RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
LINC00642-203ENST00000444942 ZNF561-AS1K7EIQ3 104 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 M0QXV9 152 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 LST1O00453 97 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 NDUFC2O95298 119 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 IGKV2D-28P01615 120 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 SMCPP49901 116 aaPredicted RBP5.93□□□□□ -1.46
LINC00642-203ENST00000444942 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
LINC00642-203ENST00000444942 UNQ6190/PRO20217Q6UXQ8 127 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 C9orf163Q8N9P6 203 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 CLEC2BQ92478 149 aa5.93□□□□□ -1.46
LINC00642-203ENST00000444942 CHTF8P0CG12 524 aa5.92□□□□□ -1.46
LINC00642-203ENST00000444942 RPL28P46779 137 aaKnown RBP5.92□□□□□ -1.46
LINC00642-203ENST00000444942 OR13C6PQ8NH95 151 aa5.92□□□□□ -1.46
LINC00642-203ENST00000444942 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
LINC00642-203ENST00000444942 TRBV10-2A0A0K0K1G8 114 aa5.91□□□□□ -1.46
LINC00642-203ENST00000444942 F8WDY8 70 aa5.91□□□□□ -1.46
LINC00642-203ENST00000444942 PANO1I0J062 215 aa5.91□□□□□ -1.46
LINC00642-203ENST00000444942 CNBPP62633 177 aaKnown RBP5.91□□□□□ -1.46
LINC00642-203ENST00000444942 C9orf116Q5BN46 136 aaPredicted RBP5.91□□□□□ -1.46
LINC00642-203ENST00000444942 C10orf25Q5T742 122 aa5.91□□□□□ -1.46
LINC00642-203ENST00000444942 SCXQ7RTU7 201 aa5.91□□□□□ -1.46
LINC00642-203ENST00000444942 TEN1Q86WV5 123 aa5.91□□□□□ -1.46
LINC00642-203ENST00000444942 ANKRD29Q8N6D5 301 aa5.91□□□□□ -1.46
LINC00642-203ENST00000444942 CAMK2N2Q96S95 79 aa5.91□□□□□ -1.46
LINC00642-203ENST00000444942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
LINC00642-203ENST00000444942 IGKV2-24A0A0C4DH68 120 aa5.9□□□□□ -1.47
LINC00642-203ENST00000444942 H3BT86 120 aa5.9□□□□□ -1.47
LINC00642-203ENST00000444942 SDIM1Q6ZPB5 146 aa5.9□□□□□ -1.47
LINC00642-203ENST00000444942 Q6ZSA8 131 aa5.9□□□□□ -1.47
LINC00642-203ENST00000444942 C2orf48Q96LS8 159 aa5.9□□□□□ -1.47
LINC00642-203ENST00000444942 CARD19Q96LW7 228 aa5.9□□□□□ -1.47
LINC00642-203ENST00000444942 VPS25Q9BRG1 176 aa5.9□□□□□ -1.47
LINC00642-203ENST00000444942 C6orf48Q9UBA6 75 aa5.9□□□□□ -1.47
LINC00642-203ENST00000444942 A0A0U1RQV1 116 aa5.89□□□□□ -1.47
LINC00642-203ENST00000444942 TRACP01848 142 aa5.89□□□□□ -1.47
LINC00642-203ENST00000444942 SYCNQ0VAF6 134 aa5.89□□□□□ -1.47
LINC00642-203ENST00000444942 Q6ZRU5 148 aa5.89□□□□□ -1.47
LINC00642-203ENST00000444942 CIRBP-AS1Q8TBR5 109 aa5.89□□□□□ -1.47
LINC00642-203ENST00000444942 SMIM11BQ8TCY0 68 aa5.89□□□□□ -1.47
LINC00642-203ENST00000444942 PPDPFLQ8WWR9 84 aa5.89□□□□□ -1.47
LINC00642-203ENST00000444942 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
LINC00642-203ENST00000444942 LPAP08519 4548 aa5.88□□□□□ -1.47
LINC00642-203ENST00000444942 H0YGX0 51 aa5.88□□□□□ -1.47
LINC00642-203ENST00000444942 NCR3O14931 201 aa5.87□□□□□ -1.47
LINC00642-203ENST00000444942 GAGE2BQ13066 116 aa5.87□□□□□ -1.47
LINC00642-203ENST00000444942 TMEM126AQ9H061 195 aa5.87□□□□□ -1.47
LINC00642-203ENST00000444942 CBY1Q9Y3M2 126 aa5.87□□□□□ -1.47
LINC00642-203ENST00000444942 A0A096LNI7 61 aa5.86□□□□□ -1.47
LINC00642-203ENST00000444942 LOC100996750A0A140TA64 210 aa5.86□□□□□ -1.47
LINC00642-203ENST00000444942 S100A7L2Q5SY68 101 aa5.86□□□□□ -1.47
LINC00642-203ENST00000444942 KRTAP4-6Q9BYQ5 205 aa5.86□□□□□ -1.47
LINC00642-203ENST00000444942 DNAL4O96015 105 aa5.85□□□□□ -1.47
LINC00642-203ENST00000444942 RPL18AQ02543 176 aaKnown RBP5.85□□□□□ -1.47
LINC00642-203ENST00000444942 A0A087WYN8 130 aa5.84□□□□□ -1.47
LINC00642-203ENST00000444942 PRR3P79522 188 aaKnown RBP5.84□□□□□ -1.47
LINC00642-203ENST00000444942 SPACA4Q8TDM5 124 aa5.84□□□□□ -1.47
LINC00642-203ENST00000444942 FAM218AQ96MZ4 157 aa5.84□□□□□ -1.47
LINC00642-203ENST00000444942 LOC107984640A0A0U1RRK4 108 aa5.83□□□□□ -1.48
LINC00642-203ENST00000444942 NDUFC2-KCTD14E9PQ53 114 aa5.83□□□□□ -1.48
LINC00642-203ENST00000444942 XAGE1AQ9HD64 81 aa5.83□□□□□ -1.48
LINC00642-203ENST00000444942 Q8NDZ9 215 aa5.82□□□□□ -1.48
LINC00642-203ENST00000444942 A0A1B0GX51 115 aa5.81□□□□□ -1.48
LINC00642-203ENST00000444942 SNCGO76070 127 aa5.81□□□□□ -1.48
LINC00642-203ENST00000444942 BAALC-AS2P0C853 105 aa5.81□□□□□ -1.48
LINC00642-203ENST00000444942 GAGE2EQ4V326 116 aa5.81□□□□□ -1.48
LINC00642-203ENST00000444942 GAGE2DQ9UEU5 116 aa5.81□□□□□ -1.48
LINC00642-203ENST00000444942 IGLV6-57P01721 117 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 VPREB1P12018 145 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 RPL37AP61513 92 aaKnown RBP5.8□□□□□ -1.48
LINC00642-203ENST00000444942 TRAV23DV6A0A075B6W5 121 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 TEX49A0A1B0GTD5 131 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 M0R378 163 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 C6orf99Q4VX62 202 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 PKIGQ9Y2B9 76 aa5.8□□□□□ -1.48
LINC00642-203ENST00000444942 TRBV10-3A0A0K0K1G6 114 aa5.79□□□□□ -1.48
LINC00642-203ENST00000444942 A0A1W2PNN7 141 aa5.79□□□□□ -1.48
LINC00642-203ENST00000444942 Q6ZRP5 223 aa5.79□□□□□ -1.48
LINC00642-203ENST00000444942 DIRC1Q969H9 104 aa5.79□□□□□ -1.48
LINC00642-203ENST00000444942 ORMDL1Q9P0S3 153 aa5.79□□□□□ -1.48
LINC00642-203ENST00000444942 LINC00474Q9P2X8 69 aa5.79□□□□□ -1.48
LINC00642-203ENST00000444942 FAM168BA1KXE4 195 aa5.78□□□□□ -1.48
LINC00642-203ENST00000444942 FAM19A5Q7Z5A7 132 aaPredicted RBP5.78□□□□□ -1.48
LINC00642-203ENST00000444942 LINC00167Q96N53 147 aa5.78□□□□□ -1.48
LINC00642-203ENST00000444942 NKAPP1Q8N9T2 125 aa5.77□□□□□ -1.49
LINC00642-203ENST00000444942 C7orf33Q8WU49 177 aa5.77□□□□□ -1.49
LINC00642-203ENST00000444942 C9orf129Q5T035 196 aaKnown RBP5.76□□□□□ -1.49
LINC00642-203ENST00000444942 LINC00575Q6W349 94 aa5.76□□□□□ -1.49
LINC00642-203ENST00000444942 PHF5AQ7RTV0 110 aaKnown RBP5.76□□□□□ -1.49
LINC00642-203ENST00000444942 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
LINC00642-203ENST00000444942 TRBV7-6A0A0J9YX20 115 aa5.75□□□□□ -1.49
LINC00642-203ENST00000444942 FAM240AA0A1B0GVK7 77 aa5.75□□□□□ -1.49
LINC00642-203ENST00000444942 hADV29S1A0JD25 119 aa5.75□□□□□ -1.49
LINC00642-203ENST00000444942 ZNF73O43830 326 aaPredicted RBP5.75□□□□□ -1.49
LINC00642-203ENST00000444942 COX7BP24311 80 aa5.75□□□□□ -1.49
LINC00642-203ENST00000444942 CDIP1Q9H305 208 aa5.75□□□□□ -1.49
LINC00642-203ENST00000444942 C22orf24Q9Y442 160 aa5.74□□□□□ -1.49
LINC00642-203ENST00000444942 IGLV5-37A0A075B6J1 123 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms