RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 LINC00337Q8N6G1 96 aa8.58□□□□□ -1.04
SSBP3-208ENST00000444533 TRAV13-2A0A0B4J235 113 aa8.57□□□□□ -1.04
SSBP3-208ENST00000444533 A6NDN8 102 aa8.57□□□□□ -1.04
SSBP3-208ENST00000444533 PRLHP81277 87 aa8.57□□□□□ -1.04
SSBP3-208ENST00000444533 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
SSBP3-208ENST00000444533 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
SSBP3-208ENST00000444533 ZNF73O43830 326 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-208ENST00000444533 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
SSBP3-208ENST00000444533 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
SSBP3-208ENST00000444533 SPRR1AP35321 89 aa8.54□□□□□ -1.04
SSBP3-208ENST00000444533 LINC01600Q96MT4 127 aa8.54□□□□□ -1.04
SSBP3-208ENST00000444533 KRTAP13-1Q8IUC0 172 aa8.53□□□□□ -1.04
SSBP3-208ENST00000444533 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
SSBP3-208ENST00000444533 A4D1N5 150 aa8.51□□□□□ -1.05
SSBP3-208ENST00000444533 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
SSBP3-208ENST00000444533 TMEM238LA0A1B0GVL6 79 aa8.5□□□□□ -1.05
SSBP3-208ENST00000444533 A6NJY4 79 aa8.5□□□□□ -1.05
SSBP3-208ENST00000444533 B5MCH6 92 aa8.5□□□□□ -1.05
SSBP3-208ENST00000444533 TAL2Q16559 108 aa8.5□□□□□ -1.05
SSBP3-208ENST00000444533 Q6ZRX8 168 aa8.5□□□□□ -1.05
SSBP3-208ENST00000444533 UQCR10Q9UDW1 63 aa8.5□□□□□ -1.05
SSBP3-208ENST00000444533 KRTAP4-16G5E9R7 235 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-208ENST00000444533 SMIM6P0DI80 62 aa8.48□□□□□ -1.05
SSBP3-208ENST00000444533 VAMP3Q15836 100 aa8.48□□□□□ -1.05
SSBP3-208ENST00000444533 CRYGAP11844 174 aa8.47□□□□□ -1.05
SSBP3-208ENST00000444533 COX7BP24311 80 aa8.47□□□□□ -1.05
SSBP3-208ENST00000444533 C6orf99Q4VX62 202 aa8.47□□□□□ -1.05
SSBP3-208ENST00000444533 SMCR5Q8TEV8 140 aa8.47□□□□□ -1.05
SSBP3-208ENST00000444533 RAB37Q96AX2 223 aa8.47□□□□□ -1.05
SSBP3-208ENST00000444533 DHRS4-AS1Q9P1J3 65 aa8.47□□□□□ -1.05
SSBP3-208ENST00000444533 DMBT1Q9UGM3 2413 aaPredicted RBP8.46□□□□□ -1.05
SSBP3-208ENST00000444533 C2orf91Q6ZV80 131 aa8.46□□□□□ -1.06
SSBP3-208ENST00000444533 CEND1Q8N111 149 aa8.46□□□□□ -1.06
SSBP3-208ENST00000444533 MYCBP2O75592 4640 aa8.46□□□□□ -1.06
SSBP3-208ENST00000444533 TRBV7-6A0A0J9YX20 115 aa8.45□□□□□ -1.06
SSBP3-208ENST00000444533 A0A1B0GWB2 263 aa8.45□□□□□ -1.06
SSBP3-208ENST00000444533 FAM229BQ4G0N7 80 aa8.45□□□□□ -1.06
SSBP3-208ENST00000444533 PRR26Q8N8Z3 221 aa8.45□□□□□ -1.06
SSBP3-208ENST00000444533 C12orf57Q99622 126 aa8.45□□□□□ -1.06
SSBP3-208ENST00000444533 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
SSBP3-208ENST00000444533 SMCPP49901 116 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-208ENST00000444533 HSD52Q0P140 79 aa8.44□□□□□ -1.06
SSBP3-208ENST00000444533 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
SSBP3-208ENST00000444533 SLC25A20O43772 301 aa8.43□□□□□ -1.06
SSBP3-208ENST00000444533 ELOF1P60002 83 aaKnown RBP8.43□□□□□ -1.06
SSBP3-208ENST00000444533 SMIM11BQ8TCY0 68 aa8.43□□□□□ -1.06
SSBP3-208ENST00000444533 NHP2Q9NX24 153 aaKnown RBP8.43□□□□□ -1.06
SSBP3-208ENST00000444533 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
SSBP3-208ENST00000444533 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
SSBP3-208ENST00000444533 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
SSBP3-208ENST00000444533 Q9BRP9 147 aa8.42□□□□□ -1.06
SSBP3-208ENST00000444533 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
SSBP3-208ENST00000444533 MT1HL1P0DM35 61 aa8.41□□□□□ -1.06
SSBP3-208ENST00000444533 KRTAP10-8P60410 259 aa8.41□□□□□ -1.06
SSBP3-208ENST00000444533 Q1RN00 199 aa8.41□□□□□ -1.06
SSBP3-208ENST00000444533 H7C2G1 150 aa8.4□□□□□ -1.06
SSBP3-208ENST00000444533 SNCGO76070 127 aa8.4□□□□□ -1.06
SSBP3-208ENST00000444533 CFC1BP0CG36 223 aa8.4□□□□□ -1.06
SSBP3-208ENST00000444533 CFC1P0CG37 223 aa8.4□□□□□ -1.06
SSBP3-208ENST00000444533 BVES-AS1Q5T3Y7 98 aa8.4□□□□□ -1.06
SSBP3-208ENST00000444533 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
SSBP3-208ENST00000444533 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
SSBP3-208ENST00000444533 TSTD3H0UI37 97 aa8.38□□□□□ -1.07
SSBP3-208ENST00000444533 PRO1933Q9H354 126 aa8.38□□□□□ -1.07
SSBP3-208ENST00000444533 PRO1854Q9UHT4 67 aa8.38□□□□□ -1.07
SSBP3-208ENST00000444533 A0A087X002 238 aa8.37□□□□□ -1.07
SSBP3-208ENST00000444533 LOC105371267A0A1B0GV96 52 aa8.37□□□□□ -1.07
SSBP3-208ENST00000444533 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
SSBP3-208ENST00000444533 LRP1Q07954 4544 aaKnown RBP8.37□□□□□ -1.07
SSBP3-208ENST00000444533 FXYD2P54710 66 aa8.36□□□□□ -1.07
SSBP3-208ENST00000444533 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
SSBP3-208ENST00000444533 M0R143 59 aa8.34□□□□□ -1.07
SSBP3-208ENST00000444533 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.08
SSBP3-208ENST00000444533 hADV29S1A0JD25 119 aa8.33□□□□□ -1.08
SSBP3-208ENST00000444533 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
SSBP3-208ENST00000444533 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
SSBP3-208ENST00000444533 DEFB105AQ8NG35 78 aa8.33□□□□□ -1.08
SSBP3-208ENST00000444533 LAMTOR3Q9UHA4 124 aa8.33□□□□□ -1.08
SSBP3-208ENST00000444533 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
SSBP3-208ENST00000444533 H0YGX0 51 aa8.32□□□□□ -1.08
SSBP3-208ENST00000444533 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
SSBP3-208ENST00000444533 COX6CP09669 75 aa8.31□□□□□ -1.08
SSBP3-208ENST00000444533 PSMB2P49721 201 aa8.31□□□□□ -1.08
SSBP3-208ENST00000444533 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
SSBP3-208ENST00000444533 C9orf153Q5TBE3 101 aa8.31□□□□□ -1.08
SSBP3-208ENST00000444533 LINC00575Q6W349 94 aa8.31□□□□□ -1.08
SSBP3-208ENST00000444533 C3orf22Q8N5N4 141 aa8.3□□□□□ -1.08
SSBP3-208ENST00000444533 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
SSBP3-208ENST00000444533 CTAG1AP78358 180 aa8.29□□□□□ -1.08
SSBP3-208ENST00000444533 MOBPQ13875 183 aa8.29□□□□□ -1.08
SSBP3-208ENST00000444533 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-208ENST00000444533 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
SSBP3-208ENST00000444533 GHRHP01286 108 aa8.28□□□□□ -1.08
SSBP3-208ENST00000444533 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
SSBP3-208ENST00000444533 SPRR1BP22528 89 aa8.27□□□□□ -1.09
SSBP3-208ENST00000444533 F8WEM9 126 aa8.26□□□□□ -1.09
SSBP3-208ENST00000444533 K7ERJ3 54 aa8.26□□□□□ -1.09
SSBP3-208ENST00000444533 TSPAN13O95857 204 aa8.26□□□□□ -1.09
SSBP3-208ENST00000444533 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-208ENST00000444533 Q6ZQY7 126 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms