RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 Q6ZVQ6 151 aa7.2□□□□□ -1.26
RFX3-211ENST00000458034 TEP1Q99973 2627 aaKnown RBP7.19□□□□□ -1.26
RFX3-211ENST00000458034 Q6ZRP5 223 aa7.19□□□□□ -1.26
RFX3-211ENST00000458034 SMIM20Q8N5G0 67 aa7.19□□□□□ -1.26
RFX3-211ENST00000458034 MRAPQ8TCY5 172 aa7.19□□□□□ -1.26
RFX3-211ENST00000458034 PRYO14603 147 aa7.18□□□□□ -1.26
RFX3-211ENST00000458034 LINC01547P58512 204 aaPredicted RBP7.18□□□□□ -1.26
RFX3-211ENST00000458034 FAM19A1Q7Z5A9 133 aa7.18□□□□□ -1.26
RFX3-211ENST00000458034 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
RFX3-211ENST00000458034 NBEAL2Q6ZNJ1 2754 aa7.17□□□□□ -1.26
RFX3-211ENST00000458034 IGLV5-37A0A075B6J1 123 aa7.17□□□□□ -1.26
RFX3-211ENST00000458034 TMEM258P61165 79 aa7.17□□□□□ -1.26
RFX3-211ENST00000458034 HAMPP81172 84 aa7.17□□□□□ -1.26
RFX3-211ENST00000458034 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
RFX3-211ENST00000458034 DHRS4-AS1Q9P1J3 65 aa7.17□□□□□ -1.26
RFX3-211ENST00000458034 C7orf33Q8WU49 177 aa7.16□□□□□ -1.26
RFX3-211ENST00000458034 HECTD1Q9ULT8 2610 aa7.16□□□□□ -1.26
RFX3-211ENST00000458034 LINC00588Q9Y4M8 146 aa7.15□□□□□ -1.26
RFX3-211ENST00000458034 OTOGQ6ZRI0 2925 aa7.14□□□□□ -1.27
RFX3-211ENST00000458034 TRAV7A0A075B6U4 112 aa7.14□□□□□ -1.27
RFX3-211ENST00000458034 M0R2N4 97 aa7.14□□□□□ -1.27
RFX3-211ENST00000458034 ATRQ13535 2644 aa7.14□□□□□ -1.27
RFX3-211ENST00000458034 TM2D3Q9BRN9 247 aa7.14□□□□□ -1.27
RFX3-211ENST00000458034 VWFP04275 2813 aa7.13□□□□□ -1.27
RFX3-211ENST00000458034 ETDCA0A1B0GVM5 59 aa7.13□□□□□ -1.27
RFX3-211ENST00000458034 A0A1B0GW54 56 aa7.13□□□□□ -1.27
RFX3-211ENST00000458034 J3KT08 172 aa7.13□□□□□ -1.27
RFX3-211ENST00000458034 SERTAD4-AS1Q5TG53 156 aa7.13□□□□□ -1.27
RFX3-211ENST00000458034 LOC107984640A0A0U1RRK4 108 aa7.12□□□□□ -1.27
RFX3-211ENST00000458034 HIVEP1P15822 2718 aa7.11□□□□□ -1.27
RFX3-211ENST00000458034 RPS28P62857 69 aaKnown RBP7.11□□□□□ -1.27
RFX3-211ENST00000458034 Q6ZRX8 168 aa7.1□□□□□ -1.27
RFX3-211ENST00000458034 TENM1Q9UKZ4 2725 aa7.09□□□□□ -1.27
RFX3-211ENST00000458034 IGLV1-50A0A075B6I6 118 aa7.09□□□□□ -1.27
RFX3-211ENST00000458034 SPRR1AP35321 89 aa7.09□□□□□ -1.27
RFX3-211ENST00000458034 NREPQ16612 68 aa7.09□□□□□ -1.27
RFX3-211ENST00000458034 KRTAP4-2Q9BYR5 136 aa7.09□□□□□ -1.27
RFX3-211ENST00000458034 IGLV5-48A0A075B6I7 105 aa7.08□□□□□ -1.28
RFX3-211ENST00000458034 FUSP35637 526 aaKnown RBP eCLIP7.08□□□□□ -1.28
RFX3-211ENST00000458034 Q8N377 158 aa7.08□□□□□ -1.28
RFX3-211ENST00000458034 DEFB105AQ8NG35 78 aa7.08□□□□□ -1.28
RFX3-211ENST00000458034 MRPL55Q7Z7F7 128 aaKnown RBP7.07□□□□□ -1.28
RFX3-211ENST00000458034 KRTAP4-16G5E9R7 235 aaPredicted RBP7.06□□□□□ -1.28
RFX3-211ENST00000458034 K7EIL1 84 aa7.06□□□□□ -1.28
RFX3-211ENST00000458034 C20orf197Q8N268 126 aa7.06□□□□□ -1.28
RFX3-211ENST00000458034 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
RFX3-211ENST00000458034 RPL37AP8A6NKH3 93 aa7.05□□□□□ -1.28
RFX3-211ENST00000458034 BPY2O14599 106 aa7.05□□□□□ -1.28
RFX3-211ENST00000458034 CASC10Q5T4H9 136 aa7.05□□□□□ -1.28
RFX3-211ENST00000458034 SCXQ7RTU7 201 aa7.05□□□□□ -1.28
RFX3-211ENST00000458034 FAM19A5Q7Z5A7 132 aaPredicted RBP7.05□□□□□ -1.28
RFX3-211ENST00000458034 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
RFX3-211ENST00000458034 F8P00451 2351 aa7.05□□□□□ -1.28
RFX3-211ENST00000458034 FAM168BA1KXE4 195 aa7.04□□□□□ -1.28
RFX3-211ENST00000458034 C14orf177Q52M58 125 aa7.04□□□□□ -1.28
RFX3-211ENST00000458034 REG3GQ6UW15 175 aa7.04□□□□□ -1.28
RFX3-211ENST00000458034 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
RFX3-211ENST00000458034 NDUFC1O43677 76 aa7.03□□□□□ -1.28
RFX3-211ENST00000458034 UBE2BP63146 152 aa7.03□□□□□ -1.28
RFX3-211ENST00000458034 DPH3Q96FX2 82 aa7.03□□□□□ -1.28
RFX3-211ENST00000458034 Q9BRP9 147 aa7.03□□□□□ -1.28
RFX3-211ENST00000458034 DNAH3Q8TD57 4116 aa7.03□□□□□ -1.28
RFX3-211ENST00000458034 FAM236DA0A1B0GTK5 79 aa7.02□□□□□ -1.29
RFX3-211ENST00000458034 F8WEM9 126 aa7.02□□□□□ -1.29
RFX3-211ENST00000458034 ERC2-IT1O76042 136 aa7.02□□□□□ -1.29
RFX3-211ENST00000458034 PRB2P02812 416 aaPredicted RBP7.02□□□□□ -1.29
RFX3-211ENST00000458034 FAM236CP0DP71 79 aa7.02□□□□□ -1.29
RFX3-211ENST00000458034 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
RFX3-211ENST00000458034 C1orf137Q5JT78 98 aa7.02□□□□□ -1.29
RFX3-211ENST00000458034 UBE2DNLQ8IWF7 75 aa7.02□□□□□ -1.29
RFX3-211ENST00000458034 Q8NBF4 154 aa7.02□□□□□ -1.29
RFX3-211ENST00000458034 CMYA5Q8N3K9 4069 aa7.01□□□□□ -1.29
RFX3-211ENST00000458034 C3orf84H3BNL1 204 aa7.01□□□□□ -1.29
RFX3-211ENST00000458034 PSCAO43653 123 aa7.01□□□□□ -1.29
RFX3-211ENST00000458034 IGKV4-1P06312 121 aa7.01□□□□□ -1.29
RFX3-211ENST00000458034 C16orf90A8MZG2 172 aa7□□□□□ -1.29
RFX3-211ENST00000458034 CNBPP62633 177 aaKnown RBP7□□□□□ -1.29
RFX3-211ENST00000458034 TRRAPQ9Y4A5 3859 aa7□□□□□ -1.29
RFX3-211ENST00000458034 ATP5EP56381 51 aaPredicted RBP6.99□□□□□ -1.29
RFX3-211ENST00000458034 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
RFX3-211ENST00000458034 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
RFX3-211ENST00000458034 ST20-AS1Q8NBB2 130 aa6.98□□□□□ -1.29
RFX3-211ENST00000458034 SPRR4Q96PI1 79 aa6.98□□□□□ -1.29
RFX3-211ENST00000458034 H7BZZ5 65 aa6.96□□□□□ -1.3
RFX3-211ENST00000458034 A0A096LNI7 61 aa6.95□□□□□ -1.3
RFX3-211ENST00000458034 APLNQ9ULZ1 77 aa6.95□□□□□ -1.3
RFX3-211ENST00000458034 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
RFX3-211ENST00000458034 Q8N9L7 120 aa6.94□□□□□ -1.3
RFX3-211ENST00000458034 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
RFX3-211ENST00000458034 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
RFX3-211ENST00000458034 IGKV2-24A0A0C4DH68 120 aa6.93□□□□□ -1.3
RFX3-211ENST00000458034 TMEM254Q8TBM7 123 aa6.93□□□□□ -1.3
RFX3-211ENST00000458034 LINC00476Q8WZB0 136 aa6.93□□□□□ -1.3
RFX3-211ENST00000458034 IGLV8-61A0A075B6I0 122 aa6.92□□□□□ -1.3
RFX3-211ENST00000458034 SMIM29Q86T20 159 aa6.92□□□□□ -1.3
RFX3-211ENST00000458034 OCR1Q9BZK8 76 aa6.92□□□□□ -1.3
RFX3-211ENST00000458034 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
RFX3-211ENST00000458034 A0A1W2PNN7 141 aa6.91□□□□□ -1.3
RFX3-211ENST00000458034 H0Y9J4 135 aa6.91□□□□□ -1.3
RFX3-211ENST00000458034 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms