RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 FAM236CP0DP71 79 aa4.32□□□□□ -1.72
USP46-202ENST00000451218 RPL18AQ02543 176 aaKnown RBP4.32□□□□□ -1.72
USP46-202ENST00000451218 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
USP46-202ENST00000451218 C9orf153Q5TBE3 101 aa4.32□□□□□ -1.72
USP46-202ENST00000451218 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
USP46-202ENST00000451218 APLNQ9ULZ1 77 aa4.31□□□□□ -1.72
USP46-202ENST00000451218 GAGE12HA6NDE8 117 aa4.31□□□□□ -1.72
USP46-202ENST00000451218 LY6G6CO95867 125 aa4.31□□□□□ -1.72
USP46-202ENST00000451218 UNQ6190/PRO20217Q6UXQ8 127 aa4.31□□□□□ -1.72
USP46-202ENST00000451218 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
USP46-202ENST00000451218 TRACP01848 142 aa4.31□□□□□ -1.72
USP46-202ENST00000451218 Q9HAA7 133 aa4.31□□□□□ -1.72
USP46-202ENST00000451218 hADV29S1A0JD25 119 aa4.3□□□□□ -1.72
USP46-202ENST00000451218 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
USP46-202ENST00000451218 C9orf129Q5T035 196 aaKnown RBP4.3□□□□□ -1.72
USP46-202ENST00000451218 PKHD1L1Q86WI1 4243 aa4.3□□□□□ -1.72
USP46-202ENST00000451218 TGP01266 2768 aa4.3□□□□□ -1.72
USP46-202ENST00000451218 RYR3Q15413 4870 aa4.3□□□□□ -1.72
USP46-202ENST00000451218 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
USP46-202ENST00000451218 C3orf84H3BNL1 204 aa4.3□□□□□ -1.72
USP46-202ENST00000451218 LST1O00453 97 aa4.3□□□□□ -1.72
USP46-202ENST00000451218 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
USP46-202ENST00000451218 F8W1H4 67 aa4.29□□□□□ -1.72
USP46-202ENST00000451218 ACYP1P07311 99 aa4.29□□□□□ -1.72
USP46-202ENST00000451218 CLEC2BQ92478 149 aa4.29□□□□□ -1.72
USP46-202ENST00000451218 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
USP46-202ENST00000451218 C1orf134Q5TEV5 83 aa4.29□□□□□ -1.72
USP46-202ENST00000451218 LINC00167Q96N53 147 aa4.29□□□□□ -1.72
USP46-202ENST00000451218 COX17Q14061 63 aa4.29□□□□□ -1.72
USP46-202ENST00000451218 APOBP04114 4563 aaKnown RBP4.28□□□□□ -1.72
USP46-202ENST00000451218 DIRC1Q969H9 104 aa4.28□□□□□ -1.72
USP46-202ENST00000451218 SMIM11BQ8TCY0 68 aa4.28□□□□□ -1.72
USP46-202ENST00000451218 LOC107984640A0A0U1RRK4 108 aa4.28□□□□□ -1.72
USP46-202ENST00000451218 GAGE2BQ13066 116 aa4.28□□□□□ -1.72
USP46-202ENST00000451218 ORMDL1Q9P0S3 153 aa4.28□□□□□ -1.72
USP46-202ENST00000451218 IGLV6-57P01721 117 aa4.27□□□□□ -1.73
USP46-202ENST00000451218 NREPQ16612 68 aa4.27□□□□□ -1.73
USP46-202ENST00000451218 Q6ZRP5 223 aa4.27□□□□□ -1.73
USP46-202ENST00000451218 Q6ZRU5 148 aa4.27□□□□□ -1.73
USP46-202ENST00000451218 A0A087WYN8 130 aa4.27□□□□□ -1.73
USP46-202ENST00000451218 NDUFC2O95298 119 aa4.27□□□□□ -1.73
USP46-202ENST00000451218 OBSCN-AS1Q96MR7 158 aa4.27□□□□□ -1.73
USP46-202ENST00000451218 HIGD2BQ4VC39 106 aa4.27□□□□□ -1.73
USP46-202ENST00000451218 DHRS4-AS1Q9P1J3 65 aa4.26□□□□□ -1.73
USP46-202ENST00000451218 HIST1H4AP62805 103 aaKnown RBP4.26□□□□□ -1.73
USP46-202ENST00000451218 WWC2-AS2Q96NR7 200 aa4.26□□□□□ -1.73
USP46-202ENST00000451218 SDIM1Q6ZPB5 146 aa4.26□□□□□ -1.73
USP46-202ENST00000451218 KRTAP21-3Q3LHN1 58 aa4.26□□□□□ -1.73
USP46-202ENST00000451218 PFN2P35080 140 aa4.25□□□□□ -1.73
USP46-202ENST00000451218 SPAG11BQ08648 103 aa4.25□□□□□ -1.73
USP46-202ENST00000451218 KRTAP4-16G5E9R7 235 aaPredicted RBP4.25□□□□□ -1.73
USP46-202ENST00000451218 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
USP46-202ENST00000451218 LINC00336Q6ZUF6 198 aa4.25□□□□□ -1.73
USP46-202ENST00000451218 LRCOL1A6NCL2 159 aa4.25□□□□□ -1.73
USP46-202ENST00000451218 TLX1NBP0CAT3 122 aa4.24□□□□□ -1.73
USP46-202ENST00000451218 Q6JHZ5 121 aa4.24□□□□□ -1.73
USP46-202ENST00000451218 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
USP46-202ENST00000451218 C2orf48Q96LS8 159 aa4.24□□□□□ -1.73
USP46-202ENST00000451218 EPM2AB3EWF7 344 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 XGP55808 180 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 TRBV10-2A0A0K0K1G8 114 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 C9JAW5 83 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 HAMPP81172 84 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 KRTAP11-1Q8IUC1 163 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 J3KT08 172 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 COX7BP24311 80 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 TEN1Q86WV5 123 aa4.23□□□□□ -1.73
USP46-202ENST00000451218 TEX49A0A1B0GTD5 131 aa4.22□□□□□ -1.73
USP46-202ENST00000451218 IGLV5-52A0A0A0MRZ9 124 aa4.22□□□□□ -1.73
USP46-202ENST00000451218 H0Y9J4 135 aa4.22□□□□□ -1.73
USP46-202ENST00000451218 BAALC-AS2P0C853 105 aa4.22□□□□□ -1.73
USP46-202ENST00000451218 SYCNQ0VAF6 134 aa4.22□□□□□ -1.73
USP46-202ENST00000451218 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
USP46-202ENST00000451218 LINC00846Q9NV44 126 aa4.22□□□□□ -1.73
USP46-202ENST00000451218 FAM168BA1KXE4 195 aa4.22□□□□□ -1.73
USP46-202ENST00000451218 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.22□□□□□ -1.73
USP46-202ENST00000451218 IGKV4-1P06312 121 aa4.21□□□□□ -1.74
USP46-202ENST00000451218 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
USP46-202ENST00000451218 NDUFC2-KCTD14E9PQ53 114 aa4.21□□□□□ -1.74
USP46-202ENST00000451218 TMEM256-PLSCR3K7ERE1 68 aa4.21□□□□□ -1.74
USP46-202ENST00000451218 PANO1I0J062 215 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 FAM240AA0A1B0GVK7 77 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 NCR3O14931 201 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 LINC01547P58512 204 aaPredicted RBP4.2□□□□□ -1.74
USP46-202ENST00000451218 Q6ZR54 194 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 FAM19A1Q7Z5A9 133 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 SPRR1AP35321 89 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 SMCR5Q8TEV8 140 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 XAGE1AQ9HD64 81 aa4.2□□□□□ -1.74
USP46-202ENST00000451218 CNBPP62633 177 aaKnown RBP4.19□□□□□ -1.74
USP46-202ENST00000451218 H3BT86 120 aa4.19□□□□□ -1.74
USP46-202ENST00000451218 TRBV10-3A0A0K0K1G6 114 aa4.18□□□□□ -1.74
USP46-202ENST00000451218 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
USP46-202ENST00000451218 GAGE2AQ6NT46 116 aa4.18□□□□□ -1.74
USP46-202ENST00000451218 Q8N9L7 120 aa4.18□□□□□ -1.74
USP46-202ENST00000451218 SPAG11AQ6PDA7 123 aa4.18□□□□□ -1.74
USP46-202ENST00000451218 LINC00575Q6W349 94 aa4.17□□□□□ -1.74
USP46-202ENST00000451218 Q8N814 137 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms