RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 SOSTDC1Q6X4U4 206 aa9□□□□□ -0.97
LIMS1-210ENST00000449684 RETNLBQ9BQ08 111 aa9□□□□□ -0.97
LIMS1-210ENST00000449684 CTAG1AP78358 180 aa8.99□□□□□ -0.97
LIMS1-210ENST00000449684 OR13C6PQ8NH95 151 aa8.99□□□□□ -0.97
LIMS1-210ENST00000449684 TIMM17BO60830 172 aa8.98□□□□□ -0.97
LIMS1-210ENST00000449684 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
LIMS1-210ENST00000449684 Q6ZRX8 168 aa8.98□□□□□ -0.97
LIMS1-210ENST00000449684 ZNF73O43830 326 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-210ENST00000449684 LINC00308Q8TCZ7 52 aa8.97□□□□□ -0.97
LIMS1-210ENST00000449684 SPANXCQ9NY87 97 aa8.97□□□□□ -0.97
LIMS1-210ENST00000449684 EIF4EBP3O60516 100 aaPredicted RBP8.96□□□□□ -0.98
LIMS1-210ENST00000449684 SCGB1D4Q6XE38 83 aa8.96□□□□□ -0.98
LIMS1-210ENST00000449684 ERC2-IT1O76042 136 aa8.95□□□□□ -0.98
LIMS1-210ENST00000449684 Q8NBF4 154 aa8.95□□□□□ -0.98
LIMS1-210ENST00000449684 TTTY13Q9BZ97 58 aa8.95□□□□□ -0.98
LIMS1-210ENST00000449684 IGLV9-49A0A0B4J1Y8 123 aa8.94□□□□□ -0.98
LIMS1-210ENST00000449684 AKR1D1P51857 326 aa8.94□□□□□ -0.98
LIMS1-210ENST00000449684 LINC00483Q53H64 154 aa8.94□□□□□ -0.98
LIMS1-210ENST00000449684 LITAFQ99732 161 aa8.94□□□□□ -0.98
LIMS1-210ENST00000449684 Q9BRP9 147 aa8.94□□□□□ -0.98
LIMS1-210ENST00000449684 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
LIMS1-210ENST00000449684 LINC00518Q8N0U6 118 aa8.92□□□□□ -0.98
LIMS1-210ENST00000449684 COPS9Q8WXC6 57 aa8.92□□□□□ -0.98
LIMS1-210ENST00000449684 MOBPQ13875 183 aa8.91□□□□□ -0.98
LIMS1-210ENST00000449684 ATOH7Q8N100 152 aa8.91□□□□□ -0.98
LIMS1-210ENST00000449684 SPANXDQ9BXN6 97 aa8.91□□□□□ -0.98
LIMS1-210ENST00000449684 CDIP1Q9H305 208 aa8.91□□□□□ -0.98
LIMS1-210ENST00000449684 SPINK1P00995 79 aa8.9□□□□□ -0.98
LIMS1-210ENST00000449684 SSBP3-AS1Q7Z2R9 100 aa8.9□□□□□ -0.98
LIMS1-210ENST00000449684 S100A2P29034 98 aa8.89□□□□□ -0.99
LIMS1-210ENST00000449684 C9orf153Q5TBE3 101 aa8.89□□□□□ -0.99
LIMS1-210ENST00000449684 ANKRD39Q53RE8 183 aa8.88□□□□□ -0.99
LIMS1-210ENST00000449684 S100A1P23297 94 aa8.87□□□□□ -0.99
LIMS1-210ENST00000449684 TPRXLQ17RH7 258 aa8.87□□□□□ -0.99
LIMS1-210ENST00000449684 DHRS4-AS1Q9P1J3 65 aa8.87□□□□□ -0.99
LIMS1-210ENST00000449684 C5orf52A6NGY3 159 aa8.86□□□□□ -0.99
LIMS1-210ENST00000449684 IFITM1P13164 125 aa8.86□□□□□ -0.99
LIMS1-210ENST00000449684 ST20-AS1Q8NBB2 130 aa8.86□□□□□ -0.99
LIMS1-210ENST00000449684 S100A6P06703 90 aa8.85□□□□□ -0.99
LIMS1-210ENST00000449684 COX7BP24311 80 aa8.85□□□□□ -0.99
LIMS1-210ENST00000449684 SNRPEP62304 92 aaKnown RBP8.85□□□□□ -0.99
LIMS1-210ENST00000449684 SLC25A34Q6PIV7 304 aa8.85□□□□□ -0.99
LIMS1-210ENST00000449684 Q6ZVH6 145 aa8.85□□□□□ -0.99
LIMS1-210ENST00000449684 FP248Q71RG6 208 aaPredicted RBP8.85□□□□□ -0.99
LIMS1-210ENST00000449684 A6NDN8 102 aa8.84□□□□□ -0.99
LIMS1-210ENST00000449684 C6orf99Q4VX62 202 aa8.84□□□□□ -0.99
LIMS1-210ENST00000449684 HSBP1L1C9JCN9 74 aa8.83□□□□□ -1
LIMS1-210ENST00000449684 PCP2Q8IVA1 136 aa8.83□□□□□ -1
LIMS1-210ENST00000449684 A0A0U1RQV1 116 aa8.82□□□□□ -1
LIMS1-210ENST00000449684 MUSTN1Q8IVN3 82 aa8.82□□□□□ -1
LIMS1-210ENST00000449684 HIST3H2BBQ8N257 126 aa8.82□□□□□ -1
LIMS1-210ENST00000449684 ELOF1P60002 83 aaKnown RBP8.81□□□□□ -1
LIMS1-210ENST00000449684 TAL2Q16559 108 aa8.81□□□□□ -1
LIMS1-210ENST00000449684 MUC2Q02817 5179 aa8.81□□□□□ -1
LIMS1-210ENST00000449684 RPS29P62273 56 aaKnown RBP8.8□□□□□ -1
LIMS1-210ENST00000449684 HIST1H2BLQ99880 126 aa8.8□□□□□ -1
LIMS1-210ENST00000449684 LAMTOR3Q9UHA4 124 aa8.8□□□□□ -1
LIMS1-210ENST00000449684 SLC25A20O43772 301 aa8.79□□□□□ -1
LIMS1-210ENST00000449684 DEFB105AQ8NG35 78 aa8.79□□□□□ -1
LIMS1-210ENST00000449684 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
LIMS1-210ENST00000449684 TRBV7-6A0A0J9YX20 115 aa8.77□□□□□ -1.01
LIMS1-210ENST00000449684 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
LIMS1-210ENST00000449684 Q8N377 158 aa8.77□□□□□ -1.01
LIMS1-210ENST00000449684 SPRR1BP22528 89 aa8.76□□□□□ -1.01
LIMS1-210ENST00000449684 TEX49A0A1B0GTD5 131 aa8.74□□□□□ -1.01
LIMS1-210ENST00000449684 SCGB1D1O95968 90 aa8.74□□□□□ -1.01
LIMS1-210ENST00000449684 Q1RN00 199 aa8.74□□□□□ -1.01
LIMS1-210ENST00000449684 HRCT1Q6UXD1 115 aa8.74□□□□□ -1.01
LIMS1-210ENST00000449684 A4D1N5 150 aa8.73□□□□□ -1.01
LIMS1-210ENST00000449684 LIMD2Q9BT23 127 aa8.73□□□□□ -1.01
LIMS1-210ENST00000449684 NHP2Q9NX24 153 aaKnown RBP8.73□□□□□ -1.01
LIMS1-210ENST00000449684 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
LIMS1-210ENST00000449684 VAMP3Q15836 100 aa8.71□□□□□ -1.02
LIMS1-210ENST00000449684 SMIM11BQ8TCY0 68 aa8.71□□□□□ -1.02
LIMS1-210ENST00000449684 PRO1933Q9H354 126 aa8.7□□□□□ -1.02
LIMS1-210ENST00000449684 MUC17Q685J3 4493 aa8.68□□□□□ -1.02
LIMS1-210ENST00000449684 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
LIMS1-210ENST00000449684 H7C2G1 150 aa8.66□□□□□ -1.02
LIMS1-210ENST00000449684 IGLV5-48A0A075B6I7 105 aa8.65□□□□□ -1.02
LIMS1-210ENST00000449684 SEC61BP60468 96 aaKnown RBP8.64□□□□□ -1.03
LIMS1-210ENST00000449684 CD164Q04900 197 aa8.64□□□□□ -1.03
LIMS1-210ENST00000449684 SMIM29Q86T20 159 aa8.64□□□□□ -1.03
LIMS1-210ENST00000449684 F8WEM9 126 aa8.63□□□□□ -1.03
LIMS1-210ENST00000449684 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
LIMS1-210ENST00000449684 COX8AP10176 69 aa8.62□□□□□ -1.03
LIMS1-210ENST00000449684 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
LIMS1-210ENST00000449684 C12orf57Q99622 126 aa8.62□□□□□ -1.03
LIMS1-210ENST00000449684 hADV29S1A0JD25 119 aa8.61□□□□□ -1.03
LIMS1-210ENST00000449684 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
LIMS1-210ENST00000449684 BVES-AS1Q5T3Y7 98 aa8.58□□□□□ -1.04
LIMS1-210ENST00000449684 Q6ZQY7 126 aa8.58□□□□□ -1.04
LIMS1-210ENST00000449684 C14orf144Q96I85 54 aa8.58□□□□□ -1.04
LIMS1-210ENST00000449684 PAM16Q9Y3D7 125 aa8.58□□□□□ -1.04
LIMS1-210ENST00000449684 FAT4Q6V0I7 4981 aa8.57□□□□□ -1.04
LIMS1-210ENST00000449684 A0A0G2JQZ4 141 aa8.57□□□□□ -1.04
LIMS1-210ENST00000449684 DLEU1O43261 78 aa8.57□□□□□ -1.04
LIMS1-210ENST00000449684 SPATA45Q537H7 98 aa8.57□□□□□ -1.04
LIMS1-210ENST00000449684 XP32Q5T750 250 aa8.57□□□□□ -1.04
LIMS1-210ENST00000449684 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
LIMS1-210ENST00000449684 RAB37Q96AX2 223 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms