RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 TRAV12-1A0A0B4J245 112 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 A0A1W2PNM2 257 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 LINC01546A6NGU7 62 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 IGLV1-47P01700 117 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 P0C880 135 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 Q8NAQ8 132 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 DMAC1Q96GE9 116 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 LINC00167Q96N53 147 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 AMELXQ99217 191 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 LINC00846Q9NV44 126 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 LHFPL6Q9Y693 200 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 MINOS1-NBL1R4GNA1 71 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 ABCA1O95477 2261 aa3.43□□□□□ -1.86
VPS41-209ENST00000457055 MED12Q93074 2177 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 A0A096LNJ9 63 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 PANO1I0J062 215 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 IGLV7-43P04211 117 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 P0C879 139 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 C14orf177Q52M58 125 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 C1orf137Q5JT78 98 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 KPRPQ5T749 579 aaPredicted RBP3.42□□□□□ -1.86
VPS41-209ENST00000457055 ENHOQ6UWT2 76 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 Q6ZR54 194 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 ZNF833PQ6ZTB9 187 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 MALRD1Q5VYJ5 2156 aa3.42□□□□□ -1.86
VPS41-209ENST00000457055 LRCOL1A6NCL2 159 aa3.41□□□□□ -1.86
VPS41-209ENST00000457055 PIN1P1O15428 100 aa3.41□□□□□ -1.86
VPS41-209ENST00000457055 IGLV1-44P01699 117 aa3.41□□□□□ -1.86
VPS41-209ENST00000457055 ERHP84090 104 aaKnown RBP3.41□□□□□ -1.86
VPS41-209ENST00000457055 Q8N377 158 aa3.41□□□□□ -1.86
VPS41-209ENST00000457055 SPANXA2-OT1Q8N9U9 137 aa3.41□□□□□ -1.86
VPS41-209ENST00000457055 OBSCN-AS1Q96MR7 158 aa3.41□□□□□ -1.86
VPS41-209ENST00000457055 MRPL36Q9P0J6 103 aaKnown RBP3.41□□□□□ -1.86
VPS41-209ENST00000457055 DNAJC13O75165 2243 aa3.41□□□□□ -1.86
VPS41-209ENST00000457055 FREM3P0C091 2139 aa3.41□□□□□ -1.86
VPS41-209ENST00000457055 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.86
VPS41-209ENST00000457055 PRKDCP78527 4128 aaKnown RBP3.4□□□□□ -1.86
VPS41-209ENST00000457055 TRAV40A0A0B4J280 105 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 A0A1B0GVY2 172 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 CLPSL1A2RUU4 121 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 F8VRH5 84 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 M0R3E3 92 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 KRTAP10-3P60369 221 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 FXYD3Q14802 87 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 LINC01558Q9Y6Z2 57 aa3.4□□□□□ -1.87
VPS41-209ENST00000457055 TENM1Q9UKZ4 2725 aa3.39□□□□□ -1.87
VPS41-209ENST00000457055 BIRC6Q9NR09 4857 aa3.39□□□□□ -1.87
VPS41-209ENST00000457055 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
VPS41-209ENST00000457055 TMEM167BQ9NRX6 74 aa3.39□□□□□ -1.87
VPS41-209ENST00000457055 TMEM14CQ9P0S9 112 aa3.39□□□□□ -1.87
VPS41-209ENST00000457055 WNK1Q9H4A3 2382 aa3.39□□□□□ -1.87
VPS41-209ENST00000457055 CADP27708 2225 aa3.39□□□□□ -1.87
VPS41-209ENST00000457055 IGLV2-18A0A075B6J9 118 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 TRBV6-6A0A0A6YYG2 114 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 NUPR2A6NF83 97 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 KRTAP26-1Q6PEX3 210 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 LYPD1Q8N2G4 141 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 COX7B2Q8TF08 81 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 LINC00208Q96KT6 92 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 R4GMQ9 66 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 TRRAPQ9Y4A5 3859 aa3.38□□□□□ -1.87
VPS41-209ENST00000457055 FREM1Q5H8C1 2179 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 TRAV21A0A0B4J279 112 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 A0A0J9YX75 114 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 I3L3M4 83 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 M0R1W7 72 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 IGKV1-17P01599 117 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 MAPK1IP1LQ8NDC0 245 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 RNF5Q99942 180 aa3.37□□□□□ -1.87
VPS41-209ENST00000457055 CMYA5Q8N3K9 4069 aa3.36□□□□□ -1.87
VPS41-209ENST00000457055 IGKV3D-15A0A087WSY6 115 aa3.36□□□□□ -1.87
VPS41-209ENST00000457055 JMJD7-PLA2G4BH0Y9G9 81 aa3.36□□□□□ -1.87
VPS41-209ENST00000457055 TFF3Q07654 80 aa3.36□□□□□ -1.87
VPS41-209ENST00000457055 WFDC9Q8NEX5 89 aa3.36□□□□□ -1.87
VPS41-209ENST00000457055 ARHGAP32A7KAX9 2087 aa3.35□□□□□ -1.87
VPS41-209ENST00000457055 ALPK2Q86TB3 2170 aa3.35□□□□□ -1.87
VPS41-209ENST00000457055 A0A1B0GU33 70 aa3.35□□□□□ -1.87
VPS41-209ENST00000457055 IGIPA6NJ69 53 aa3.35□□□□□ -1.87
VPS41-209ENST00000457055 M0R135 149 aa3.35□□□□□ -1.87
VPS41-209ENST00000457055 CNBPP62633 177 aaKnown RBP3.35□□□□□ -1.87
VPS41-209ENST00000457055 TTTY12Q9BZ98 90 aa3.35□□□□□ -1.87
VPS41-209ENST00000457055 PRR34Q9NV39 138 aa3.35□□□□□ -1.87
VPS41-209ENST00000457055 LCE6AA0A183 80 aa3.34□□□□□ -1.87
VPS41-209ENST00000457055 NDUFA3O95167 84 aa3.34□□□□□ -1.87
VPS41-209ENST00000457055 GIG44P09565 113 aaPredicted RBP3.34□□□□□ -1.87
VPS41-209ENST00000457055 ARL14EPLP0DKL9 152 aa3.34□□□□□ -1.87
VPS41-209ENST00000457055 KRTAP7-1Q8IUC3 87 aa3.34□□□□□ -1.87
VPS41-209ENST00000457055 PLAC8Q9NZF1 115 aa3.34□□□□□ -1.87
VPS41-209ENST00000457055 VWFP04275 2813 aa3.34□□□□□ -1.88
VPS41-209ENST00000457055 IGKV3-7A0A075B6H7 116 aa3.33□□□□□ -1.88
VPS41-209ENST00000457055 TRBV6-1A0A0K0K1D8 114 aa3.33□□□□□ -1.88
VPS41-209ENST00000457055 H0Y9P7 68 aa3.33□□□□□ -1.88
VPS41-209ENST00000457055 MGPP08493 103 aa3.33□□□□□ -1.88
VPS41-209ENST00000457055 C9orf129Q5T035 196 aaKnown RBP3.33□□□□□ -1.88
VPS41-209ENST00000457055 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
VPS41-209ENST00000457055 ARFGEF3Q5TH69 2177 aa3.33□□□□□ -1.88
VPS41-209ENST00000457055 A0A1W2PPR1 153 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms