000460265 DHRS4-AS1Q9P1J3 65 aa9.93□□□□□ -0.82
LMNB1-203ENST00000460265 A0A0G2JQZ4 141 aa9.92□□□□□ -0.82
LMNB1-203ENST00000460265 A0A1W2PNN7 141 aa9.92□□□□□ -0.82
LMNB1-203ENST00000460265 REG3GQ6UW15 175 aa9.91□□□□□ -0.82
LMNB1-203ENST00000460265 C1orf137Q5JT78 98 aa9.91□□□□□ -0.82
LMNB1-203ENST00000460265 KCNQ1DNQ9H478 68 aa9.9□□□□□ -0.82
LMNB1-203ENST00000460265 UBE2AP49459 152 aa9.9□□□□□ -0.82
LMNB1-203ENST00000460265 Q6ZRX8 168 aa9.9□□□□□ -0.82
LMNB1-203ENST00000460265 KRTAP1-5Q9BYS1 174 aa9.9□□□□□ -0.83
LMNB1-203ENST00000460265 DEFB116Q30KQ4 102 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms