RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 HERV-K104P63124 156 aa7.83□□□□□ -1.16
UPF3AP2-201ENST00000457924 URB1-AS1Q96HZ7 61 aa7.83□□□□□ -1.16
UPF3AP2-201ENST00000457924 SEC11CQ9BY50 192 aa7.83□□□□□ -1.16
UPF3AP2-201ENST00000457924 Q9BRP9 147 aa7.82□□□□□ -1.16
UPF3AP2-201ENST00000457924 MAP1LC3CQ9BXW4 147 aa7.82□□□□□ -1.16
UPF3AP2-201ENST00000457924 DDTP30046 118 aa7.81□□□□□ -1.16
UPF3AP2-201ENST00000457924 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
UPF3AP2-201ENST00000457924 Q6ZRX8 168 aa7.81□□□□□ -1.16
UPF3AP2-201ENST00000457924 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
UPF3AP2-201ENST00000457924 TMEM218A2RU14 115 aa7.79□□□□□ -1.16
UPF3AP2-201ENST00000457924 TRAV12-1A0A0B4J245 112 aa7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 TRBV10-2A0A0K0K1G8 114 aa7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 C9orf92A6NGG3 77 aa7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 M0R2T5 61 aa7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 JOSD1Q15040 202 aaPredicted RBP7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 UQCC3Q6UW78 93 aa7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 TRAPPC1Q9Y5R8 145 aa7.78□□□□□ -1.16
UPF3AP2-201ENST00000457924 LOC107984156A0A0G2JMH3 177 aa7.76□□□□□ -1.17
UPF3AP2-201ENST00000457924 CLLU1Q5K131 121 aa7.76□□□□□ -1.17
UPF3AP2-201ENST00000457924 ARL17AQ8IVW1 177 aa7.76□□□□□ -1.17
UPF3AP2-201ENST00000457924 S100A7L2Q5SY68 101 aa7.75□□□□□ -1.17
UPF3AP2-201ENST00000457924 SPANXB1Q9NS25 103 aaPredicted RBP7.75□□□□□ -1.17
UPF3AP2-201ENST00000457924 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
UPF3AP2-201ENST00000457924 IFI27L1Q96BM0 104 aa7.74□□□□□ -1.17
UPF3AP2-201ENST00000457924 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
UPF3AP2-201ENST00000457924 IGLV6-57P01721 117 aa7.73□□□□□ -1.17
UPF3AP2-201ENST00000457924 ST20-AS1Q8NBB2 130 aa7.73□□□□□ -1.17
UPF3AP2-201ENST00000457924 MIEN1Q9BRT3 115 aa7.73□□□□□ -1.17
UPF3AP2-201ENST00000457924 C5orf52A6NGY3 159 aa7.72□□□□□ -1.17
UPF3AP2-201ENST00000457924 RPS10P5Q9NQ39 176 aa7.72□□□□□ -1.17
UPF3AP2-201ENST00000457924 ZNF73O43830 326 aaPredicted RBP7.71□□□□□ -1.18
UPF3AP2-201ENST00000457924 SLC25A34Q6PIV7 304 aa7.71□□□□□ -1.18
UPF3AP2-201ENST00000457924 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.18
UPF3AP2-201ENST00000457924 NDUFC2O95298 119 aa7.7□□□□□ -1.18
UPF3AP2-201ENST00000457924 RHEBQ15382 184 aa7.7□□□□□ -1.18
UPF3AP2-201ENST00000457924 COMMD7Q86VX2 200 aa7.7□□□□□ -1.18
UPF3AP2-201ENST00000457924 HINT1P49773 126 aaPredicted RBP7.69□□□□□ -1.18
UPF3AP2-201ENST00000457924 IFITM2Q01629 132 aa7.69□□□□□ -1.18
UPF3AP2-201ENST00000457924 CHCHD1Q96BP2 118 aaKnown RBP7.69□□□□□ -1.18
UPF3AP2-201ENST00000457924 LEPROTO15243 131 aa7.68□□□□□ -1.18
UPF3AP2-201ENST00000457924 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
UPF3AP2-201ENST00000457924 SPRR1BP22528 89 aa7.67□□□□□ -1.18
UPF3AP2-201ENST00000457924 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
UPF3AP2-201ENST00000457924 H0Y8G0 127 aa7.66□□□□□ -1.18
UPF3AP2-201ENST00000457924 CBY1Q9Y3M2 126 aa7.66□□□□□ -1.18
UPF3AP2-201ENST00000457924 J3QQQ9 107 aa7.64□□□□□ -1.19
UPF3AP2-201ENST00000457924 NMUP48645 174 aa7.64□□□□□ -1.19
UPF3AP2-201ENST00000457924 CD164Q04900 197 aa7.64□□□□□ -1.19
UPF3AP2-201ENST00000457924 C10orf91Q5T1B1 145 aa7.64□□□□□ -1.19
UPF3AP2-201ENST00000457924 NPC2P61916 151 aa7.63□□□□□ -1.19
UPF3AP2-201ENST00000457924 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
UPF3AP2-201ENST00000457924 DHRS4-AS1Q9P1J3 65 aa7.63□□□□□ -1.19
UPF3AP2-201ENST00000457924 FLGP20930 4061 aaPredicted RBP7.63□□□□□ -1.19
UPF3AP2-201ENST00000457924 LGALS3P17931 250 aaKnown RBP7.62□□□□□ -1.19
UPF3AP2-201ENST00000457924 HSBP1O75506 76 aa7.61□□□□□ -1.19
UPF3AP2-201ENST00000457924 PLNP26678 52 aa7.61□□□□□ -1.19
UPF3AP2-201ENST00000457924 HERVK_113P61574 105 aa7.61□□□□□ -1.19
UPF3AP2-201ENST00000457924 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
UPF3AP2-201ENST00000457924 PRO1933Q9H354 126 aa7.61□□□□□ -1.19
UPF3AP2-201ENST00000457924 H7C2G1 150 aa7.6□□□□□ -1.19
UPF3AP2-201ENST00000457924 Q1RN00 199 aa7.59□□□□□ -1.19
UPF3AP2-201ENST00000457924 Q5XG85 94 aa7.59□□□□□ -1.19
UPF3AP2-201ENST00000457924 OR13C6PQ8NH95 151 aa7.59□□□□□ -1.19
UPF3AP2-201ENST00000457924 TAL2Q16559 108 aa7.58□□□□□ -1.2
UPF3AP2-201ENST00000457924 ADAMTSL4-AS1Q5T5F5 129 aa7.58□□□□□ -1.2
UPF3AP2-201ENST00000457924 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
UPF3AP2-201ENST00000457924 LEPROTL1O95214 131 aa7.57□□□□□ -1.2
UPF3AP2-201ENST00000457924 DEFB105AQ8NG35 78 aa7.57□□□□□ -1.2
UPF3AP2-201ENST00000457924 A0A0J9YXY3 114 aa7.56□□□□□ -1.2
UPF3AP2-201ENST00000457924 DPM2O94777 84 aa7.56□□□□□ -1.2
UPF3AP2-201ENST00000457924 AKR1D1P51857 326 aa7.56□□□□□ -1.2
UPF3AP2-201ENST00000457924 TEX49A0A1B0GTD5 131 aa7.55□□□□□ -1.2
UPF3AP2-201ENST00000457924 COX7BP24311 80 aa7.55□□□□□ -1.2
UPF3AP2-201ENST00000457924 SPANXCQ9NY87 97 aa7.55□□□□□ -1.2
UPF3AP2-201ENST00000457924 IGKCP01834 107 aa7.54□□□□□ -1.2
UPF3AP2-201ENST00000457924 ELOF1P60002 83 aaKnown RBP7.54□□□□□ -1.2
UPF3AP2-201ENST00000457924 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
UPF3AP2-201ENST00000457924 Q6Q795 121 aa7.53□□□□□ -1.2
UPF3AP2-201ENST00000457924 SMIM29Q86T20 159 aa7.53□□□□□ -1.2
UPF3AP2-201ENST00000457924 SPANXDQ9BXN6 97 aa7.53□□□□□ -1.2
UPF3AP2-201ENST00000457924 SNAPINO95295 136 aa7.52□□□□□ -1.21
UPF3AP2-201ENST00000457924 APOC3P02656 99 aa7.52□□□□□ -1.21
UPF3AP2-201ENST00000457924 C6orf99Q4VX62 202 aa7.52□□□□□ -1.21
UPF3AP2-201ENST00000457924 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
UPF3AP2-201ENST00000457924 HSPB8Q9UJY1 196 aa7.51□□□□□ -1.21
UPF3AP2-201ENST00000457924 SVBPQ8N300 66 aa7.5□□□□□ -1.21
UPF3AP2-201ENST00000457924 A0A0G2JQZ4 141 aa7.49□□□□□ -1.21
UPF3AP2-201ENST00000457924 E9PLD3 99 aa7.49□□□□□ -1.21
UPF3AP2-201ENST00000457924 TCL1BO95988 128 aa7.49□□□□□ -1.21
UPF3AP2-201ENST00000457924 CFC1P0CG37 223 aa7.49□□□□□ -1.21
UPF3AP2-201ENST00000457924 FABP4P15090 132 aa7.49□□□□□ -1.21
UPF3AP2-201ENST00000457924 NDUFA5Q16718 116 aa7.49□□□□□ -1.21
UPF3AP2-201ENST00000457924 YPEL4Q96NS1 127 aa7.49□□□□□ -1.21
UPF3AP2-201ENST00000457924 SERF1AO75920 110 aa7.48□□□□□ -1.21
UPF3AP2-201ENST00000457924 LINC00518Q8N0U6 118 aa7.48□□□□□ -1.21
UPF3AP2-201ENST00000457924 LITAFQ99732 161 aa7.48□□□□□ -1.21
UPF3AP2-201ENST00000457924 TIMM17BO60830 172 aa7.46□□□□□ -1.22
UPF3AP2-201ENST00000457924 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms