RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 Q6JHZ5 121 aa13.28□□□□□ -0.28
TMED4-203ENST00000457408 LINC00846Q9NV44 126 aa13.28□□□□□ -0.28
TMED4-203ENST00000457408 hADV29S1A0JD25 119 aa13.27□□□□□ -0.28
TMED4-203ENST00000457408 M0R2N4 97 aa13.27□□□□□ -0.28
TMED4-203ENST00000457408 TLX1NBP0CAT3 122 aa13.27□□□□□ -0.29
TMED4-203ENST00000457408 J3KT08 172 aa13.26□□□□□ -0.29
TMED4-203ENST00000457408 NBDYA0A0U1RRE5 68 aa13.25□□□□□ -0.29
TMED4-203ENST00000457408 CRYGAP11844 174 aa13.25□□□□□ -0.29
TMED4-203ENST00000457408 C5orf47Q569G3 176 aa13.25□□□□□ -0.29
TMED4-203ENST00000457408 RPL37AP8A6NKH3 93 aa13.24□□□□□ -0.29
TMED4-203ENST00000457408 COX7BP24311 80 aa13.24□□□□□ -0.29
TMED4-203ENST00000457408 C7orf33Q8WU49 177 aa13.24□□□□□ -0.29
TMED4-203ENST00000457408 TGP01266 2768 aa13.24□□□□□ -0.29
TMED4-203ENST00000457408 FAM19A5Q7Z5A7 132 aaPredicted RBP13.23□□□□□ -0.29
TMED4-203ENST00000457408 ATOX1O00244 68 aa13.23□□□□□ -0.29
TMED4-203ENST00000457408 CCKP06307 115 aa13.23□□□□□ -0.29
TMED4-203ENST00000457408 FBN3Q75N90 2809 aa13.22□□□□□ -0.29
TMED4-203ENST00000457408 IGKV3D-7A0A0C4DH55 119 aa13.22□□□□□ -0.29
TMED4-203ENST00000457408 JMJD7-PLA2G4BH0Y9G9 81 aa13.22□□□□□ -0.29
TMED4-203ENST00000457408 IGKV2-24A0A0C4DH68 120 aa13.21□□□□□ -0.29
TMED4-203ENST00000457408 RPS28P62857 69 aaKnown RBP13.21□□□□□ -0.29
TMED4-203ENST00000457408 Q6ZQY7 126 aa13.21□□□□□ -0.29
TMED4-203ENST00000457408 TMEM256-PLSCR3K7ERE1 68 aa13.21□□□□□ -0.3
TMED4-203ENST00000457408 ELOF1P60002 83 aaKnown RBP13.19□□□□□ -0.3
TMED4-203ENST00000457408 KRTAP7-1Q8IUC3 87 aa13.18□□□□□ -0.3
TMED4-203ENST00000457408 A0A096LNI7 61 aa13.16□□□□□ -0.3
TMED4-203ENST00000457408 PLA2G2DQ9UNK4 145 aa13.14□□□□□ -0.31
TMED4-203ENST00000457408 CNBPP62633 177 aaKnown RBP13.14□□□□□ -0.31
TMED4-203ENST00000457408 CYSTM1Q9H1C7 97 aa13.14□□□□□ -0.31
TMED4-203ENST00000457408 KCNQ1DNQ9H478 68 aa13.14□□□□□ -0.31
TMED4-203ENST00000457408 LAMTOR3Q9UHA4 124 aa13.14□□□□□ -0.31
TMED4-203ENST00000457408 C14orf177Q52M58 125 aa13.13□□□□□ -0.31
TMED4-203ENST00000457408 TRBV7-6A0A0J9YX20 115 aa13.12□□□□□ -0.31
TMED4-203ENST00000457408 MRPL55Q7Z7F7 128 aaKnown RBP13.12□□□□□ -0.31
TMED4-203ENST00000457408 LINC00528Q8N1L1 170 aa13.12□□□□□ -0.31
TMED4-203ENST00000457408 A0A087WVE0 104 aa13.11□□□□□ -0.31
TMED4-203ENST00000457408 LRCOL1A6NCL2 159 aa13.11□□□□□ -0.31
TMED4-203ENST00000457408 IGLV1-50A0A075B6I6 118 aa13.11□□□□□ -0.31
TMED4-203ENST00000457408 ATP5EP2Q5VTU8 51 aa13.1□□□□□ -0.31
TMED4-203ENST00000457408 CHTF8P0CG12 524 aa13.1□□□□□ -0.31
TMED4-203ENST00000457408 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
TMED4-203ENST00000457408 KMT2AQ03164 3969 aa13.09□□□□□ -0.31
TMED4-203ENST00000457408 IGLV5-37A0A075B6J1 123 aa13.09□□□□□ -0.31
TMED4-203ENST00000457408 VPS13DQ5THJ4 4388 aa13.09□□□□□ -0.31
TMED4-203ENST00000457408 C16orf90A8MZG2 172 aa13.08□□□□□ -0.31
TMED4-203ENST00000457408 DPH3Q96FX2 82 aa13.08□□□□□ -0.31
TMED4-203ENST00000457408 TMEM258P61165 79 aa13.08□□□□□ -0.32
TMED4-203ENST00000457408 SERP2Q8N6R1 65 aa13.08□□□□□ -0.32
TMED4-203ENST00000457408 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
TMED4-203ENST00000457408 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.07□□□□□ -0.32
TMED4-203ENST00000457408 ETDCA0A1B0GVM5 59 aa13.06□□□□□ -0.32
TMED4-203ENST00000457408 FUSP35637 526 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMED4-203ENST00000457408 DEFB105AQ8NG35 78 aa13.05□□□□□ -0.32
TMED4-203ENST00000457408 RBM3P98179 157 aaKnown RBP13.04□□□□□ -0.32
TMED4-203ENST00000457408 PRYO14603 147 aa13.03□□□□□ -0.32
TMED4-203ENST00000457408 UBL5Q9BZL1 73 aa13.03□□□□□ -0.32
TMED4-203ENST00000457408 LY6G6CO95867 125 aa13.02□□□□□ -0.32
TMED4-203ENST00000457408 Q6ZQT0 140 aa13.02□□□□□ -0.32
TMED4-203ENST00000457408 LOC110117498A0A087WWA1 95 aa13.02□□□□□ -0.33
TMED4-203ENST00000457408 KRTAP21-3Q3LHN1 58 aa13.02□□□□□ -0.33
TMED4-203ENST00000457408 C9orf163Q8N9P6 203 aa13.02□□□□□ -0.33
TMED4-203ENST00000457408 Q6ZRX8 168 aa13.01□□□□□ -0.33
TMED4-203ENST00000457408 OXTP01178 125 aa13□□□□□ -0.33
TMED4-203ENST00000457408 KRTAP4-16G5E9R7 235 aaPredicted RBP13□□□□□ -0.33
TMED4-203ENST00000457408 H3BQ85 93 aa13□□□□□ -0.33
TMED4-203ENST00000457408 Q9BRP9 147 aa13□□□□□ -0.33
TMED4-203ENST00000457408 REG3GQ6UW15 175 aa12.99□□□□□ -0.33
TMED4-203ENST00000457408 DSCR8Q96T75 97 aa12.99□□□□□ -0.33
TMED4-203ENST00000457408 SPRR1AP35321 89 aa12.97□□□□□ -0.33
TMED4-203ENST00000457408 UBE2BP63146 152 aa12.97□□□□□ -0.33
TMED4-203ENST00000457408 PHF5AQ7RTV0 110 aaKnown RBP12.97□□□□□ -0.33
TMED4-203ENST00000457408 FAM19A1Q7Z5A9 133 aa12.97□□□□□ -0.33
TMED4-203ENST00000457408 A0A087WTM6 91 aa12.96□□□□□ -0.33
TMED4-203ENST00000457408 GHRHP01286 108 aa12.96□□□□□ -0.33
TMED4-203ENST00000457408 Q6ZR54 194 aa12.96□□□□□ -0.34
TMED4-203ENST00000457408 DHRS4-AS1Q9P1J3 65 aa12.96□□□□□ -0.34
TMED4-203ENST00000457408 PANO1I0J062 215 aa12.95□□□□□ -0.34
TMED4-203ENST00000457408 DNAH2Q9P225 4427 aa12.95□□□□□ -0.34
TMED4-203ENST00000457408 ST20-AS1Q8NBB2 130 aa12.95□□□□□ -0.34
TMED4-203ENST00000457408 ERC2-IT1O76042 136 aa12.93□□□□□ -0.34
TMED4-203ENST00000457408 PDE6GP18545 87 aa12.93□□□□□ -0.34
TMED4-203ENST00000457408 C4orf26Q17RF5 130 aa12.93□□□□□ -0.34
TMED4-203ENST00000457408 Q5XG85 94 aa12.92□□□□□ -0.34
TMED4-203ENST00000457408 PRLHP81277 87 aa12.91□□□□□ -0.34
TMED4-203ENST00000457408 KRTAP11-1Q8IUC1 163 aa12.91□□□□□ -0.34
TMED4-203ENST00000457408 Q8N377 158 aa12.91□□□□□ -0.34
TMED4-203ENST00000457408 C1orf134Q5TEV5 83 aa12.9□□□□□ -0.34
TMED4-203ENST00000457408 HECTD4Q9Y4D8 3996 aa12.9□□□□□ -0.34
TMED4-203ENST00000457408 WWC2-AS2Q96NR7 200 aa12.9□□□□□ -0.34
TMED4-203ENST00000457408 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
TMED4-203ENST00000457408 Q6ZVQ6 151 aa12.88□□□□□ -0.35
TMED4-203ENST00000457408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.87□□□□□ -0.35
TMED4-203ENST00000457408 SRRM2Q9UQ35 2752 aaKnown RBP12.87□□□□□ -0.35
TMED4-203ENST00000457408 RTL8CO15255 209 aa12.87□□□□□ -0.35
TMED4-203ENST00000457408 HRCT1Q6UXD1 115 aa12.87□□□□□ -0.35
TMED4-203ENST00000457408 LINC00474Q9P2X8 69 aa12.87□□□□□ -0.35
TMED4-203ENST00000457408 HIGD2AQ9BW72 106 aa12.86□□□□□ -0.35
TMED4-203ENST00000457408 BCE1O60756 84 aa12.85□□□□□ -0.35
TMED4-203ENST00000457408 PKIGQ9Y2B9 76 aa12.85□□□□□ -0.35
TMED4-203ENST00000457408 TRBV7-4A0A0J9YYF1 115 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms