RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ZNF625Q96I27 306 aaPredicted RBP6.55□□□□□ -1.36
CCDC171-203ENST00000449575 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
CCDC171-203ENST00000449575 A0A1B0GUV1 79 aa6.55□□□□□ -1.36
CCDC171-203ENST00000449575 VPREB1P12018 145 aa6.55□□□□□ -1.36
CCDC171-203ENST00000449575 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
CCDC171-203ENST00000449575 IGKV3OR2-268A0A0C4DH90 116 aa6.54□□□□□ -1.36
CCDC171-203ENST00000449575 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
CCDC171-203ENST00000449575 EPM2AB3EWF7 344 aa6.54□□□□□ -1.36
CCDC171-203ENST00000449575 CCKP06307 115 aa6.54□□□□□ -1.36
CCDC171-203ENST00000449575 IGLV10-54A0A075B6I4 117 aa6.54□□□□□ -1.36
CCDC171-203ENST00000449575 LINC00242Q5T6M2 205 aa6.54□□□□□ -1.36
CCDC171-203ENST00000449575 PRR34Q9NV39 138 aa6.54□□□□□ -1.36
CCDC171-203ENST00000449575 REG3AQ06141 175 aa6.53□□□□□ -1.36
CCDC171-203ENST00000449575 JMJD7-PLA2G4BH0Y9G9 81 aa6.53□□□□□ -1.36
CCDC171-203ENST00000449575 COX6A2Q02221 97 aa6.53□□□□□ -1.36
CCDC171-203ENST00000449575 A0A087WYN8 130 aa6.52□□□□□ -1.37
CCDC171-203ENST00000449575 FUSP35637 526 aaKnown RBP eCLIP6.52□□□□□ -1.37
CCDC171-203ENST00000449575 CDC42SE2Q9NRR3 84 aa6.52□□□□□ -1.37
CCDC171-203ENST00000449575 IGKV2D-24A0A075B6R9 120 aa6.52□□□□□ -1.37
CCDC171-203ENST00000449575 XCL1P47992 114 aa6.52□□□□□ -1.37
CCDC171-203ENST00000449575 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
CCDC171-203ENST00000449575 ORMDL1Q9P0S3 153 aa6.52□□□□□ -1.37
CCDC171-203ENST00000449575 SMIM26A0A096LP01 95 aa6.51□□□□□ -1.37
CCDC171-203ENST00000449575 SMIM11BQ8TCY0 68 aa6.51□□□□□ -1.37
CCDC171-203ENST00000449575 DNAH5Q8TE73 4624 aa6.51□□□□□ -1.37
CCDC171-203ENST00000449575 LECT2O14960 151 aa6.51□□□□□ -1.37
CCDC171-203ENST00000449575 KRTAP26-1Q6PEX3 210 aa6.51□□□□□ -1.37
CCDC171-203ENST00000449575 C20orf197Q8N268 126 aa6.51□□□□□ -1.37
CCDC171-203ENST00000449575 LINC00337Q8N6G1 96 aa6.5□□□□□ -1.37
CCDC171-203ENST00000449575 TRAV7A0A075B6U4 112 aa6.5□□□□□ -1.37
CCDC171-203ENST00000449575 NCR3O14931 201 aa6.5□□□□□ -1.37
CCDC171-203ENST00000449575 TRAV23DV6A0A075B6W5 121 aa6.49□□□□□ -1.37
CCDC171-203ENST00000449575 LRCOL1A6NCL2 159 aa6.49□□□□□ -1.37
CCDC171-203ENST00000449575 C9orf129Q5T035 196 aaKnown RBP6.49□□□□□ -1.37
CCDC171-203ENST00000449575 UBL5Q9BZL1 73 aa6.49□□□□□ -1.37
CCDC171-203ENST00000449575 A0A1B0GVY2 172 aa6.49□□□□□ -1.37
CCDC171-203ENST00000449575 PSCAO43653 123 aa6.49□□□□□ -1.37
CCDC171-203ENST00000449575 IGKV2-28A0A075B6P5 120 aa6.48□□□□□ -1.37
CCDC171-203ENST00000449575 IGKV2D-28P01615 120 aa6.48□□□□□ -1.37
CCDC171-203ENST00000449575 CD164Q04900 197 aa6.48□□□□□ -1.37
CCDC171-203ENST00000449575 MIR7-3HGQ8N6C7 128 aa6.48□□□□□ -1.37
CCDC171-203ENST00000449575 LINC00959A0A1B0GUT2 108 aa6.48□□□□□ -1.37
CCDC171-203ENST00000449575 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
CCDC171-203ENST00000449575 A0A087WTM6 91 aa6.47□□□□□ -1.37
CCDC171-203ENST00000449575 H7BZZ5 65 aa6.47□□□□□ -1.37
CCDC171-203ENST00000449575 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
CCDC171-203ENST00000449575 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
CCDC171-203ENST00000449575 NDUFC1O43677 76 aa6.47□□□□□ -1.37
CCDC171-203ENST00000449575 CHCHD10Q8WYQ3 142 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-203ENST00000449575 TMEM256-PLSCR3K7ERE1 68 aa6.46□□□□□ -1.37
CCDC171-203ENST00000449575 PRR26Q8N8Z3 221 aa6.46□□□□□ -1.37
CCDC171-203ENST00000449575 COX7B2Q8TF08 81 aa6.46□□□□□ -1.37
CCDC171-203ENST00000449575 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.38
CCDC171-203ENST00000449575 LINC00158P58513 81 aa6.46□□□□□ -1.38
CCDC171-203ENST00000449575 LINC00167Q96N53 147 aa6.46□□□□□ -1.38
CCDC171-203ENST00000449575 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
CCDC171-203ENST00000449575 RMI2Q96E14 147 aa6.45□□□□□ -1.38
CCDC171-203ENST00000449575 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
CCDC171-203ENST00000449575 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-203ENST00000449575 SS18Q15532 418 aa6.43□□□□□ -1.38
CCDC171-203ENST00000449575 SLPIP03973 132 aa6.43□□□□□ -1.38
CCDC171-203ENST00000449575 Q8N814 137 aa6.43□□□□□ -1.38
CCDC171-203ENST00000449575 C15orf56Q8N910 161 aa6.42□□□□□ -1.38
CCDC171-203ENST00000449575 IGHV3OR16-9A0A0B4J2B5 98 aa6.41□□□□□ -1.38
CCDC171-203ENST00000449575 A0A0U1RQV1 116 aa6.41□□□□□ -1.38
CCDC171-203ENST00000449575 HIGD2BQ4VC39 106 aa6.41□□□□□ -1.38
CCDC171-203ENST00000449575 FP248Q71RG6 208 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-203ENST00000449575 TOMM7Q9P0U1 55 aa6.41□□□□□ -1.38
CCDC171-203ENST00000449575 RBM3P98179 157 aaKnown RBP6.4□□□□□ -1.38
CCDC171-203ENST00000449575 F8WEM9 126 aa6.4□□□□□ -1.39
CCDC171-203ENST00000449575 TRBV7-6A0A0J9YX20 115 aa6.39□□□□□ -1.39
CCDC171-203ENST00000449575 KIAA1109Q2LD37 5005 aa6.39□□□□□ -1.39
CCDC171-203ENST00000449575 LOC110117498A0A087WWA1 95 aa6.38□□□□□ -1.39
CCDC171-203ENST00000449575 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
CCDC171-203ENST00000449575 PDE6GP18545 87 aa6.38□□□□□ -1.39
CCDC171-203ENST00000449575 CXCL6P80162 114 aa6.38□□□□□ -1.39
CCDC171-203ENST00000449575 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
CCDC171-203ENST00000449575 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
CCDC171-203ENST00000449575 H3BQ85 93 aa6.38□□□□□ -1.39
CCDC171-203ENST00000449575 PMAIP1Q13794 54 aa6.38□□□□□ -1.39
CCDC171-203ENST00000449575 BRK1Q8WUW1 75 aa6.37□□□□□ -1.39
CCDC171-203ENST00000449575 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
CCDC171-203ENST00000449575 C16orf90A8MZG2 172 aa6.37□□□□□ -1.39
CCDC171-203ENST00000449575 LINC01547P58512 204 aaPredicted RBP6.37□□□□□ -1.39
CCDC171-203ENST00000449575 KRTAP10-1P60331 282 aa6.36□□□□□ -1.39
CCDC171-203ENST00000449575 Q6ZQT0 140 aa6.36□□□□□ -1.39
CCDC171-203ENST00000449575 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
CCDC171-203ENST00000449575 A0A087WZ39 114 aa6.36□□□□□ -1.39
CCDC171-203ENST00000449575 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
CCDC171-203ENST00000449575 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
CCDC171-203ENST00000449575 ERC2-IT1O76042 136 aa6.35□□□□□ -1.39
CCDC171-203ENST00000449575 HAMPP81172 84 aa6.35□□□□□ -1.39
CCDC171-203ENST00000449575 C14orf177Q52M58 125 aa6.34□□□□□ -1.39
CCDC171-203ENST00000449575 Q6ZVQ6 151 aa6.34□□□□□ -1.39
CCDC171-203ENST00000449575 LAMTOR3Q9UHA4 124 aa6.34□□□□□ -1.39
CCDC171-203ENST00000449575 HSPG2P98160 4391 aa6.33□□□□□ -1.4
CCDC171-203ENST00000449575 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
CCDC171-203ENST00000449575 SPAG11BQ08648 103 aa6.33□□□□□ -1.4
CCDC171-203ENST00000449575 KIAA0087Q14695 138 aa6.33□□□□□ -1.4
CCDC171-203ENST00000449575 TRBV7-4A0A0J9YYF1 115 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms