RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 SCXQ7RTU7 201 aa13.44□□□□□ -0.26
CRAT-207ENST00000458362 LINC00588Q9Y4M8 146 aa13.43□□□□□ -0.26
CRAT-207ENST00000458362 LOC107984640A0A0U1RRK4 108 aa13.43□□□□□ -0.26
CRAT-207ENST00000458362 SVIPQ8NHG7 77 aa13.43□□□□□ -0.26
CRAT-207ENST00000458362 TRAV10A0A0B4J240 114 aa13.42□□□□□ -0.26
CRAT-207ENST00000458362 PRB2P02812 416 aaPredicted RBP13.41□□□□□ -0.26
CRAT-207ENST00000458362 TMEM258P61165 79 aa13.41□□□□□ -0.26
CRAT-207ENST00000458362 FAM168BA1KXE4 195 aa13.4□□□□□ -0.26
CRAT-207ENST00000458362 TLX1NBP0CAT3 122 aa13.39□□□□□ -0.27
CRAT-207ENST00000458362 DEFB105AQ8NG35 78 aa13.38□□□□□ -0.27
CRAT-207ENST00000458362 RPL37AP8A6NKH3 93 aa13.37□□□□□ -0.27
CRAT-207ENST00000458362 J3KT08 172 aa13.37□□□□□ -0.27
CRAT-207ENST00000458362 C20orf197Q8N268 126 aa13.37□□□□□ -0.27
CRAT-207ENST00000458362 Q8N377 158 aa13.37□□□□□ -0.27
CRAT-207ENST00000458362 MRAPQ8TCY5 172 aa13.36□□□□□ -0.27
CRAT-207ENST00000458362 TRAV7A0A075B6U4 112 aa13.36□□□□□ -0.27
CRAT-207ENST00000458362 BCE1O60756 84 aa13.36□□□□□ -0.27
CRAT-207ENST00000458362 KRTAP7-1Q8IUC3 87 aa13.36□□□□□ -0.27
CRAT-207ENST00000458362 PLA2G2DQ9UNK4 145 aa13.36□□□□□ -0.27
CRAT-207ENST00000458362 DPH3Q96FX2 82 aa13.34□□□□□ -0.27
CRAT-207ENST00000458362 NBEAL1Q6ZS30 2694 aa13.34□□□□□ -0.27
CRAT-207ENST00000458362 KRTAP4-16G5E9R7 235 aaPredicted RBP13.33□□□□□ -0.28
CRAT-207ENST00000458362 DNAH1Q9P2D7 4330 aa13.32□□□□□ -0.28
CRAT-207ENST00000458362 Q9BRP9 147 aa13.32□□□□□ -0.28
CRAT-207ENST00000458362 IGLV1-50A0A075B6I6 118 aa13.32□□□□□ -0.28
CRAT-207ENST00000458362 IGLV5-37A0A075B6J1 123 aa13.32□□□□□ -0.28
CRAT-207ENST00000458362 RPS28P62857 69 aaKnown RBP13.32□□□□□ -0.28
CRAT-207ENST00000458362 COL6A5A8TX70 2615 aa13.31□□□□□ -0.28
CRAT-207ENST00000458362 Q6ZRX8 168 aa13.31□□□□□ -0.28
CRAT-207ENST00000458362 TM2D3Q9BRN9 247 aa13.29□□□□□ -0.28
CRAT-207ENST00000458362 PRYO14603 147 aa13.29□□□□□ -0.28
CRAT-207ENST00000458362 Q8N9L7 120 aa13.29□□□□□ -0.28
CRAT-207ENST00000458362 BAHCC1Q9P281 2608 aa13.29□□□□□ -0.28
CRAT-207ENST00000458362 SPRR1AP35321 89 aa13.28□□□□□ -0.28
CRAT-207ENST00000458362 DHRS4-AS1Q9P1J3 65 aa13.28□□□□□ -0.28
CRAT-207ENST00000458362 C3orf84H3BNL1 204 aa13.28□□□□□ -0.28
CRAT-207ENST00000458362 IGLV5-48A0A075B6I7 105 aa13.27□□□□□ -0.28
CRAT-207ENST00000458362 OXTP01178 125 aa13.27□□□□□ -0.28
CRAT-207ENST00000458362 ST20-AS1Q8NBB2 130 aa13.27□□□□□ -0.28
CRAT-207ENST00000458362 FAM19A5Q7Z5A7 132 aaPredicted RBP13.27□□□□□ -0.29
CRAT-207ENST00000458362 ETDCA0A1B0GVM5 59 aa13.26□□□□□ -0.29
CRAT-207ENST00000458362 NREPQ16612 68 aa13.25□□□□□ -0.29
CRAT-207ENST00000458362 K7EIL1 84 aa13.25□□□□□ -0.29
CRAT-207ENST00000458362 HUWE1Q7Z6Z7 4374 aaKnown RBP13.24□□□□□ -0.29
CRAT-207ENST00000458362 RMI2Q96E14 147 aa13.24□□□□□ -0.29
CRAT-207ENST00000458362 IGKV4-1P06312 121 aa13.24□□□□□ -0.29
CRAT-207ENST00000458362 ERC2-IT1O76042 136 aa13.23□□□□□ -0.29
CRAT-207ENST00000458362 MRPL55Q7Z7F7 128 aaKnown RBP13.22□□□□□ -0.29
CRAT-207ENST00000458362 H7BZZ5 65 aa13.22□□□□□ -0.29
CRAT-207ENST00000458362 BPY2O14599 106 aa13.22□□□□□ -0.29
CRAT-207ENST00000458362 SNURFQ9Y675 71 aa13.22□□□□□ -0.29
CRAT-207ENST00000458362 A0A1W2PNM2 257 aa13.2□□□□□ -0.3
CRAT-207ENST00000458362 TNP2Q05952 138 aa13.2□□□□□ -0.3
CRAT-207ENST00000458362 KLKP1Q107X0 134 aa13.2□□□□□ -0.3
CRAT-207ENST00000458362 C1orf137Q5JT78 98 aa13.16□□□□□ -0.3
CRAT-207ENST00000458362 FAM236DA0A1B0GTK5 79 aa13.15□□□□□ -0.3
CRAT-207ENST00000458362 FAM236CP0DP71 79 aa13.15□□□□□ -0.3
CRAT-207ENST00000458362 KRTAP1-5Q9BYS1 174 aa13.15□□□□□ -0.3
CRAT-207ENST00000458362 FUSP35637 526 aaKnown RBP eCLIP13.15□□□□□ -0.3
CRAT-207ENST00000458362 UBE2BP63146 152 aa13.15□□□□□ -0.3
CRAT-207ENST00000458362 REG3GQ6UW15 175 aa13.13□□□□□ -0.31
CRAT-207ENST00000458362 MGAM2Q2M2H8 2515 aa13.13□□□□□ -0.31
CRAT-207ENST00000458362 Q8NBF4 154 aa13.11□□□□□ -0.31
CRAT-207ENST00000458362 A0A096LNI7 61 aa13.1□□□□□ -0.31
CRAT-207ENST00000458362 F8WEM9 126 aa13.1□□□□□ -0.31
CRAT-207ENST00000458362 SMIM29Q86T20 159 aa13.09□□□□□ -0.31
CRAT-207ENST00000458362 STAB2Q8WWQ8 2551 aa13.08□□□□□ -0.32
CRAT-207ENST00000458362 OCR1Q9BZK8 76 aa13.08□□□□□ -0.32
CRAT-207ENST00000458362 A0A1B0GW54 56 aa13.08□□□□□ -0.32
CRAT-207ENST00000458362 IGKV2-24A0A0C4DH68 120 aa13.07□□□□□ -0.32
CRAT-207ENST00000458362 SPRR4Q96PI1 79 aa13.07□□□□□ -0.32
CRAT-207ENST00000458362 DNAH10Q8IVF4 4471 aa13.07□□□□□ -0.32
CRAT-207ENST00000458362 A0A1W2PNN7 141 aa13.06□□□□□ -0.32
CRAT-207ENST00000458362 TMEM254Q8TBM7 123 aa13.05□□□□□ -0.32
CRAT-207ENST00000458362 A0A0G2JQZ4 141 aa13.05□□□□□ -0.32
CRAT-207ENST00000458362 C16orf90A8MZG2 172 aa13.04□□□□□ -0.32
CRAT-207ENST00000458362 PRLHP81277 87 aa13.04□□□□□ -0.32
CRAT-207ENST00000458362 LINC00476Q8WZB0 136 aa13.03□□□□□ -0.32
CRAT-207ENST00000458362 CNBPP62633 177 aaKnown RBP13.02□□□□□ -0.32
CRAT-207ENST00000458362 EPM2AB3EWF7 344 aa13.02□□□□□ -0.33
CRAT-207ENST00000458362 Q5XG85 94 aa13.01□□□□□ -0.33
CRAT-207ENST00000458362 SERP1Q9Y6X1 66 aa13.01□□□□□ -0.33
CRAT-207ENST00000458362 LYSTQ99698 3801 aa13.01□□□□□ -0.33
CRAT-207ENST00000458362 COL7A1Q02388 2944 aa13.01□□□□□ -0.33
CRAT-207ENST00000458362 PSCAO43653 123 aa13□□□□□ -0.33
CRAT-207ENST00000458362 DSCR10P59022 87 aa13□□□□□ -0.33
CRAT-207ENST00000458362 NDUFC1O43677 76 aa12.99□□□□□ -0.33
CRAT-207ENST00000458362 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.99□□□□□ -0.33
CRAT-207ENST00000458362 DNAH9Q9NYC9 4486 aa12.99□□□□□ -0.33
CRAT-207ENST00000458362 A0A0U1RQV1 116 aa12.98□□□□□ -0.33
CRAT-207ENST00000458362 KRTAP11-1Q8IUC1 163 aa12.97□□□□□ -0.33
CRAT-207ENST00000458362 APLNQ9ULZ1 77 aa12.97□□□□□ -0.33
CRAT-207ENST00000458362 C4orf26Q17RF5 130 aa12.97□□□□□ -0.33
CRAT-207ENST00000458362 IGFL1Q6UW32 110 aa12.97□□□□□ -0.33
CRAT-207ENST00000458362 UBE2DNLQ8IWF7 75 aa12.97□□□□□ -0.33
CRAT-207ENST00000458362 CHTF8P0CG12 524 aa12.96□□□□□ -0.33
CRAT-207ENST00000458362 FAM30AQ9NZY2 134 aa12.96□□□□□ -0.34
CRAT-207ENST00000458362 K7EQZ3 153 aa12.95□□□□□ -0.34
CRAT-207ENST00000458362 HIGD2AQ9BW72 106 aa12.95□□□□□ -0.34
CRAT-207ENST00000458362 PHF5AQ7RTV0 110 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms