RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 PET117Q6UWS5 81 aa10.44□□□□□ -0.74
CTNS-204ENST00000452111 ZNF706Q9Y5V0 76 aaPredicted RBP10.44□□□□□ -0.74
CTNS-204ENST00000452111 ADAMTSL4-AS1Q5T5F5 129 aa10.43□□□□□ -0.74
CTNS-204ENST00000452111 SOSTDC1Q6X4U4 206 aa10.43□□□□□ -0.74
CTNS-204ENST00000452111 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
CTNS-204ENST00000452111 EIF4EBP3O60516 100 aaPredicted RBP10.42□□□□□ -0.74
CTNS-204ENST00000452111 NDUFC2O95298 119 aa10.42□□□□□ -0.74
CTNS-204ENST00000452111 C3orf79P0CE67 100 aa10.41□□□□□ -0.74
CTNS-204ENST00000452111 S100A7L2Q5SY68 101 aa10.41□□□□□ -0.74
CTNS-204ENST00000452111 B5MCH6 92 aa10.4□□□□□ -0.74
CTNS-204ENST00000452111 KRTDAPP60985 99 aa10.4□□□□□ -0.74
CTNS-204ENST00000452111 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.74
CTNS-204ENST00000452111 PPDPFQ9H3Y8 114 aa10.4□□□□□ -0.74
CTNS-204ENST00000452111 IGLV6-57P01721 117 aa10.38□□□□□ -0.75
CTNS-204ENST00000452111 TRAV23DV6A0A075B6W5 121 aa10.37□□□□□ -0.75
CTNS-204ENST00000452111 ZNF815PA8K554 130 aa10.37□□□□□ -0.75
CTNS-204ENST00000452111 SCGB1D1O95968 90 aa10.37□□□□□ -0.75
CTNS-204ENST00000452111 LITAFQ99732 161 aa10.37□□□□□ -0.75
CTNS-204ENST00000452111 TTTY13Q9BZ97 58 aa10.37□□□□□ -0.75
CTNS-204ENST00000452111 ERC2-IT1O76042 136 aa10.36□□□□□ -0.75
CTNS-204ENST00000452111 TSTD3H0UI37 97 aa10.35□□□□□ -0.75
CTNS-204ENST00000452111 GAGE2AQ6NT46 116 aa10.35□□□□□ -0.75
CTNS-204ENST00000452111 Q6ZRX8 168 aa10.35□□□□□ -0.75
CTNS-204ENST00000452111 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
CTNS-204ENST00000452111 Q9BRP9 147 aa10.35□□□□□ -0.75
CTNS-204ENST00000452111 TIMM17BO60830 172 aa10.34□□□□□ -0.75
CTNS-204ENST00000452111 LINC00483Q53H64 154 aa10.33□□□□□ -0.76
CTNS-204ENST00000452111 SPANXCQ9NY87 97 aa10.33□□□□□ -0.76
CTNS-204ENST00000452111 C20orf202A1L168 122 aa10.32□□□□□ -0.76
CTNS-204ENST00000452111 ZNF73O43830 326 aaPredicted RBP10.32□□□□□ -0.76
CTNS-204ENST00000452111 SPAG11AQ6PDA7 123 aa10.32□□□□□ -0.76
CTNS-204ENST00000452111 Q8NBF4 154 aa10.32□□□□□ -0.76
CTNS-204ENST00000452111 CTAG1AP78358 180 aa10.31□□□□□ -0.76
CTNS-204ENST00000452111 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
CTNS-204ENST00000452111 C4orf48Q5BLP8 95 aa10.3□□□□□ -0.76
CTNS-204ENST00000452111 ATOH7Q8N100 152 aa10.3□□□□□ -0.76
CTNS-204ENST00000452111 IGLV9-49A0A0B4J1Y8 123 aa10.29□□□□□ -0.76
CTNS-204ENST00000452111 ANKRD39Q53RE8 183 aa10.29□□□□□ -0.76
CTNS-204ENST00000452111 MOBPQ13875 183 aa10.28□□□□□ -0.76
CTNS-204ENST00000452111 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
CTNS-204ENST00000452111 MUC2Q02817 5179 aa10.27□□□□□ -0.77
CTNS-204ENST00000452111 IGLV7-46A0A075B6I9 117 aa10.27□□□□□ -0.77
CTNS-204ENST00000452111 HINT1P49773 126 aaPredicted RBP10.27□□□□□ -0.77
CTNS-204ENST00000452111 PRO1933Q9H354 126 aa10.27□□□□□ -0.77
CTNS-204ENST00000452111 CBY1Q9Y3M2 126 aa10.27□□□□□ -0.77
CTNS-204ENST00000452111 VAMP8Q9BV40 100 aa10.26□□□□□ -0.77
CTNS-204ENST00000452111 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
CTNS-204ENST00000452111 ST20-AS1Q8NBB2 130 aa10.24□□□□□ -0.77
CTNS-204ENST00000452111 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
CTNS-204ENST00000452111 PCP2Q8IVA1 136 aa10.22□□□□□ -0.77
CTNS-204ENST00000452111 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
CTNS-204ENST00000452111 MUC17Q685J3 4493 aa10.21□□□□□ -0.77
CTNS-204ENST00000452111 SPINK1P00995 79 aa10.21□□□□□ -0.77
CTNS-204ENST00000452111 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.77
CTNS-204ENST00000452111 SSBP3-AS1Q7Z2R9 100 aa10.2□□□□□ -0.78
CTNS-204ENST00000452111 C6orf99Q4VX62 202 aa10.19□□□□□ -0.78
CTNS-204ENST00000452111 PAM16Q9Y3D7 125 aa10.19□□□□□ -0.78
CTNS-204ENST00000452111 SPATA45Q537H7 98 aa10.18□□□□□ -0.78
CTNS-204ENST00000452111 COPS9Q8WXC6 57 aa10.18□□□□□ -0.78
CTNS-204ENST00000452111 DHRS4-AS1Q9P1J3 65 aa10.18□□□□□ -0.78
CTNS-204ENST00000452111 IFITM1P13164 125 aa10.17□□□□□ -0.78
CTNS-204ENST00000452111 COX7BP24311 80 aa10.17□□□□□ -0.78
CTNS-204ENST00000452111 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
CTNS-204ENST00000452111 ELOF1P60002 83 aaKnown RBP10.16□□□□□ -0.78
CTNS-204ENST00000452111 Q6ZVH6 145 aa10.16□□□□□ -0.78
CTNS-204ENST00000452111 MUSTN1Q8IVN3 82 aa10.16□□□□□ -0.78
CTNS-204ENST00000452111 C14orf144Q96I85 54 aa10.16□□□□□ -0.78
CTNS-204ENST00000452111 A6NDN8 102 aa10.14□□□□□ -0.79
CTNS-204ENST00000452111 HSBP1L1C9JCN9 74 aa10.14□□□□□ -0.79
CTNS-204ENST00000452111 UQCR10Q9UDW1 63 aa10.14□□□□□ -0.79
CTNS-204ENST00000452111 RPS29P62273 56 aaKnown RBP10.13□□□□□ -0.79
CTNS-204ENST00000452111 SPRR1BP22528 89 aa10.12□□□□□ -0.79
CTNS-204ENST00000452111 Q8N377 158 aa10.12□□□□□ -0.79
CTNS-204ENST00000452111 SLC25A34Q6PIV7 304 aa10.11□□□□□ -0.79
CTNS-204ENST00000452111 DEFB105AQ8NG35 78 aa10.1□□□□□ -0.79
CTNS-204ENST00000452111 M0R143 59 aa10.09□□□□□ -0.79
CTNS-204ENST00000452111 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
CTNS-204ENST00000452111 LAMTOR3Q9UHA4 124 aa10.09□□□□□ -0.79
CTNS-204ENST00000452111 TRBV7-6A0A0J9YX20 115 aa10.08□□□□□ -0.8
CTNS-204ENST00000452111 A0A1B0GWB2 263 aa10.08□□□□□ -0.8
CTNS-204ENST00000452111 SLC25A20O43772 301 aa10.08□□□□□ -0.8
CTNS-204ENST00000452111 TAL2Q16559 108 aa10.08□□□□□ -0.8
CTNS-204ENST00000452111 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
CTNS-204ENST00000452111 A0A0U1RQV1 116 aa10.06□□□□□ -0.8
CTNS-204ENST00000452111 Q1RN00 199 aa10.06□□□□□ -0.8
CTNS-204ENST00000452111 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
CTNS-204ENST00000452111 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
CTNS-204ENST00000452111 TEX49A0A1B0GTD5 131 aa10.04□□□□□ -0.8
CTNS-204ENST00000452111 SNHG12Q9BXW3 62 aa10.03□□□□□ -0.8
CTNS-204ENST00000452111 FAT4Q6V0I7 4981 aa10.01□□□□□ -0.81
CTNS-204ENST00000452111 A4D1N5 150 aa10.01□□□□□ -0.81
CTNS-204ENST00000452111 COX8AP10176 69 aa10□□□□□ -0.81
CTNS-204ENST00000452111 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
CTNS-204ENST00000452111 IGLV5-48A0A075B6I7 105 aa9.99□□□□□ -0.81
CTNS-204ENST00000452111 SMIM29Q86T20 159 aa9.99□□□□□ -0.81
CTNS-204ENST00000452111 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
CTNS-204ENST00000452111 NHP2Q9NX24 153 aaKnown RBP9.98□□□□□ -0.81
CTNS-204ENST00000452111 DLEU1O43261 78 aa9.97□□□□□ -0.81
CTNS-204ENST00000452111 VAMP3Q15836 100 aa9.95□□□□□ -0.82
CTNS-204ENST00000452111 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms