RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 A0A087WWC5 75 aa3.9□□□□□ -1.78
MCF2-206ENST00000446225 C7orf77A4D0Y5 90 aa3.9□□□□□ -1.78
MCF2-206ENST00000446225 C19orf71A6NCJ1 209 aa3.9□□□□□ -1.78
MCF2-206ENST00000446225 H3BVH4 76 aa3.9□□□□□ -1.78
MCF2-206ENST00000446225 NUPR1O60356 82 aa3.9□□□□□ -1.78
MCF2-206ENST00000446225 SFTA3P0C7M3 94 aa3.9□□□□□ -1.78
MCF2-206ENST00000446225 DSCR10P59022 87 aa3.9□□□□□ -1.78
MCF2-206ENST00000446225 RYR3Q15413 4870 aa3.9□□□□□ -1.78
MCF2-206ENST00000446225 IGHV1-24A0A0C4DH33 117 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 MUC21A0A140T8X8 626 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 LY6G6CO95867 125 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 WFDC2Q14508 124 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 RETNLBQ9BQ08 111 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 VPS13DQ5THJ4 4388 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 IGHV3-73A0A0B4J1V6 119 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 TRGV4A0A0C4DH28 118 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 IBA57-AS1B1ANH7 110 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 SYS1-DBNDD2H3BUS1 97 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 CFAP126Q5VTH2 177 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 SMIM7Q9BQ49 75 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 HYDINQ4G0P3 5121 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 MUC4Q99102 2169 aa3.89□□□□□ -1.79
MCF2-206ENST00000446225 CCKP06307 115 aa3.88□□□□□ -1.79
MCF2-206ENST00000446225 KRTDAPP60985 99 aa3.88□□□□□ -1.79
MCF2-206ENST00000446225 C18orf32Q8TCD1 76 aa3.88□□□□□ -1.79
MCF2-206ENST00000446225 PMCHL1Q16048 86 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 SDIM1Q6ZPB5 146 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 PRO0255Q9UI72 69 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 NACAE9PAV3 2078 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 A0A096LPF7 62 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 H3BNG1 76 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 H3BUT2 72 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 IGLV7-43P04211 117 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 RPL28P46779 137 aaKnown RBP3.87□□□□□ -1.79
MCF2-206ENST00000446225 LYZL1Q6UWQ5 148 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 SH2D6Q7Z4S9 175 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 SERP2Q8N6R1 65 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 Q8NDZ9 215 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 PRO0461Q9UI25 63 aa3.87□□□□□ -1.79
MCF2-206ENST00000446225 RBM3P98179 157 aaKnown RBP3.86□□□□□ -1.79
MCF2-206ENST00000446225 ESRGQ1W209 222 aa3.86□□□□□ -1.79
MCF2-206ENST00000446225 SPANXN1Q5VSR9 72 aa3.86□□□□□ -1.79
MCF2-206ENST00000446225 NHP2Q9NX24 153 aaKnown RBP3.86□□□□□ -1.79
MCF2-206ENST00000446225 H3BQ85 93 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 XCL1P47992 114 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 Q1T7F1 81 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 FAM74A4Q5TZK3 123 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 UBE2DNLQ8IWF7 75 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 KMT2AQ03164 3969 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 TRBV6-4A0A1B0GX49 114 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 F2Z2F3 143 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 CCL18P55774 89 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 LINC00315P59091 139 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 LYPD5Q6UWN5 251 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 ST20-AS1Q8NBB2 130 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 V9GYV3 84 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 DNAH6Q9C0G6 4158 aa3.85□□□□□ -1.79
MCF2-206ENST00000446225 MT3P25713 68 aa3.84□□□□□ -1.79
MCF2-206ENST00000446225 RHOHQ15669 191 aa3.84□□□□□ -1.79
MCF2-206ENST00000446225 C2orf91Q6ZV80 131 aa3.84□□□□□ -1.79
MCF2-206ENST00000446225 MRPL35Q9NZE8 188 aaKnown RBP3.84□□□□□ -1.79
MCF2-206ENST00000446225 IGLV2-18A0A075B6J9 118 aa3.83□□□□□ -1.8
MCF2-206ENST00000446225 M0R2N4 97 aa3.83□□□□□ -1.8
MCF2-206ENST00000446225 Q8N814 137 aa3.83□□□□□ -1.8
MCF2-206ENST00000446225 hDV103S1A0JD37 113 aa3.83□□□□□ -1.8
MCF2-206ENST00000446225 ELOBQ15370 118 aa3.83□□□□□ -1.8
MCF2-206ENST00000446225 ZNF56Q15929 161 aa3.83□□□□□ -1.8
MCF2-206ENST00000446225 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
MCF2-206ENST00000446225 CNFNQ9BYD5 112 aa3.83□□□□□ -1.8
MCF2-206ENST00000446225 HIGD1CA8MV81 97 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 MGPP08493 103 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 S100A7L2Q5SY68 101 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 C1orf64Q8NEQ6 169 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 NXT2Q9NPJ8 142 aaKnown RBP3.82□□□□□ -1.8
MCF2-206ENST00000446225 DNAH10Q8IVF4 4471 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 IGKV2D-26A0A0A0MRZ7 120 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 LOC107984156A0A0G2JMH3 177 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 A0A1B0GUT8 65 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 SMIM27A0A1W2PRY6 76 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 M0QY20 66 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 ROMO1P60602 79 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 LINC00483Q53H64 154 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 ARL17AQ8IVW1 177 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 LINC00269Q8N2A0 174 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 LINC01600Q96MT4 127 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 LINC00474Q9P2X8 69 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 NDUFA12Q9UI09 145 aa3.82□□□□□ -1.8
MCF2-206ENST00000446225 TRBV10-1A0A0K0K1A3 114 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 NBDYA0A0U1RRE5 68 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 C16orf90A8MZG2 172 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 NDUFC1O43677 76 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 FXYD2P54710 66 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 FAM229BQ4G0N7 80 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 TMEM136Q6ZRR5 245 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 WFDC10BQ8IUB3 73 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 FAM19A2Q8N3H0 131 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 TMEM141Q96I45 108 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 DNAH2Q9P225 4427 aa3.81□□□□□ -1.8
MCF2-206ENST00000446225 TRBV7-3A0A075B6L6 115 aa3.8□□□□□ -1.8
MCF2-206ENST00000446225 UBE2D3P61077 147 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms