RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 C18orf32Q8TCD1 76 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 TRAPPC1Q9Y5R8 145 aa4.49□□□□□ -1.69
NIF3L1-209ENST00000454952 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
NIF3L1-209ENST00000454952 TRBV10-3A0A0K0K1G6 114 aa4.48□□□□□ -1.69
NIF3L1-209ENST00000454952 PMCHL1Q16048 86 aa4.48□□□□□ -1.69
NIF3L1-209ENST00000454952 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
NIF3L1-209ENST00000454952 TRBV10-2A0A0K0K1G8 114 aa4.47□□□□□ -1.69
NIF3L1-209ENST00000454952 MYMXA0A1B0GTQ4 84 aa4.47□□□□□ -1.69
NIF3L1-209ENST00000454952 IFITM2Q01629 132 aa4.47□□□□□ -1.69
NIF3L1-209ENST00000454952 JOSD1Q15040 202 aaPredicted RBP4.47□□□□□ -1.69
NIF3L1-209ENST00000454952 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
NIF3L1-209ENST00000454952 RPS10P5Q9NQ39 176 aa4.47□□□□□ -1.69
NIF3L1-209ENST00000454952 DDTP30046 118 aa4.46□□□□□ -1.7
NIF3L1-209ENST00000454952 Q6ZRX8 168 aa4.46□□□□□ -1.7
NIF3L1-209ENST00000454952 IFI27L1Q96BM0 104 aa4.46□□□□□ -1.7
NIF3L1-209ENST00000454952 CHCHD1Q96BP2 118 aaKnown RBP4.46□□□□□ -1.7
NIF3L1-209ENST00000454952 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.7
NIF3L1-209ENST00000454952 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
NIF3L1-209ENST00000454952 CBY1Q9Y3M2 126 aa4.46□□□□□ -1.7
NIF3L1-209ENST00000454952 LOC107984156A0A0G2JMH3 177 aa4.45□□□□□ -1.7
NIF3L1-209ENST00000454952 C5orf52A6NGY3 159 aa4.45□□□□□ -1.7
NIF3L1-209ENST00000454952 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
NIF3L1-209ENST00000454952 C9orf153Q5TBE3 101 aa4.45□□□□□ -1.7
NIF3L1-209ENST00000454952 COMMD7Q86VX2 200 aa4.45□□□□□ -1.7
NIF3L1-209ENST00000454952 ARL17AQ8IVW1 177 aa4.45□□□□□ -1.7
NIF3L1-209ENST00000454952 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
NIF3L1-209ENST00000454952 SPANXB1Q9NS25 103 aaPredicted RBP4.45□□□□□ -1.7
NIF3L1-209ENST00000454952 S100A7L2Q5SY68 101 aa4.44□□□□□ -1.7
NIF3L1-209ENST00000454952 C10orf91Q5T1B1 145 aa4.44□□□□□ -1.7
NIF3L1-209ENST00000454952 SLC25A34Q6PIV7 304 aa4.44□□□□□ -1.7
NIF3L1-209ENST00000454952 LIMD2Q9BT23 127 aa4.44□□□□□ -1.7
NIF3L1-209ENST00000454952 ERC2-IT1O76042 136 aa4.43□□□□□ -1.7
NIF3L1-209ENST00000454952 NDUFC2O95298 119 aa4.43□□□□□ -1.7
NIF3L1-209ENST00000454952 HINT1P49773 126 aaPredicted RBP4.43□□□□□ -1.7
NIF3L1-209ENST00000454952 Q9BRP9 147 aa4.43□□□□□ -1.7
NIF3L1-209ENST00000454952 TRAV23DV6A0A075B6W5 121 aa4.42□□□□□ -1.7
NIF3L1-209ENST00000454952 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
NIF3L1-209ENST00000454952 IGLV6-57P01721 117 aa4.42□□□□□ -1.7
NIF3L1-209ENST00000454952 PLNP26678 52 aa4.42□□□□□ -1.7
NIF3L1-209ENST00000454952 NMUP48645 174 aa4.42□□□□□ -1.7
NIF3L1-209ENST00000454952 HERVK_113P61574 105 aa4.42□□□□□ -1.7
NIF3L1-209ENST00000454952 LEPROTO15243 131 aa4.41□□□□□ -1.7
NIF3L1-209ENST00000454952 HSBP1O75506 76 aa4.41□□□□□ -1.7
NIF3L1-209ENST00000454952 NDUFA5Q16718 116 aa4.41□□□□□ -1.7
NIF3L1-209ENST00000454952 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
NIF3L1-209ENST00000454952 ZNF73O43830 326 aaPredicted RBP4.4□□□□□ -1.71
NIF3L1-209ENST00000454952 SNAPINO95295 136 aa4.4□□□□□ -1.71
NIF3L1-209ENST00000454952 LGALS3P17931 250 aaKnown RBP4.4□□□□□ -1.71
NIF3L1-209ENST00000454952 IGLV8-61A0A075B6I0 122 aa4.39□□□□□ -1.71
NIF3L1-209ENST00000454952 J3QQQ9 107 aa4.39□□□□□ -1.71
NIF3L1-209ENST00000454952 SVBPQ8N300 66 aa4.39□□□□□ -1.71
NIF3L1-209ENST00000454952 LAMTOR3Q9UHA4 124 aa4.39□□□□□ -1.71
NIF3L1-209ENST00000454952 H0Y8G0 127 aa4.38□□□□□ -1.71
NIF3L1-209ENST00000454952 SPRR1BP22528 89 aa4.38□□□□□ -1.71
NIF3L1-209ENST00000454952 PCOTHQ58A44 107 aa4.38□□□□□ -1.71
NIF3L1-209ENST00000454952 DHRS4-AS1Q9P1J3 65 aa4.38□□□□□ -1.71
NIF3L1-209ENST00000454952 HSPB8Q9UJY1 196 aa4.38□□□□□ -1.71
NIF3L1-209ENST00000454952 DPM2O94777 84 aa4.37□□□□□ -1.71
NIF3L1-209ENST00000454952 LEPROTL1O95214 131 aa4.37□□□□□ -1.71
NIF3L1-209ENST00000454952 APOC3P02656 99 aa4.37□□□□□ -1.71
NIF3L1-209ENST00000454952 TSPEAR-AS2P59090 65 aa4.37□□□□□ -1.71
NIF3L1-209ENST00000454952 MT1HP80294 61 aa4.37□□□□□ -1.71
NIF3L1-209ENST00000454952 CD164Q04900 197 aa4.37□□□□□ -1.71
NIF3L1-209ENST00000454952 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
NIF3L1-209ENST00000454952 ST20-AS1Q8NBB2 130 aa4.36□□□□□ -1.71
NIF3L1-209ENST00000454952 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
NIF3L1-209ENST00000454952 C9orf92A6NGG3 77 aa4.35□□□□□ -1.71
NIF3L1-209ENST00000454952 IGKCP01834 107 aa4.35□□□□□ -1.71
NIF3L1-209ENST00000454952 PRO1933Q9H354 126 aa4.35□□□□□ -1.71
NIF3L1-209ENST00000454952 H7C2G1 150 aa4.34□□□□□ -1.71
NIF3L1-209ENST00000454952 M0R2T5 61 aa4.34□□□□□ -1.71
NIF3L1-209ENST00000454952 Q5XG85 94 aa4.34□□□□□ -1.71
NIF3L1-209ENST00000454952 HRCT1Q6UXD1 115 aa4.34□□□□□ -1.71
NIF3L1-209ENST00000454952 OR13C6PQ8NH95 151 aa4.34□□□□□ -1.71
NIF3L1-209ENST00000454952 SPANXDQ9BXN6 97 aa4.34□□□□□ -1.71
NIF3L1-209ENST00000454952 SPANXCQ9NY87 97 aa4.34□□□□□ -1.71
NIF3L1-209ENST00000454952 A0A0J9YXY3 114 aa4.33□□□□□ -1.72
NIF3L1-209ENST00000454952 NPC2P61916 151 aa4.33□□□□□ -1.72
NIF3L1-209ENST00000454952 TAL2Q16559 108 aa4.33□□□□□ -1.72
NIF3L1-209ENST00000454952 SOSTDC1Q6X4U4 206 aa4.33□□□□□ -1.72
NIF3L1-209ENST00000454952 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
NIF3L1-209ENST00000454952 YPEL4Q96NS1 127 aa4.33□□□□□ -1.72
NIF3L1-209ENST00000454952 TEX49A0A1B0GTD5 131 aa4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 E9PLD3 99 aa4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 TIMM17BO60830 172 aa4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 SERF1AO75920 110 aa4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 COX7BP24311 80 aa4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 AKR1D1P51857 326 aa4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 LINC00518Q8N0U6 118 aa4.32□□□□□ -1.72
NIF3L1-209ENST00000454952 ELOF1P60002 83 aaKnown RBP4.31□□□□□ -1.72
NIF3L1-209ENST00000454952 LINC00308Q8TCZ7 52 aa4.31□□□□□ -1.72
NIF3L1-209ENST00000454952 TRBV7-6A0A0J9YX20 115 aa4.3□□□□□ -1.72
NIF3L1-209ENST00000454952 TRGC2P03986 189 aa4.3□□□□□ -1.72
NIF3L1-209ENST00000454952 FABP4P15090 132 aa4.3□□□□□ -1.72
NIF3L1-209ENST00000454952 RPL37P61927 97 aaKnown RBP4.3□□□□□ -1.72
NIF3L1-209ENST00000454952 Q1RN00 199 aa4.3□□□□□ -1.72
NIF3L1-209ENST00000454952 COPS9Q8WXC6 57 aa4.3□□□□□ -1.72
NIF3L1-209ENST00000454952 PMCHL2Q9BQD1 86 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms