RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
MSH6-207ENST00000456246 NPC2P61916 151 aa10.27□□□□□ -0.77
MSH6-207ENST00000456246 SPANXCQ9NY87 97 aa10.27□□□□□ -0.77
MSH6-207ENST00000456246 IGLV7-46A0A075B6I9 117 aa10.26□□□□□ -0.77
MSH6-207ENST00000456246 ZNF815PA8K554 130 aa10.26□□□□□ -0.77
MSH6-207ENST00000456246 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
MSH6-207ENST00000456246 C3orf79P0CE67 100 aa10.26□□□□□ -0.77
MSH6-207ENST00000456246 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
MSH6-207ENST00000456246 GAGE2AQ6NT46 116 aa10.26□□□□□ -0.77
MSH6-207ENST00000456246 Q8NBF4 154 aa10.26□□□□□ -0.77
MSH6-207ENST00000456246 LINC00308Q8TCZ7 52 aa10.26□□□□□ -0.77
MSH6-207ENST00000456246 Q9BRP9 147 aa10.26□□□□□ -0.77
MSH6-207ENST00000456246 SPINK1P00995 79 aa10.25□□□□□ -0.77
MSH6-207ENST00000456246 LITAFQ99732 161 aa10.25□□□□□ -0.77
MSH6-207ENST00000456246 C20orf202A1L168 122 aa10.24□□□□□ -0.77
MSH6-207ENST00000456246 EIF4EBP3O60516 100 aaPredicted RBP10.24□□□□□ -0.77
MSH6-207ENST00000456246 ERC2-IT1O76042 136 aa10.24□□□□□ -0.77
MSH6-207ENST00000456246 FP248Q71RG6 208 aaPredicted RBP10.24□□□□□ -0.77
MSH6-207ENST00000456246 C5orf52A6NGY3 159 aa10.23□□□□□ -0.77
MSH6-207ENST00000456246 AKR1D1P51857 326 aa10.23□□□□□ -0.77
MSH6-207ENST00000456246 KRTDAPP60985 99 aa10.23□□□□□ -0.77
MSH6-207ENST00000456246 SSBP3-AS1Q7Z2R9 100 aa10.23□□□□□ -0.77
MSH6-207ENST00000456246 SPANXDQ9BXN6 97 aa10.22□□□□□ -0.77
MSH6-207ENST00000456246 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
MSH6-207ENST00000456246 A0A0U1RQV1 116 aa10.21□□□□□ -0.77
MSH6-207ENST00000456246 RPS29P62273 56 aaKnown RBP10.2□□□□□ -0.78
MSH6-207ENST00000456246 MOBPQ13875 183 aa10.2□□□□□ -0.78
MSH6-207ENST00000456246 LINC00518Q8N0U6 118 aa10.2□□□□□ -0.78
MSH6-207ENST00000456246 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
MSH6-207ENST00000456246 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
MSH6-207ENST00000456246 IGLV9-49A0A0B4J1Y8 123 aa10.19□□□□□ -0.78
MSH6-207ENST00000456246 SCGB1D4Q6XE38 83 aa10.18□□□□□ -0.78
MSH6-207ENST00000456246 TTTY13Q9BZ97 58 aa10.17□□□□□ -0.78
MSH6-207ENST00000456246 DHRS4-AS1Q9P1J3 65 aa10.16□□□□□ -0.78
MSH6-207ENST00000456246 Q6ZVH6 145 aa10.15□□□□□ -0.78
MSH6-207ENST00000456246 SLC25A34Q6PIV7 304 aa10.14□□□□□ -0.79
MSH6-207ENST00000456246 MUC2Q02817 5179 aa10.13□□□□□ -0.79
MSH6-207ENST00000456246 IFITM1P13164 125 aa10.13□□□□□ -0.79
MSH6-207ENST00000456246 SNRPEP62304 92 aaKnown RBP10.13□□□□□ -0.79
MSH6-207ENST00000456246 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
MSH6-207ENST00000456246 ANKRD39Q53RE8 183 aa10.12□□□□□ -0.79
MSH6-207ENST00000456246 SPRR1BP22528 89 aa10.11□□□□□ -0.79
MSH6-207ENST00000456246 ELOF1P60002 83 aaKnown RBP10.11□□□□□ -0.79
MSH6-207ENST00000456246 ST20-AS1Q8NBB2 130 aa10.11□□□□□ -0.79
MSH6-207ENST00000456246 SLC25A20O43772 301 aa10.1□□□□□ -0.79
MSH6-207ENST00000456246 COX7BP24311 80 aa10.1□□□□□ -0.79
MSH6-207ENST00000456246 C6orf99Q4VX62 202 aa10.1□□□□□ -0.79
MSH6-207ENST00000456246 TRBV7-6A0A0J9YX20 115 aa10.09□□□□□ -0.79
MSH6-207ENST00000456246 ATOH7Q8N100 152 aa10.09□□□□□ -0.79
MSH6-207ENST00000456246 Q8N377 158 aa10.09□□□□□ -0.79
MSH6-207ENST00000456246 KRTAP13-3Q3SY46 172 aa10.08□□□□□ -0.8
MSH6-207ENST00000456246 LAMTOR3Q9UHA4 124 aa10.06□□□□□ -0.8
MSH6-207ENST00000456246 A0A1B0GWB2 263 aa10.05□□□□□ -0.8
MSH6-207ENST00000456246 S100A1P23297 94 aa10.05□□□□□ -0.8
MSH6-207ENST00000456246 S100A2P29034 98 aa10.05□□□□□ -0.8
MSH6-207ENST00000456246 PCP2Q8IVA1 136 aa10.05□□□□□ -0.8
MSH6-207ENST00000456246 A6NDN8 102 aa10.04□□□□□ -0.8
MSH6-207ENST00000456246 MUSTN1Q8IVN3 82 aa10.03□□□□□ -0.8
MSH6-207ENST00000456246 HIST3H2BBQ8N257 126 aa10.03□□□□□ -0.8
MSH6-207ENST00000456246 LIMD2Q9BT23 127 aa10.03□□□□□ -0.8
MSH6-207ENST00000456246 TRAV13-2A0A0B4J235 113 aa10.02□□□□□ -0.81
MSH6-207ENST00000456246 A4D1N5 150 aa10.02□□□□□ -0.81
MSH6-207ENST00000456246 HSBP1L1C9JCN9 74 aa10.02□□□□□ -0.81
MSH6-207ENST00000456246 TAL2Q16559 108 aa10.02□□□□□ -0.81
MSH6-207ENST00000456246 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
MSH6-207ENST00000456246 TEX49A0A1B0GTD5 131 aa10.01□□□□□ -0.81
MSH6-207ENST00000456246 S100A6P06703 90 aa9.99□□□□□ -0.81
MSH6-207ENST00000456246 NHP2Q9NX24 153 aaKnown RBP9.99□□□□□ -0.81
MSH6-207ENST00000456246 MUC17Q685J3 4493 aa9.99□□□□□ -0.81
MSH6-207ENST00000456246 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
MSH6-207ENST00000456246 CD164Q04900 197 aa9.97□□□□□ -0.81
MSH6-207ENST00000456246 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
MSH6-207ENST00000456246 DEFB105AQ8NG35 78 aa9.97□□□□□ -0.81
MSH6-207ENST00000456246 PRO1933Q9H354 126 aa9.97□□□□□ -0.81
MSH6-207ENST00000456246 IGLV5-48A0A075B6I7 105 aa9.96□□□□□ -0.82
MSH6-207ENST00000456246 SEC61BP60468 96 aaKnown RBP9.96□□□□□ -0.82
MSH6-207ENST00000456246 Q1RN00 199 aa9.95□□□□□ -0.82
MSH6-207ENST00000456246 SMIM11BQ8TCY0 68 aa9.94□□□□□ -0.82
MSH6-207ENST00000456246 VAMP3Q15836 100 aa9.93□□□□□ -0.82
MSH6-207ENST00000456246 H7C2G1 150 aa9.91□□□□□ -0.82
MSH6-207ENST00000456246 LINC01547P58512 204 aaPredicted RBP9.91□□□□□ -0.82
MSH6-207ENST00000456246 HRCT1Q6UXD1 115 aa9.91□□□□□ -0.82
MSH6-207ENST00000456246 XP32Q5T750 250 aa9.9□□□□□ -0.82
MSH6-207ENST00000456246 SMIM29Q86T20 159 aa9.9□□□□□ -0.82
MSH6-207ENST00000456246 Q5XG85 94 aa9.89□□□□□ -0.83
MSH6-207ENST00000456246 FAT4Q6V0I7 4981 aa9.89□□□□□ -0.83
MSH6-207ENST00000456246 LCE2AQ5TA79 106 aaPredicted RBP9.88□□□□□ -0.83
MSH6-207ENST00000456246 SCGB1D1O95968 90 aa9.87□□□□□ -0.83
MSH6-207ENST00000456246 F8WEM9 126 aa9.84□□□□□ -0.83
MSH6-207ENST00000456246 LINC00575Q6W349 94 aa9.84□□□□□ -0.83
MSH6-207ENST00000456246 COX8AP10176 69 aa9.83□□□□□ -0.84
MSH6-207ENST00000456246 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
MSH6-207ENST00000456246 hADV29S1A0JD25 119 aa9.82□□□□□ -0.84
MSH6-207ENST00000456246 DLEU1O43261 78 aa9.82□□□□□ -0.84
MSH6-207ENST00000456246 BVES-AS1Q5T3Y7 98 aa9.8□□□□□ -0.84
MSH6-207ENST00000456246 Q6ZQY7 126 aa9.8□□□□□ -0.84
MSH6-207ENST00000456246 TCL1BO95988 128 aa9.78□□□□□ -0.84
MSH6-207ENST00000456246 C1orf195Q5TG92 126 aa9.77□□□□□ -0.85
MSH6-207ENST00000456246 Q6JHZ5 121 aa9.77□□□□□ -0.85
MSH6-207ENST00000456246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms