RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
HPS3-202ENST00000460120 MGAM2Q2M2H8 2515 aa11.86□□□□□ -0.51
HPS3-202ENST00000460120 LOC110117498A0A087WWA1 95 aa11.85□□□□□ -0.51
HPS3-202ENST00000460120 Q6ZVQ6 151 aa11.85□□□□□ -0.51
HPS3-202ENST00000460120 CRYGAP11844 174 aa11.84□□□□□ -0.51
HPS3-202ENST00000460120 LINC00528Q8N1L1 170 aa11.84□□□□□ -0.51
HPS3-202ENST00000460120 C7orf33Q8WU49 177 aa11.84□□□□□ -0.51
HPS3-202ENST00000460120 DNAH10OSP0CZ25 163 aa11.84□□□□□ -0.51
HPS3-202ENST00000460120 TRAV10A0A0B4J240 114 aa11.83□□□□□ -0.52
HPS3-202ENST00000460120 Q5XG85 94 aa11.83□□□□□ -0.52
HPS3-202ENST00000460120 GHRHP01286 108 aa11.83□□□□□ -0.52
HPS3-202ENST00000460120 LINC01547P58512 204 aaPredicted RBP11.82□□□□□ -0.52
HPS3-202ENST00000460120 LYSTQ99698 3801 aa11.82□□□□□ -0.52
HPS3-202ENST00000460120 DNAH3Q8TD57 4116 aa11.82□□□□□ -0.52
HPS3-202ENST00000460120 SERP2Q8N6R1 65 aa11.8□□□□□ -0.52
HPS3-202ENST00000460120 K7EIL1 84 aa11.8□□□□□ -0.52
HPS3-202ENST00000460120 ATP5EP2Q5VTU8 51 aa11.8□□□□□ -0.52
HPS3-202ENST00000460120 TRBV7-4A0A0J9YYF1 115 aa11.77□□□□□ -0.52
HPS3-202ENST00000460120 TRBV7-6A0A0J9YX20 115 aa11.76□□□□□ -0.53
HPS3-202ENST00000460120 C3orf84H3BNL1 204 aa11.75□□□□□ -0.53
HPS3-202ENST00000460120 HUWE1Q7Z6Z7 4374 aaKnown RBP11.75□□□□□ -0.53
HPS3-202ENST00000460120 Q8N9L7 120 aa11.74□□□□□ -0.53
HPS3-202ENST00000460120 STAB2Q8WWQ8 2551 aa11.74□□□□□ -0.53
HPS3-202ENST00000460120 TM2D3Q9BRN9 247 aa11.73□□□□□ -0.53
HPS3-202ENST00000460120 PDE6GP18545 87 aa11.73□□□□□ -0.53
HPS3-202ENST00000460120 TMEM258P61165 79 aa11.73□□□□□ -0.53
HPS3-202ENST00000460120 KCNQ1DNQ9H478 68 aa11.73□□□□□ -0.53
HPS3-202ENST00000460120 ST20-AS1Q8NBB2 130 aa11.73□□□□□ -0.53
HPS3-202ENST00000460120 H3BQ85 93 aa11.72□□□□□ -0.53
HPS3-202ENST00000460120 KRTAP7-1Q8IUC3 87 aa11.72□□□□□ -0.53
HPS3-202ENST00000460120 CSMD3Q7Z407 3707 aa11.71□□□□□ -0.54
HPS3-202ENST00000460120 ETDCA0A1B0GVM5 59 aa11.7□□□□□ -0.54
HPS3-202ENST00000460120 Q8N377 158 aa11.7□□□□□ -0.54
HPS3-202ENST00000460120 COL7A1Q02388 2944 aa11.7□□□□□ -0.54
HPS3-202ENST00000460120 IGKV2-24A0A0C4DH68 120 aa11.7□□□□□ -0.54
HPS3-202ENST00000460120 C20orf197Q8N268 126 aa11.7□□□□□ -0.54
HPS3-202ENST00000460120 Q9BRP9 147 aa11.7□□□□□ -0.54
HPS3-202ENST00000460120 DNAH10Q8IVF4 4471 aa11.7□□□□□ -0.54
HPS3-202ENST00000460120 TENM2Q9NT68 2774 aa11.68□□□□□ -0.54
HPS3-202ENST00000460120 KRTAP1-5Q9BYS1 174 aa11.67□□□□□ -0.54
HPS3-202ENST00000460120 IGLV1-50A0A075B6I6 118 aa11.67□□□□□ -0.54
HPS3-202ENST00000460120 F8WDY8 70 aa11.67□□□□□ -0.54
HPS3-202ENST00000460120 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
HPS3-202ENST00000460120 Q6ZRX8 168 aa11.66□□□□□ -0.54
HPS3-202ENST00000460120 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.66□□□□□ -0.54
HPS3-202ENST00000460120 ERC2-IT1O76042 136 aa11.66□□□□□ -0.54
HPS3-202ENST00000460120 UBE2BP63146 152 aa11.66□□□□□ -0.54
HPS3-202ENST00000460120 DNAH1Q9P2D7 4330 aa11.66□□□□□ -0.54
HPS3-202ENST00000460120 RMI2Q96E14 147 aa11.66□□□□□ -0.54
HPS3-202ENST00000460120 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
HPS3-202ENST00000460120 TLX1NBP0CAT3 122 aa11.65□□□□□ -0.54
HPS3-202ENST00000460120 MRPL55Q7Z7F7 128 aaKnown RBP11.65□□□□□ -0.54
HPS3-202ENST00000460120 PSCAO43653 123 aa11.64□□□□□ -0.55
HPS3-202ENST00000460120 CXCL6P80162 114 aa11.63□□□□□ -0.55
HPS3-202ENST00000460120 NREPQ16612 68 aa11.63□□□□□ -0.55
HPS3-202ENST00000460120 PRO0628Q9UI54 55 aa11.63□□□□□ -0.55
HPS3-202ENST00000460120 A0A0G2JQZ4 141 aa11.62□□□□□ -0.55
HPS3-202ENST00000460120 A0A1W2PNN7 141 aa11.62□□□□□ -0.55
HPS3-202ENST00000460120 BPY2O14599 106 aa11.62□□□□□ -0.55
HPS3-202ENST00000460120 UBE2DNLQ8IWF7 75 aa11.62□□□□□ -0.55
HPS3-202ENST00000460120 SNURFQ9Y675 71 aa11.61□□□□□ -0.55
HPS3-202ENST00000460120 DHRS4-AS1Q9P1J3 65 aa11.6□□□□□ -0.55
HPS3-202ENST00000460120 KRTAP4-16G5E9R7 235 aaPredicted RBP11.6□□□□□ -0.55
HPS3-202ENST00000460120 PRYO14603 147 aa11.6□□□□□ -0.55
HPS3-202ENST00000460120 A0A096LNI7 61 aa11.59□□□□□ -0.55
HPS3-202ENST00000460120 PLA2G2DQ9UNK4 145 aa11.58□□□□□ -0.56
HPS3-202ENST00000460120 PRLHP81277 87 aa11.58□□□□□ -0.56
HPS3-202ENST00000460120 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
HPS3-202ENST00000460120 CHTF8P0CG12 524 aa11.56□□□□□ -0.56
HPS3-202ENST00000460120 REG3GQ6UW15 175 aa11.56□□□□□ -0.56
HPS3-202ENST00000460120 DNAH9Q9NYC9 4486 aa11.55□□□□□ -0.56
HPS3-202ENST00000460120 TRAV7A0A075B6U4 112 aa11.55□□□□□ -0.56
HPS3-202ENST00000460120 IGLV5-37A0A075B6J1 123 aa11.55□□□□□ -0.56
HPS3-202ENST00000460120 A0A1W2PNM2 257 aa11.55□□□□□ -0.56
HPS3-202ENST00000460120 SPRR1AP35321 89 aa11.55□□□□□ -0.56
HPS3-202ENST00000460120 FUSP35637 526 aaKnown RBP eCLIP11.54□□□□□ -0.56
HPS3-202ENST00000460120 DNAH7Q8WXX0 4024 aa11.53□□□□□ -0.56
HPS3-202ENST00000460120 SRRM2Q9UQ35 2752 aaKnown RBP11.53□□□□□ -0.56
HPS3-202ENST00000460120 IGLV5-48A0A075B6I7 105 aa11.52□□□□□ -0.56
HPS3-202ENST00000460120 HIGD2AQ9BW72 106 aa11.52□□□□□ -0.56
HPS3-202ENST00000460120 IGKV4-1P06312 121 aa11.52□□□□□ -0.57
HPS3-202ENST00000460120 SEC61GP60059 68 aa11.52□□□□□ -0.57
HPS3-202ENST00000460120 FAM236DA0A1B0GTK5 79 aa11.5□□□□□ -0.57
HPS3-202ENST00000460120 FAM236CP0DP71 79 aa11.5□□□□□ -0.57
HPS3-202ENST00000460120 MDFIQ99750 246 aa11.48□□□□□ -0.57
HPS3-202ENST00000460120 PHF5AQ7RTV0 110 aaKnown RBP11.48□□□□□ -0.57
HPS3-202ENST00000460120 DEFB116Q30KQ4 102 aa11.47□□□□□ -0.57
HPS3-202ENST00000460120 APLNQ9ULZ1 77 aa11.46□□□□□ -0.57
HPS3-202ENST00000460120 A0A0U1RQV1 116 aa11.46□□□□□ -0.58
HPS3-202ENST00000460120 C16orf90A8MZG2 172 aa11.46□□□□□ -0.58
HPS3-202ENST00000460120 TNP2Q05952 138 aa11.46□□□□□ -0.58
HPS3-202ENST00000460120 KRTAP11-1Q8IUC1 163 aa11.46□□□□□ -0.58
HPS3-202ENST00000460120 Q8NBF4 154 aa11.45□□□□□ -0.58
HPS3-202ENST00000460120 LINC00476Q8WZB0 136 aa11.45□□□□□ -0.58
HPS3-202ENST00000460120 F8WEM9 126 aa11.44□□□□□ -0.58
HPS3-202ENST00000460120 H7BZZ5 65 aa11.44□□□□□ -0.58
HPS3-202ENST00000460120 SMIM29Q86T20 159 aa11.44□□□□□ -0.58
HPS3-202ENST00000460120 V9GYY9 64 aa11.42□□□□□ -0.58
HPS3-202ENST00000460120 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
HPS3-202ENST00000460120 FP248Q71RG6 208 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms