RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 SEC61BP60468 96 aaKnown RBP1.97□□□□□ -2.09
CHD9-203ENST00000447540 PRR4Q16378 134 aa1.97□□□□□ -2.09
CHD9-203ENST00000447540 FAM229BQ4G0N7 80 aa1.97□□□□□ -2.09
CHD9-203ENST00000447540 LELP1Q5T871 98 aa1.97□□□□□ -2.09
CHD9-203ENST00000447540 LYNX1P0DP58 116 aa1.97□□□□□ -2.09
CHD9-203ENST00000447540 LY6G6EA0A0G2JKS1 128 aa1.96□□□□□ -2.09
CHD9-203ENST00000447540 WFDC13Q8IUB5 93 aa1.96□□□□□ -2.09
CHD9-203ENST00000447540 U3KQA8 63 aa1.96□□□□□ -2.09
CHD9-203ENST00000447540 STAB1Q9NY15 2570 aa1.96□□□□□ -2.1
CHD9-203ENST00000447540 NOP10Q9NPE3 64 aaKnown RBP1.96□□□□□ -2.1
CHD9-203ENST00000447540 MUC3AQ02505 3323 aa1.96□□□□□ -2.1
CHD9-203ENST00000447540 FRYQ5TBA9 3013 aa1.96□□□□□ -2.1
CHD9-203ENST00000447540 ITPR3Q14573 2671 aa1.96□□□□□ -2.1
CHD9-203ENST00000447540 IGLV4-60A0A075B6I1 120 aa1.96□□□□□ -2.1
CHD9-203ENST00000447540 PLA2G2DQ9UNK4 145 aa1.96□□□□□ -2.1
CHD9-203ENST00000447540 FSHBP01225 129 aa1.96□□□□□ -2.1
CHD9-203ENST00000447540 TFF2Q03403 129 aa1.96□□□□□ -2.1
CHD9-203ENST00000447540 A6NDX4 124 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 CYSRT1A8MQ03 144 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 PRB4P10163 310 aaPredicted RBP1.95□□□□□ -2.1
CHD9-203ENST00000447540 ODF3L2Q3SX64 289 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 WFDC10BQ8IUB3 73 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 SPENQ96T58 3664 aaKnown RBP1.95□□□□□ -2.1
CHD9-203ENST00000447540 REG3GQ6UW15 175 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 MAP6D1Q9H9H5 199 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 C14orf177Q52M58 125 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 C1orf134Q5TEV5 83 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 ZFHX4Q86UP3 3567 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 C6orf48Q9UBA6 75 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 ZNF702PQ9H963 129 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 LRBAP50851 2863 aa1.95□□□□□ -2.1
CHD9-203ENST00000447540 FAM229AH3BQW9 127 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 SPART-AS1P0CW21 52 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 ARRDC1-AS1Q9H2J1 176 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 ASPMQ8IZT6 3477 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 SMG1Q96Q15 3661 aaKnown RBP1.94□□□□□ -2.1
CHD9-203ENST00000447540 LINC01356Q8N9X3 169 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 ZFHX3Q15911 3703 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 A0A096LNT2 108 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 C9orf129Q5T035 196 aaKnown RBP1.94□□□□□ -2.1
CHD9-203ENST00000447540 WDFY4Q6ZS81 3184 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 KRTAP16-1A8MUX0 517 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 Q6ZRX8 168 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 PRB3Q04118 309 aaPredicted RBP1.94□□□□□ -2.1
CHD9-203ENST00000447540 C9orf163Q8N9P6 203 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 INAFM1C9JVW0 142 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 DEFB105AQ8NG35 78 aa1.94□□□□□ -2.1
CHD9-203ENST00000447540 K7EQZ3 153 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 DEFB104AQ8WTQ1 72 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 FAM104AQ969W3 186 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 FLNAP21333 2647 aaKnown RBP1.93□□□□□ -2.1
CHD9-203ENST00000447540 HIVEP1P15822 2718 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 CHTF8P0CG12 524 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 LYNX1G3V0Z9 82 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 ROMO1P60602 79 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 DMXL1Q9Y485 3027 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 DEFB130BP0DP73 79 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 DEFB130AP0DP74 79 aa1.93□□□□□ -2.1
CHD9-203ENST00000447540 UNQ6190/PRO20217Q6UXQ8 127 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 DCHS2Q6V1P9 2916 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 A0A087WSZ3 146 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 DSCR10P59022 87 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 TNP2Q05952 138 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 LAMA5O15230 3695 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 TNRC18O15417 2968 aaPredicted RBP1.92□□□□□ -2.1
CHD9-203ENST00000447540 IGLV8-61A0A075B6I0 122 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 LINC00476Q8WZB0 136 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 H3BNG1 76 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 KLK12Q9UKR0 248 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 Q6ZR54 194 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 CAMK2N1Q7Z7J9 78 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 FREM2Q5SZK8 3169 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 NIPBLQ6KC79 2804 aaeCLIP1.92□□□□□ -2.11e-5■□□□□ 11.1
CHD9-203ENST00000447540 A0A0A0MQY5 61 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 LINC01565O15544 149 aa1.92□□□□□ -2.1
CHD9-203ENST00000447540 IGLV1-50A0A075B6I6 118 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 IGLV5-37A0A075B6J1 123 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 PRR34Q9NV39 138 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 TLX1NBP0CAT3 122 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 COX6B2Q6YFQ2 88 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 PRO3102Q9H379 93 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 ZNF292O60281 2723 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 RTL8CO15255 209 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 PROK1P58294 105 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 NBEAL2Q6ZNJ1 2754 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 MRPL34Q9BQ48 92 aaKnown RBP1.91□□□□□ -2.1
CHD9-203ENST00000447540 DNAJC9-AS1A6NH13 148 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 Q8N377 158 aa1.91□□□□□ -2.1
CHD9-203ENST00000447540 PLA2G2CQ5R387 149 aa1.9□□□□□ -2.1
CHD9-203ENST00000447540 DEFB1P60022 68 aa1.9□□□□□ -2.1
CHD9-203ENST00000447540 ST20-AS1Q8NBB2 130 aa1.9□□□□□ -2.1
CHD9-203ENST00000447540 TACC2O95359 2948 aa1.9□□□□□ -2.1
CHD9-203ENST00000447540 PRB2P02812 416 aaPredicted RBP1.9□□□□□ -2.11
CHD9-203ENST00000447540 PLAC8Q9NZF1 115 aa1.9□□□□□ -2.11
CHD9-203ENST00000447540 A0A1W2PNM2 257 aa1.9□□□□□ -2.11
CHD9-203ENST00000447540 LY6G6CO95867 125 aa1.9□□□□□ -2.11
CHD9-203ENST00000447540 Q6ZSN1 163 aa1.9□□□□□ -2.11
CHD9-203ENST00000447540 LOC400499M0QZD8 3231 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms