RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 RPS28P62857 69 aaKnown RBP12.87□□□□□ -0.35
CNEP1R1-203ENST00000458059 LINC00528Q8N1L1 170 aa12.87□□□□□ -0.35
CNEP1R1-203ENST00000458059 TRAV7A0A075B6U4 112 aa12.86□□□□□ -0.35
CNEP1R1-203ENST00000458059 BPY2O14599 106 aa12.86□□□□□ -0.35
CNEP1R1-203ENST00000458059 FAM236DA0A1B0GTK5 79 aa12.85□□□□□ -0.35
CNEP1R1-203ENST00000458059 FAM236CP0DP71 79 aa12.85□□□□□ -0.35
CNEP1R1-203ENST00000458059 HRCT1Q6UXD1 115 aa12.85□□□□□ -0.35
CNEP1R1-203ENST00000458059 PDE6GP18545 87 aa12.84□□□□□ -0.35
CNEP1R1-203ENST00000458059 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
CNEP1R1-203ENST00000458059 FAM168BA1KXE4 195 aa12.84□□□□□ -0.35
CNEP1R1-203ENST00000458059 H7BZZ5 65 aa12.84□□□□□ -0.35
CNEP1R1-203ENST00000458059 F8WEM9 126 aa12.83□□□□□ -0.36
CNEP1R1-203ENST00000458059 SYCNQ0VAF6 134 aa12.83□□□□□ -0.36
CNEP1R1-203ENST00000458059 CXCL6P80162 114 aa12.82□□□□□ -0.36
CNEP1R1-203ENST00000458059 DEFB131BA0A096LNP1 70 aa12.81□□□□□ -0.36
CNEP1R1-203ENST00000458059 PRB2P02812 416 aaPredicted RBP12.81□□□□□ -0.36
CNEP1R1-203ENST00000458059 CASC10Q5T4H9 136 aa12.81□□□□□ -0.36
CNEP1R1-203ENST00000458059 C7orf33Q8WU49 177 aa12.8□□□□□ -0.36
CNEP1R1-203ENST00000458059 NREPQ16612 68 aa12.79□□□□□ -0.36
CNEP1R1-203ENST00000458059 ST20-AS1Q8NBB2 130 aa12.76□□□□□ -0.37
CNEP1R1-203ENST00000458059 Q5XG85 94 aa12.76□□□□□ -0.37
CNEP1R1-203ENST00000458059 TRBV7-6A0A0J9YX20 115 aa12.75□□□□□ -0.37
CNEP1R1-203ENST00000458059 Q8N377 158 aa12.75□□□□□ -0.37
CNEP1R1-203ENST00000458059 C11orf45Q8TAV5 145 aa12.75□□□□□ -0.37
CNEP1R1-203ENST00000458059 C5orf47Q569G3 176 aa12.74□□□□□ -0.37
CNEP1R1-203ENST00000458059 A0A0G2JQZ4 141 aa12.73□□□□□ -0.37
CNEP1R1-203ENST00000458059 A0A1W2PNN7 141 aa12.73□□□□□ -0.37
CNEP1R1-203ENST00000458059 H3BQ85 93 aa12.73□□□□□ -0.37
CNEP1R1-203ENST00000458059 CSMD3Q7Z407 3707 aa12.72□□□□□ -0.37
CNEP1R1-203ENST00000458059 KLKP1Q107X0 134 aa12.71□□□□□ -0.37
CNEP1R1-203ENST00000458059 IGKV4-1P06312 121 aa12.71□□□□□ -0.38
CNEP1R1-203ENST00000458059 SRRM2Q9UQ35 2752 aaKnown RBP12.71□□□□□ -0.38
CNEP1R1-203ENST00000458059 LINC01556Q5JQF7 62 aa12.7□□□□□ -0.38
CNEP1R1-203ENST00000458059 MRAPQ8TCY5 172 aa12.69□□□□□ -0.38
CNEP1R1-203ENST00000458059 MGAM2Q2M2H8 2515 aa12.69□□□□□ -0.38
CNEP1R1-203ENST00000458059 Q9BRP9 147 aa12.69□□□□□ -0.38
CNEP1R1-203ENST00000458059 TMEM254Q8TBM7 123 aa12.67□□□□□ -0.38
CNEP1R1-203ENST00000458059 KCNQ1DNQ9H478 68 aa12.67□□□□□ -0.38
CNEP1R1-203ENST00000458059 ETDCA0A1B0GVM5 59 aa12.67□□□□□ -0.38
CNEP1R1-203ENST00000458059 H3BNG1 76 aa12.66□□□□□ -0.38
CNEP1R1-203ENST00000458059 ERC2-IT1O76042 136 aa12.66□□□□□ -0.38
CNEP1R1-203ENST00000458059 FAM30AQ9NZY2 134 aa12.66□□□□□ -0.38
CNEP1R1-203ENST00000458059 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
CNEP1R1-203ENST00000458059 UBE2BP63146 152 aa12.64□□□□□ -0.39
CNEP1R1-203ENST00000458059 LINC00474Q9P2X8 69 aa12.64□□□□□ -0.39
CNEP1R1-203ENST00000458059 STAB2Q8WWQ8 2551 aa12.63□□□□□ -0.39
CNEP1R1-203ENST00000458059 A0A1W2PNM2 257 aa12.63□□□□□ -0.39
CNEP1R1-203ENST00000458059 WIPF1O43516 503 aa12.63□□□□□ -0.39
CNEP1R1-203ENST00000458059 SERP1Q9Y6X1 66 aa12.63□□□□□ -0.39
CNEP1R1-203ENST00000458059 Q6ZRX8 168 aa12.63□□□□□ -0.39
CNEP1R1-203ENST00000458059 HIGD2AQ9BW72 106 aa12.63□□□□□ -0.39
CNEP1R1-203ENST00000458059 LINC00588Q9Y4M8 146 aa12.63□□□□□ -0.39
CNEP1R1-203ENST00000458059 C1orf137Q5JT78 98 aa12.62□□□□□ -0.39
CNEP1R1-203ENST00000458059 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
CNEP1R1-203ENST00000458059 BCE1O60756 84 aa12.62□□□□□ -0.39
CNEP1R1-203ENST00000458059 FUSP35637 526 aaKnown RBP eCLIP12.61□□□□□ -0.39
CNEP1R1-203ENST00000458059 DEFB116Q30KQ4 102 aa12.61□□□□□ -0.39
CNEP1R1-203ENST00000458059 SMIM29Q86T20 159 aa12.61□□□□□ -0.39
CNEP1R1-203ENST00000458059 IGKV2-24A0A0C4DH68 120 aa12.59□□□□□ -0.39
CNEP1R1-203ENST00000458059 IGLV1-50A0A075B6I6 118 aa12.58□□□□□ -0.4
CNEP1R1-203ENST00000458059 KRTAP24-1Q3LI83 254 aa12.58□□□□□ -0.4
CNEP1R1-203ENST00000458059 LYSTQ99698 3801 aa12.57□□□□□ -0.4
CNEP1R1-203ENST00000458059 DNAH10OSP0CZ25 163 aa12.57□□□□□ -0.4
CNEP1R1-203ENST00000458059 OCR1Q9BZK8 76 aa12.57□□□□□ -0.4
CNEP1R1-203ENST00000458059 FP248Q71RG6 208 aaPredicted RBP12.56□□□□□ -0.4
CNEP1R1-203ENST00000458059 IGLV5-48A0A075B6I7 105 aa12.55□□□□□ -0.4
CNEP1R1-203ENST00000458059 DHRS4-AS1Q9P1J3 65 aa12.55□□□□□ -0.4
CNEP1R1-203ENST00000458059 DNAH10Q8IVF4 4471 aa12.55□□□□□ -0.4
CNEP1R1-203ENST00000458059 MRPL55Q7Z7F7 128 aaKnown RBP12.54□□□□□ -0.4
CNEP1R1-203ENST00000458059 MPLKIPQ8TAP9 179 aa12.54□□□□□ -0.4
CNEP1R1-203ENST00000458059 PRLHP81277 87 aa12.54□□□□□ -0.4
CNEP1R1-203ENST00000458059 KRTAP4-16G5E9R7 235 aaPredicted RBP12.53□□□□□ -0.4
CNEP1R1-203ENST00000458059 FAM229BQ4G0N7 80 aa12.53□□□□□ -0.4
CNEP1R1-203ENST00000458059 PRYO14603 147 aa12.53□□□□□ -0.4
CNEP1R1-203ENST00000458059 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.41
CNEP1R1-203ENST00000458059 EPM2AB3EWF7 344 aa12.52□□□□□ -0.41
CNEP1R1-203ENST00000458059 K7EQZ3 153 aa12.51□□□□□ -0.41
CNEP1R1-203ENST00000458059 LRCOL1A6NCL2 159 aa12.51□□□□□ -0.41
CNEP1R1-203ENST00000458059 LINC00336Q6ZUF6 198 aa12.5□□□□□ -0.41
CNEP1R1-203ENST00000458059 Q8NBF4 154 aa12.49□□□□□ -0.41
CNEP1R1-203ENST00000458059 COL7A1Q02388 2944 aa12.48□□□□□ -0.41
CNEP1R1-203ENST00000458059 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.48□□□□□ -0.41
CNEP1R1-203ENST00000458059 A0A0U1RQV1 116 aa12.48□□□□□ -0.41
CNEP1R1-203ENST00000458059 PRR4Q16378 134 aa12.48□□□□□ -0.41
CNEP1R1-203ENST00000458059 NDUFC1O43677 76 aa12.48□□□□□ -0.41
CNEP1R1-203ENST00000458059 TLX1NBP0CAT3 122 aa12.46□□□□□ -0.41
CNEP1R1-203ENST00000458059 SMIM26A0A096LP01 95 aa12.46□□□□□ -0.42
CNEP1R1-203ENST00000458059 DSCR10P59022 87 aa12.46□□□□□ -0.42
CNEP1R1-203ENST00000458059 TNP2Q05952 138 aa12.46□□□□□ -0.42
CNEP1R1-203ENST00000458059 REG3GQ6UW15 175 aa12.45□□□□□ -0.42
CNEP1R1-203ENST00000458059 LINC00476Q8WZB0 136 aa12.45□□□□□ -0.42
CNEP1R1-203ENST00000458059 SPRR1AP35321 89 aa12.45□□□□□ -0.42
CNEP1R1-203ENST00000458059 WFDC13Q8IUB5 93 aa12.43□□□□□ -0.42
CNEP1R1-203ENST00000458059 A0A096LNI7 61 aa12.43□□□□□ -0.42
CNEP1R1-203ENST00000458059 F8WDY8 70 aa12.43□□□□□ -0.42
CNEP1R1-203ENST00000458059 CHTF8P0CG12 524 aa12.41□□□□□ -0.42
CNEP1R1-203ENST00000458059 RPL37AP61513 92 aaKnown RBP12.41□□□□□ -0.42
CNEP1R1-203ENST00000458059 PLA2G2DQ9UNK4 145 aa12.41□□□□□ -0.42
CNEP1R1-203ENST00000458059 KRTAP1-5Q9BYS1 174 aa12.4□□□□□ -0.42
CNEP1R1-203ENST00000458059 A0A087WSZ3 146 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms