RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 SCGB1D4Q6XE38 83 aa10.51□□□□□ -0.73
RFTN1-205ENST00000449415 PPDPFQ9H3Y8 114 aa10.51□□□□□ -0.73
RFTN1-205ENST00000449415 ZNF706Q9Y5V0 76 aaPredicted RBP10.51□□□□□ -0.73
RFTN1-205ENST00000449415 PRR4Q16378 134 aa10.5□□□□□ -0.73
RFTN1-205ENST00000449415 SPANXCQ9NY87 97 aa10.5□□□□□ -0.73
RFTN1-205ENST00000449415 UBR4Q5T4S7 5183 aa10.5□□□□□ -0.73
RFTN1-205ENST00000449415 PCP2Q8IVA1 136 aa10.49□□□□□ -0.73
RFTN1-205ENST00000449415 OR13C6PQ8NH95 151 aa10.49□□□□□ -0.73
RFTN1-205ENST00000449415 ERC2-IT1O76042 136 aa10.48□□□□□ -0.73
RFTN1-205ENST00000449415 LINC00304Q8N9R0 145 aa10.48□□□□□ -0.73
RFTN1-205ENST00000449415 LRP2P98164 4655 aa10.48□□□□□ -0.73
RFTN1-205ENST00000449415 AKR1D1P51857 326 aa10.47□□□□□ -0.73
RFTN1-205ENST00000449415 Q6ZRX8 168 aa10.47□□□□□ -0.73
RFTN1-205ENST00000449415 Q9BRP9 147 aa10.47□□□□□ -0.73
RFTN1-205ENST00000449415 ZNF73O43830 326 aaPredicted RBP10.46□□□□□ -0.73
RFTN1-205ENST00000449415 SNRPEP62304 92 aaKnown RBP10.45□□□□□ -0.74
RFTN1-205ENST00000449415 GAGE2AQ6NT46 116 aa10.45□□□□□ -0.74
RFTN1-205ENST00000449415 SPANXDQ9BXN6 97 aa10.45□□□□□ -0.74
RFTN1-205ENST00000449415 JOSD1Q15040 202 aaPredicted RBP10.42□□□□□ -0.74
RFTN1-205ENST00000449415 HINT1P49773 126 aaPredicted RBP10.41□□□□□ -0.74
RFTN1-205ENST00000449415 CBY1Q9Y3M2 126 aa10.41□□□□□ -0.74
RFTN1-205ENST00000449415 HSBP1L1C9JCN9 74 aa10.4□□□□□ -0.74
RFTN1-205ENST00000449415 LINC00483Q53H64 154 aa10.4□□□□□ -0.74
RFTN1-205ENST00000449415 MUSTN1Q8IVN3 82 aa10.4□□□□□ -0.74
RFTN1-205ENST00000449415 LINC00518Q8N0U6 118 aa10.4□□□□□ -0.74
RFTN1-205ENST00000449415 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.74
RFTN1-205ENST00000449415 IFITM1P13164 125 aa10.39□□□□□ -0.75
RFTN1-205ENST00000449415 LPAP08519 4548 aa10.39□□□□□ -0.75
RFTN1-205ENST00000449415 IGLV9-49A0A0B4J1Y8 123 aa10.38□□□□□ -0.75
RFTN1-205ENST00000449415 SCGB1D1O95968 90 aa10.38□□□□□ -0.75
RFTN1-205ENST00000449415 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
RFTN1-205ENST00000449415 Q6ZVH6 145 aa10.37□□□□□ -0.75
RFTN1-205ENST00000449415 ST20-AS1Q8NBB2 130 aa10.37□□□□□ -0.75
RFTN1-205ENST00000449415 Q8NBF4 154 aa10.37□□□□□ -0.75
RFTN1-205ENST00000449415 C5orf52A6NGY3 159 aa10.36□□□□□ -0.75
RFTN1-205ENST00000449415 A6NDN8 102 aa10.35□□□□□ -0.75
RFTN1-205ENST00000449415 MOBPQ13875 183 aa10.35□□□□□ -0.75
RFTN1-205ENST00000449415 C6orf99Q4VX62 202 aa10.35□□□□□ -0.75
RFTN1-205ENST00000449415 C4orf48Q5BLP8 95 aa10.35□□□□□ -0.75
RFTN1-205ENST00000449415 COX7BP24311 80 aa10.34□□□□□ -0.75
RFTN1-205ENST00000449415 SPAG11AQ6PDA7 123 aa10.33□□□□□ -0.76
RFTN1-205ENST00000449415 ELOF1P60002 83 aaKnown RBP10.31□□□□□ -0.76
RFTN1-205ENST00000449415 DHRS4-AS1Q9P1J3 65 aa10.31□□□□□ -0.76
RFTN1-205ENST00000449415 C9orf153Q5TBE3 101 aa10.3□□□□□ -0.76
RFTN1-205ENST00000449415 CTAG1AP78358 180 aa10.29□□□□□ -0.76
RFTN1-205ENST00000449415 SSBP3-AS1Q7Z2R9 100 aa10.28□□□□□ -0.76
RFTN1-205ENST00000449415 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
RFTN1-205ENST00000449415 IGLV7-46A0A075B6I9 117 aa10.25□□□□□ -0.77
RFTN1-205ENST00000449415 A4D1N5 150 aa10.25□□□□□ -0.77
RFTN1-205ENST00000449415 DEFB105AQ8NG35 78 aa10.25□□□□□ -0.77
RFTN1-205ENST00000449415 SMIM11BQ8TCY0 68 aa10.25□□□□□ -0.77
RFTN1-205ENST00000449415 TRBV7-6A0A0J9YX20 115 aa10.24□□□□□ -0.77
RFTN1-205ENST00000449415 A0A1B0GWB2 263 aa10.24□□□□□ -0.77
RFTN1-205ENST00000449415 SPINK1P00995 79 aa10.24□□□□□ -0.77
RFTN1-205ENST00000449415 COX8AP10176 69 aa10.24□□□□□ -0.77
RFTN1-205ENST00000449415 TAL2Q16559 108 aa10.23□□□□□ -0.77
RFTN1-205ENST00000449415 RNF213Q63HN8 5207 aa10.23□□□□□ -0.77
RFTN1-205ENST00000449415 SPRR1BP22528 89 aa10.22□□□□□ -0.77
RFTN1-205ENST00000449415 HIST1H4GQ99525 98 aa10.22□□□□□ -0.77
RFTN1-205ENST00000449415 PAM16Q9Y3D7 125 aa10.22□□□□□ -0.77
RFTN1-205ENST00000449415 C14orf144Q96I85 54 aa10.21□□□□□ -0.77
RFTN1-205ENST00000449415 C12orf57Q99622 126 aa10.21□□□□□ -0.77
RFTN1-205ENST00000449415 Q1RN00 199 aa10.2□□□□□ -0.78
RFTN1-205ENST00000449415 SPATA45Q537H7 98 aa10.2□□□□□ -0.78
RFTN1-205ENST00000449415 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
RFTN1-205ENST00000449415 LAMTOR3Q9UHA4 124 aa10.2□□□□□ -0.78
RFTN1-205ENST00000449415 VAMP8Q9BV40 100 aa10.18□□□□□ -0.78
RFTN1-205ENST00000449415 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
RFTN1-205ENST00000449415 DLEU1O43261 78 aa10.17□□□□□ -0.78
RFTN1-205ENST00000449415 TPRXLQ17RH7 258 aa10.17□□□□□ -0.78
RFTN1-205ENST00000449415 CDIP1Q9H305 208 aa10.17□□□□□ -0.78
RFTN1-205ENST00000449415 HRCT1Q6UXD1 115 aa10.16□□□□□ -0.78
RFTN1-205ENST00000449415 Q8N377 158 aa10.16□□□□□ -0.78
RFTN1-205ENST00000449415 VAMP3Q15836 100 aa10.15□□□□□ -0.78
RFTN1-205ENST00000449415 FP248Q71RG6 208 aaPredicted RBP10.15□□□□□ -0.78
RFTN1-205ENST00000449415 LINC01547P58512 204 aaPredicted RBP10.14□□□□□ -0.79
RFTN1-205ENST00000449415 RPS29P62273 56 aaKnown RBP10.14□□□□□ -0.79
RFTN1-205ENST00000449415 NHP2Q9NX24 153 aaKnown RBP10.14□□□□□ -0.79
RFTN1-205ENST00000449415 TMA7Q9Y2S6 64 aaKnown RBP10.13□□□□□ -0.79
RFTN1-205ENST00000449415 SLC25A20O43772 301 aa10.12□□□□□ -0.79
RFTN1-205ENST00000449415 SMIM29Q86T20 159 aa10.12□□□□□ -0.79
RFTN1-205ENST00000449415 IGLV5-48A0A075B6I7 105 aa10.11□□□□□ -0.79
RFTN1-205ENST00000449415 H7C2G1 150 aa10.1□□□□□ -0.79
RFTN1-205ENST00000449415 LINC00575Q6W349 94 aa10.1□□□□□ -0.79
RFTN1-205ENST00000449415 C2orf91Q6ZV80 131 aa10.1□□□□□ -0.79
RFTN1-205ENST00000449415 HIGD1BQ9P298 99 aa10.1□□□□□ -0.79
RFTN1-205ENST00000449415 PRO1933Q9H354 126 aa10.08□□□□□ -0.8
RFTN1-205ENST00000449415 A0A0G2JQZ4 141 aa10.07□□□□□ -0.8
RFTN1-205ENST00000449415 hADV29S1A0JD25 119 aa10.07□□□□□ -0.8
RFTN1-205ENST00000449415 CFC1BP0CG36 223 aa10.07□□□□□ -0.8
RFTN1-205ENST00000449415 CFC1P0CG37 223 aa10.07□□□□□ -0.8
RFTN1-205ENST00000449415 KRTAP13-3Q3SY46 172 aa10.07□□□□□ -0.8
RFTN1-205ENST00000449415 RAB37Q96AX2 223 aa10.07□□□□□ -0.8
RFTN1-205ENST00000449415 PYY3Q5JQD4 70 aa10.06□□□□□ -0.8
RFTN1-205ENST00000449415 Q6ZQY7 126 aa10.06□□□□□ -0.8
RFTN1-205ENST00000449415 LIMD2Q9BT23 127 aa10.05□□□□□ -0.8
RFTN1-205ENST00000449415 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
RFTN1-205ENST00000449415 CEND1Q8N111 149 aa10.03□□□□□ -0.8
RFTN1-205ENST00000449415 A0A0B4J2C4 111 aa10.01□□□□□ -0.81
RFTN1-205ENST00000449415 F8WEM9 126 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms