RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 H0YGX0 51 aa5.8□□□□□ -1.48
VPS50-207ENST00000458530 M0R378 163 aa5.8□□□□□ -1.48
VPS50-207ENST00000458530 NCR3O14931 201 aa5.8□□□□□ -1.48
VPS50-207ENST00000458530 SNCGO76070 127 aa5.8□□□□□ -1.48
VPS50-207ENST00000458530 CDK2AP2O75956 126 aa5.79□□□□□ -1.48
VPS50-207ENST00000458530 VPREB1P12018 145 aa5.79□□□□□ -1.48
VPS50-207ENST00000458530 GAGE2BQ13066 116 aa5.79□□□□□ -1.48
VPS50-207ENST00000458530 WFDC2Q14508 124 aa5.79□□□□□ -1.48
VPS50-207ENST00000458530 Q8N814 137 aa5.79□□□□□ -1.48
VPS50-207ENST00000458530 LINC00474Q9P2X8 69 aa5.79□□□□□ -1.48
VPS50-207ENST00000458530 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
VPS50-207ENST00000458530 LRP1BQ9NZR2 4599 aa5.78□□□□□ -1.48
VPS50-207ENST00000458530 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.78□□□□□ -1.48
VPS50-207ENST00000458530 C16orf90A8MZG2 172 aa5.78□□□□□ -1.48
VPS50-207ENST00000458530 TCL1BO95988 128 aa5.78□□□□□ -1.48
VPS50-207ENST00000458530 SLPIP03973 132 aa5.78□□□□□ -1.48
VPS50-207ENST00000458530 SMIM11BQ8TCY0 68 aa5.78□□□□□ -1.48
VPS50-207ENST00000458530 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
VPS50-207ENST00000458530 IGLV5-37A0A075B6J1 123 aa5.77□□□□□ -1.49
VPS50-207ENST00000458530 A0A087WTM6 91 aa5.77□□□□□ -1.49
VPS50-207ENST00000458530 F8W1H4 67 aa5.77□□□□□ -1.49
VPS50-207ENST00000458530 H3BMG7 143 aa5.77□□□□□ -1.49
VPS50-207ENST00000458530 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
VPS50-207ENST00000458530 C9orf129Q5T035 196 aaKnown RBP5.77□□□□□ -1.49
VPS50-207ENST00000458530 C9orf163Q8N9P6 203 aa5.77□□□□□ -1.49
VPS50-207ENST00000458530 TRAV23DV6A0A075B6W5 121 aa5.76□□□□□ -1.49
VPS50-207ENST00000458530 A0A1B0GX51 115 aa5.76□□□□□ -1.49
VPS50-207ENST00000458530 LST1O00453 97 aa5.76□□□□□ -1.49
VPS50-207ENST00000458530 DNAL4O96015 105 aa5.76□□□□□ -1.49
VPS50-207ENST00000458530 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
VPS50-207ENST00000458530 DIRC1Q969H9 104 aa5.76□□□□□ -1.49
VPS50-207ENST00000458530 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
VPS50-207ENST00000458530 TRBV10-3A0A0K0K1G6 114 aa5.75□□□□□ -1.49
VPS50-207ENST00000458530 TRACP01848 142 aa5.75□□□□□ -1.49
VPS50-207ENST00000458530 PRR3P79522 188 aaKnown RBP5.75□□□□□ -1.49
VPS50-207ENST00000458530 LINC01620Q4KN68 170 aa5.75□□□□□ -1.49
VPS50-207ENST00000458530 Q8N1X5 172 aa5.75□□□□□ -1.49
VPS50-207ENST00000458530 TRBV7-6A0A0J9YX20 115 aa5.74□□□□□ -1.49
VPS50-207ENST00000458530 M0QXV9 152 aa5.74□□□□□ -1.49
VPS50-207ENST00000458530 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
VPS50-207ENST00000458530 Q8NDZ9 215 aa5.74□□□□□ -1.49
VPS50-207ENST00000458530 CLEC2BQ92478 149 aa5.74□□□□□ -1.49
VPS50-207ENST00000458530 A0A096LNI7 61 aa5.73□□□□□ -1.49
VPS50-207ENST00000458530 C9JAW5 83 aa5.73□□□□□ -1.49
VPS50-207ENST00000458530 H3BT86 120 aa5.73□□□□□ -1.49
VPS50-207ENST00000458530 PRYO14603 147 aa5.73□□□□□ -1.49
VPS50-207ENST00000458530 SLC25A20O43772 301 aa5.73□□□□□ -1.49
VPS50-207ENST00000458530 C6orf99Q4VX62 202 aa5.73□□□□□ -1.49
VPS50-207ENST00000458530 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
VPS50-207ENST00000458530 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
VPS50-207ENST00000458530 IGKV2-24A0A0C4DH68 120 aa5.72□□□□□ -1.49
VPS50-207ENST00000458530 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
VPS50-207ENST00000458530 SERTAD4-AS1Q5TG53 156 aa5.72□□□□□ -1.49
VPS50-207ENST00000458530 MRPL55Q7Z7F7 128 aaKnown RBP5.72□□□□□ -1.49
VPS50-207ENST00000458530 C7orf33Q8WU49 177 aa5.72□□□□□ -1.49
VPS50-207ENST00000458530 IGLV5-52A0A0A0MRZ9 124 aa5.71□□□□□ -1.5
VPS50-207ENST00000458530 H3BQ85 93 aa5.71□□□□□ -1.5
VPS50-207ENST00000458530 COX7BP24311 80 aa5.71□□□□□ -1.5
VPS50-207ENST00000458530 KCNQ1DNQ9H478 68 aa5.71□□□□□ -1.5
VPS50-207ENST00000458530 C22orf24Q9Y442 160 aa5.71□□□□□ -1.5
VPS50-207ENST00000458530 SDIM1Q6ZPB5 146 aa5.7□□□□□ -1.5
VPS50-207ENST00000458530 ANKRD29Q8N6D5 301 aa5.7□□□□□ -1.5
VPS50-207ENST00000458530 PRO0461Q9UI25 63 aa5.7□□□□□ -1.5
VPS50-207ENST00000458530 IGLV1-50A0A075B6I6 118 aa5.69□□□□□ -1.5
VPS50-207ENST00000458530 FAM168BA1KXE4 195 aa5.69□□□□□ -1.5
VPS50-207ENST00000458530 ELOF1P60002 83 aaKnown RBP5.69□□□□□ -1.5
VPS50-207ENST00000458530 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
VPS50-207ENST00000458530 LINC01600Q96MT4 127 aa5.69□□□□□ -1.5
VPS50-207ENST00000458530 LINC00167Q96N53 147 aa5.69□□□□□ -1.5
VPS50-207ENST00000458530 A0A087WYN8 130 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 ETDCA0A1B0GVM5 59 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 hADV29S1A0JD25 119 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 J3QR89 54 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 OCIAD2Q56VL3 154 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 LINC00575Q6W349 94 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 TEN1Q86WV5 123 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 MTURNQ8N3F0 131 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 DPH3Q96FX2 82 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 FAM218AQ96MZ4 157 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 ORMDL1Q9P0S3 153 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
VPS50-207ENST00000458530 K7ERU9 68 aa5.67□□□□□ -1.5
VPS50-207ENST00000458530 INAFM2P0DMQ5 153 aa5.67□□□□□ -1.5
VPS50-207ENST00000458530 UBE2BP63146 152 aa5.67□□□□□ -1.5
VPS50-207ENST00000458530 REG3GQ6UW15 175 aa5.67□□□□□ -1.5
VPS50-207ENST00000458530 SPACA4Q8TDM5 124 aa5.67□□□□□ -1.5
VPS50-207ENST00000458530 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
VPS50-207ENST00000458530 RPL37AP8A6NKH3 93 aa5.66□□□□□ -1.5
VPS50-207ENST00000458530 BAALC-AS2P0C853 105 aa5.66□□□□□ -1.5
VPS50-207ENST00000458530 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
VPS50-207ENST00000458530 ETDBQ3ZM63 59 aa5.66□□□□□ -1.5
VPS50-207ENST00000458530 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.66□□□□□ -1.5
VPS50-207ENST00000458530 DHRS4-AS1Q9P1J3 65 aa5.66□□□□□ -1.5
VPS50-207ENST00000458530 UBR4Q5T4S7 5183 aa5.66□□□□□ -1.5
VPS50-207ENST00000458530 A0A1W2PNN7 141 aa5.65□□□□□ -1.5
VPS50-207ENST00000458530 TMEM256-PLSCR3K7ERE1 68 aa5.65□□□□□ -1.5
VPS50-207ENST00000458530 SPRR1AP35321 89 aa5.65□□□□□ -1.5
VPS50-207ENST00000458530 Q6ZRX8 168 aa5.65□□□□□ -1.5
VPS50-207ENST00000458530 PPDPFLQ8WWR9 84 aa5.65□□□□□ -1.5
VPS50-207ENST00000458530 FLG2Q5D862 2391 aaPredicted RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 655.5 ms