RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
TNFRSF25-208ENST00000453341 PLNP26678 52 aa11.67□□□□□ -0.54
TNFRSF25-208ENST00000453341 C9orf153Q5TBE3 101 aa11.67□□□□□ -0.54
TNFRSF25-208ENST00000453341 LEPROTO15243 131 aa11.66□□□□□ -0.54
TNFRSF25-208ENST00000453341 ATP6V1G1O75348 118 aa11.66□□□□□ -0.54
TNFRSF25-208ENST00000453341 DPM2O94777 84 aa11.66□□□□□ -0.54
TNFRSF25-208ENST00000453341 IGKCP01834 107 aa11.65□□□□□ -0.54
TNFRSF25-208ENST00000453341 HERV-K104P63124 156 aa11.65□□□□□ -0.54
TNFRSF25-208ENST00000453341 MIR7-3HGQ8N6C7 128 aa11.65□□□□□ -0.54
TNFRSF25-208ENST00000453341 MYMXA0A1B0GTQ4 84 aa11.64□□□□□ -0.55
TNFRSF25-208ENST00000453341 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
TNFRSF25-208ENST00000453341 J3QQQ9 107 aa11.62□□□□□ -0.55
TNFRSF25-208ENST00000453341 COX6B2Q6YFQ2 88 aa11.62□□□□□ -0.55
TNFRSF25-208ENST00000453341 Q6ZRX8 168 aa11.61□□□□□ -0.55
TNFRSF25-208ENST00000453341 HERVK_113P61574 105 aa11.6□□□□□ -0.55
TNFRSF25-208ENST00000453341 LINC00587B1AMM8 73 aa11.58□□□□□ -0.56
TNFRSF25-208ENST00000453341 SYS1-DBNDD2H3BUS1 97 aa11.58□□□□□ -0.56
TNFRSF25-208ENST00000453341 LGALS3P17931 250 aaKnown RBP11.58□□□□□ -0.56
TNFRSF25-208ENST00000453341 S100A12P80511 92 aa11.58□□□□□ -0.56
TNFRSF25-208ENST00000453341 IGLV6-57P01721 117 aa11.56□□□□□ -0.56
TNFRSF25-208ENST00000453341 DDTP30046 118 aa11.56□□□□□ -0.56
TNFRSF25-208ENST00000453341 HRCT1Q6UXD1 115 aa11.56□□□□□ -0.56
TNFRSF25-208ENST00000453341 ST20-AS1Q8NBB2 130 aa11.56□□□□□ -0.56
TNFRSF25-208ENST00000453341 LIMD2Q9BT23 127 aa11.55□□□□□ -0.56
TNFRSF25-208ENST00000453341 NMUP48645 174 aa11.54□□□□□ -0.56
TNFRSF25-208ENST00000453341 FCGBPQ9Y6R7 5405 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF25-208ENST00000453341 E9PLD3 99 aa11.53□□□□□ -0.56
TNFRSF25-208ENST00000453341 LINC01545Q5VT33 79 aa11.52□□□□□ -0.57
TNFRSF25-208ENST00000453341 LOC107984156A0A0G2JMH3 177 aa11.5□□□□□ -0.57
TNFRSF25-208ENST00000453341 A0A0J9YXY3 114 aa11.5□□□□□ -0.57
TNFRSF25-208ENST00000453341 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
TNFRSF25-208ENST00000453341 COA6Q5JTJ3 125 aaKnown RBP11.5□□□□□ -0.57
TNFRSF25-208ENST00000453341 PET117Q6UWS5 81 aa11.5□□□□□ -0.57
TNFRSF25-208ENST00000453341 ARL17AQ8IVW1 177 aa11.5□□□□□ -0.57
TNFRSF25-208ENST00000453341 TRBV10-2A0A0K0K1G8 114 aa11.49□□□□□ -0.57
TNFRSF25-208ENST00000453341 NPC2P61916 151 aa11.49□□□□□ -0.57
TNFRSF25-208ENST00000453341 RPL37P61927 97 aaKnown RBP11.49□□□□□ -0.57
TNFRSF25-208ENST00000453341 ADAMTSL4-AS1Q5T5F5 129 aa11.49□□□□□ -0.57
TNFRSF25-208ENST00000453341 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF25-208ENST00000453341 KRTDAPP60985 99 aa11.47□□□□□ -0.57
TNFRSF25-208ENST00000453341 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
TNFRSF25-208ENST00000453341 JOSD1Q15040 202 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF25-208ENST00000453341 MIEN1Q9BRT3 115 aa11.46□□□□□ -0.57
TNFRSF25-208ENST00000453341 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
TNFRSF25-208ENST00000453341 TRAV23DV6A0A075B6W5 121 aa11.43□□□□□ -0.58
TNFRSF25-208ENST00000453341 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF25-208ENST00000453341 SPRR1BP22528 89 aa11.42□□□□□ -0.58
TNFRSF25-208ENST00000453341 LITAFQ99732 161 aa11.42□□□□□ -0.58
TNFRSF25-208ENST00000453341 C5orf52A6NGY3 159 aa11.41□□□□□ -0.58
TNFRSF25-208ENST00000453341 NDUFC2O95298 119 aa11.41□□□□□ -0.58
TNFRSF25-208ENST00000453341 S100A7L2Q5SY68 101 aa11.41□□□□□ -0.58
TNFRSF25-208ENST00000453341 ZNF815PA8K554 130 aa11.4□□□□□ -0.58
TNFRSF25-208ENST00000453341 ZNF73O43830 326 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF25-208ENST00000453341 ATOH7Q8N100 152 aa11.38□□□□□ -0.59
TNFRSF25-208ENST00000453341 KRTAP9-8Q9BYQ0 159 aa11.38□□□□□ -0.59
TNFRSF25-208ENST00000453341 SYNE2Q8WXH0 6885 aaKnown RBP11.37□□□□□ -0.59
TNFRSF25-208ENST00000453341 H7C2G1 150 aa11.37□□□□□ -0.59
TNFRSF25-208ENST00000453341 C1orf195Q5TG92 126 aa11.37□□□□□ -0.59
TNFRSF25-208ENST00000453341 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
TNFRSF25-208ENST00000453341 TIMM17BO60830 172 aa11.36□□□□□ -0.59
TNFRSF25-208ENST00000453341 ANKRD39Q53RE8 183 aa11.36□□□□□ -0.59
TNFRSF25-208ENST00000453341 CFC1P0CG37 223 aa11.35□□□□□ -0.59
TNFRSF25-208ENST00000453341 S100A1P23297 94 aa11.35□□□□□ -0.59
TNFRSF25-208ENST00000453341 SLC25A34Q6PIV7 304 aa11.35□□□□□ -0.59
TNFRSF25-208ENST00000453341 C20orf202A1L168 122 aa11.34□□□□□ -0.59
TNFRSF25-208ENST00000453341 CD164Q04900 197 aa11.34□□□□□ -0.59
TNFRSF25-208ENST00000453341 Q5XG85 94 aa11.33□□□□□ -0.6
TNFRSF25-208ENST00000453341 Q6Q795 121 aa11.33□□□□□ -0.6
TNFRSF25-208ENST00000453341 LAMTOR3Q9UHA4 124 aa11.33□□□□□ -0.6
TNFRSF25-208ENST00000453341 SPANXCQ9NY87 97 aa11.32□□□□□ -0.6
TNFRSF25-208ENST00000453341 HIST3H2BBQ8N257 126 aa11.31□□□□□ -0.6
TNFRSF25-208ENST00000453341 OR13C6PQ8NH95 151 aa11.29□□□□□ -0.6
TNFRSF25-208ENST00000453341 Q1RN00 199 aa11.28□□□□□ -0.6
TNFRSF25-208ENST00000453341 SCGB1D4Q6XE38 83 aa11.28□□□□□ -0.6
TNFRSF25-208ENST00000453341 PCP2Q8IVA1 136 aa11.28□□□□□ -0.6
TNFRSF25-208ENST00000453341 MACF1Q9UPN3 7388 aaKnown RBP11.27□□□□□ -0.6
TNFRSF25-208ENST00000453341 HINT1P49773 126 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF25-208ENST00000453341 KRTAP19-1Q8IUB9 90 aa11.27□□□□□ -0.61
TNFRSF25-208ENST00000453341 HIST1H2BLQ99880 126 aa11.27□□□□□ -0.61
TNFRSF25-208ENST00000453341 PRO1933Q9H354 126 aa11.27□□□□□ -0.61
TNFRSF25-208ENST00000453341 SMIM29Q86T20 159 aa11.26□□□□□ -0.61
TNFRSF25-208ENST00000453341 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
TNFRSF25-208ENST00000453341 S100A2P29034 98 aa11.25□□□□□ -0.61
TNFRSF25-208ENST00000453341 DHRS4-AS1Q9P1J3 65 aa11.25□□□□□ -0.61
TNFRSF25-208ENST00000453341 A0A0G2JQZ4 141 aa11.24□□□□□ -0.61
TNFRSF25-208ENST00000453341 S100A6P06703 90 aa11.21□□□□□ -0.61
TNFRSF25-208ENST00000453341 AKR1D1P51857 326 aa11.21□□□□□ -0.61
TNFRSF25-208ENST00000453341 MUSTN1Q8IVN3 82 aa11.2□□□□□ -0.62
TNFRSF25-208ENST00000453341 LINC00518Q8N0U6 118 aa11.2□□□□□ -0.62
TNFRSF25-208ENST00000453341 DEFB105AQ8NG35 78 aa11.2□□□□□ -0.62
TNFRSF25-208ENST00000453341 CBY1Q9Y3M2 126 aa11.2□□□□□ -0.62
TNFRSF25-208ENST00000453341 TAL2Q16559 108 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms