RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 MYMXA0A1B0GTQ4 84 aa6.09□□□□□ -1.43
USP1-204ENST00000452143 B5MCH6 92 aa6.09□□□□□ -1.43
USP1-204ENST00000452143 SLC25A20O43772 301 aa6.09□□□□□ -1.43
USP1-204ENST00000452143 IGLV9-49A0A0B4J1Y8 123 aa6.08□□□□□ -1.44
USP1-204ENST00000452143 LOC107984156A0A0G2JMH3 177 aa6.08□□□□□ -1.44
USP1-204ENST00000452143 Q6ZRX8 168 aa6.08□□□□□ -1.44
USP1-204ENST00000452143 ARL17AQ8IVW1 177 aa6.08□□□□□ -1.44
USP1-204ENST00000452143 DDTP30046 118 aa6.07□□□□□ -1.44
USP1-204ENST00000452143 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
USP1-204ENST00000452143 ERC2-IT1O76042 136 aa6.06□□□□□ -1.44
USP1-204ENST00000452143 Q9BRP9 147 aa6.06□□□□□ -1.44
USP1-204ENST00000452143 SPANXB1Q9NS25 103 aaPredicted RBP6.06□□□□□ -1.44
USP1-204ENST00000452143 SVBPQ8N300 66 aa6.05□□□□□ -1.44
USP1-204ENST00000452143 MIEN1Q9BRT3 115 aa6.05□□□□□ -1.44
USP1-204ENST00000452143 HSBP1O75506 76 aa6.04□□□□□ -1.44
USP1-204ENST00000452143 SNAPINO95295 136 aa6.04□□□□□ -1.44
USP1-204ENST00000452143 NDUFC2O95298 119 aa6.04□□□□□ -1.44
USP1-204ENST00000452143 APOC3P02656 99 aa6.04□□□□□ -1.44
USP1-204ENST00000452143 TSPEAR-AS2P59090 65 aa6.04□□□□□ -1.44
USP1-204ENST00000452143 JOSD1Q15040 202 aaPredicted RBP6.04□□□□□ -1.44
USP1-204ENST00000452143 NDUFA5Q16718 116 aa6.04□□□□□ -1.44
USP1-204ENST00000452143 LEPROTO15243 131 aa6.03□□□□□ -1.44
USP1-204ENST00000452143 IGLV6-57P01721 117 aa6.03□□□□□ -1.44
USP1-204ENST00000452143 PLNP26678 52 aa6.03□□□□□ -1.44
USP1-204ENST00000452143 NMUP48645 174 aa6.03□□□□□ -1.44
USP1-204ENST00000452143 S100A7L2Q5SY68 101 aa6.03□□□□□ -1.44
USP1-204ENST00000452143 C9orf153Q5TBE3 101 aa6.03□□□□□ -1.44
USP1-204ENST00000452143 TRAV23DV6A0A075B6W5 121 aa6.02□□□□□ -1.45
USP1-204ENST00000452143 C5orf52A6NGY3 159 aa6.02□□□□□ -1.45
USP1-204ENST00000452143 YPEL4Q96NS1 127 aa6.02□□□□□ -1.45
USP1-204ENST00000452143 TMA7Q9Y2S6 64 aaKnown RBP6.02□□□□□ -1.45
USP1-204ENST00000452143 H0Y8G0 127 aa6.01□□□□□ -1.45
USP1-204ENST00000452143 J3QQQ9 107 aa6.01□□□□□ -1.45
USP1-204ENST00000452143 HERVK_113P61574 105 aa6.01□□□□□ -1.45
USP1-204ENST00000452143 ZNF73O43830 326 aaPredicted RBP6□□□□□ -1.45
USP1-204ENST00000452143 LEPROTL1O95214 131 aa6□□□□□ -1.45
USP1-204ENST00000452143 CBY1Q9Y3M2 126 aa6□□□□□ -1.45
USP1-204ENST00000452143 LGALS3P17931 250 aaKnown RBP5.99□□□□□ -1.45
USP1-204ENST00000452143 LIMD2Q9BT23 127 aa5.99□□□□□ -1.45
USP1-204ENST00000452143 DPM2O94777 84 aa5.98□□□□□ -1.45
USP1-204ENST00000452143 SLC25A34Q6PIV7 304 aa5.98□□□□□ -1.45
USP1-204ENST00000452143 HINT1P49773 126 aaPredicted RBP5.97□□□□□ -1.45
USP1-204ENST00000452143 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
USP1-204ENST00000452143 HSPB8Q9UJY1 196 aa5.97□□□□□ -1.45
USP1-204ENST00000452143 IGKCP01834 107 aa5.96□□□□□ -1.46
USP1-204ENST00000452143 SPRR1BP22528 89 aa5.96□□□□□ -1.46
USP1-204ENST00000452143 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.46
USP1-204ENST00000452143 SERF1AO75920 110 aa5.95□□□□□ -1.46
USP1-204ENST00000452143 CFC1BP0CG36 223 aa5.95□□□□□ -1.46
USP1-204ENST00000452143 LINC00310P59036 64 aa5.95□□□□□ -1.46
USP1-204ENST00000452143 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
USP1-204ENST00000452143 SOSTDC1Q6X4U4 206 aa5.95□□□□□ -1.46
USP1-204ENST00000452143 A0A0J9YXY3 114 aa5.94□□□□□ -1.46
USP1-204ENST00000452143 SPANXCQ9NY87 97 aa5.94□□□□□ -1.46
USP1-204ENST00000452143 DHRS4-AS1Q9P1J3 65 aa5.94□□□□□ -1.46
USP1-204ENST00000452143 E9PLD3 99 aa5.93□□□□□ -1.46
USP1-204ENST00000452143 TRGC2P03986 189 aa5.93□□□□□ -1.46
USP1-204ENST00000452143 NPC2P61916 151 aa5.93□□□□□ -1.46
USP1-204ENST00000452143 ADAMTSL4-AS1Q5T5F5 129 aa5.93□□□□□ -1.46
USP1-204ENST00000452143 PMCHL2Q9BQD1 86 aa5.93□□□□□ -1.46
USP1-204ENST00000452143 IGLV8-61A0A075B6I0 122 aa5.92□□□□□ -1.46
USP1-204ENST00000452143 FABP4P15090 132 aa5.92□□□□□ -1.46
USP1-204ENST00000452143 MT1HP80294 61 aa5.92□□□□□ -1.46
USP1-204ENST00000452143 PCOTHQ58A44 107 aa5.92□□□□□ -1.46
USP1-204ENST00000452143 LAMTOR3Q9UHA4 124 aa5.92□□□□□ -1.46
USP1-204ENST00000452143 CD164Q04900 197 aa5.91□□□□□ -1.46
USP1-204ENST00000452143 SPANXDQ9BXN6 97 aa5.91□□□□□ -1.46
USP1-204ENST00000452143 C9orf92A6NGG3 77 aa5.9□□□□□ -1.46
USP1-204ENST00000452143 TIMM17BO60830 172 aa5.9□□□□□ -1.46
USP1-204ENST00000452143 HRCT1Q6UXD1 115 aa5.9□□□□□ -1.46
USP1-204ENST00000452143 OR13C6PQ8NH95 151 aa5.9□□□□□ -1.46
USP1-204ENST00000452143 LINC00308Q8TCZ7 52 aa5.9□□□□□ -1.46
USP1-204ENST00000452143 ELOF1P60002 83 aaKnown RBP5.89□□□□□ -1.47
USP1-204ENST00000452143 LITAFQ99732 161 aa5.89□□□□□ -1.47
USP1-204ENST00000452143 COX7BP24311 80 aa5.88□□□□□ -1.47
USP1-204ENST00000452143 Q5XG85 94 aa5.88□□□□□ -1.47
USP1-204ENST00000452143 PRO1933Q9H354 126 aa5.88□□□□□ -1.47
USP1-204ENST00000452143 LINC00518Q8N0U6 118 aa5.87□□□□□ -1.47
USP1-204ENST00000452143 TEX49A0A1B0GTD5 131 aa5.86□□□□□ -1.47
USP1-204ENST00000452143 H7C2G1 150 aa5.86□□□□□ -1.47
USP1-204ENST00000452143 Q1RN00 199 aa5.86□□□□□ -1.47
USP1-204ENST00000452143 C6orf99Q4VX62 202 aa5.86□□□□□ -1.47
USP1-204ENST00000452143 TRBV7-6A0A0J9YX20 115 aa5.85□□□□□ -1.47
USP1-204ENST00000452143 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
USP1-204ENST00000452143 TAL2Q16559 108 aa5.85□□□□□ -1.47
USP1-204ENST00000452143 ZNF815PA8K554 130 aa5.84□□□□□ -1.47
USP1-204ENST00000452143 AKR1D1P51857 326 aa5.84□□□□□ -1.47
USP1-204ENST00000452143 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.47
USP1-204ENST00000452143 IGLV5-48A0A075B6I7 105 aa5.83□□□□□ -1.48
USP1-204ENST00000452143 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
USP1-204ENST00000452143 DEFB105AQ8NG35 78 aa5.83□□□□□ -1.48
USP1-204ENST00000452143 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
USP1-204ENST00000452143 A0A1B0GWB2 263 aa5.82□□□□□ -1.48
USP1-204ENST00000452143 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
USP1-204ENST00000452143 LINC01545Q5VT33 79 aa5.82□□□□□ -1.48
USP1-204ENST00000452143 SMIM29Q86T20 159 aa5.82□□□□□ -1.48
USP1-204ENST00000452143 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
USP1-204ENST00000452143 COLCA2A8K830 154 aa5.81□□□□□ -1.48
USP1-204ENST00000452143 M0R2T5 61 aa5.81□□□□□ -1.48
USP1-204ENST00000452143 PET117Q6UWS5 81 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms