RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 NDUFA12Q9UI09 145 aa3.95□□□□□ -1.78
RFX3-206ENST00000442560 MYMXA0A1B0GTQ4 84 aa3.94□□□□□ -1.78
RFX3-206ENST00000442560 LINC00587B1AMM8 73 aa3.94□□□□□ -1.78
RFX3-206ENST00000442560 DDTP30046 118 aa3.94□□□□□ -1.78
RFX3-206ENST00000442560 Q9BRP9 147 aa3.94□□□□□ -1.78
RFX3-206ENST00000442560 MAP1LC3CQ9BXW4 147 aa3.94□□□□□ -1.78
RFX3-206ENST00000442560 SLC25A20O43772 301 aa3.93□□□□□ -1.78
RFX3-206ENST00000442560 RPS29P62273 56 aaKnown RBP3.93□□□□□ -1.78
RFX3-206ENST00000442560 FAM19A2Q8N3H0 131 aa3.93□□□□□ -1.78
RFX3-206ENST00000442560 CHCHD1Q96BP2 118 aaKnown RBP3.93□□□□□ -1.78
RFX3-206ENST00000442560 H0Y8G0 127 aa3.92□□□□□ -1.78
RFX3-206ENST00000442560 TSPEAR-AS2P59090 65 aa3.92□□□□□ -1.78
RFX3-206ENST00000442560 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
RFX3-206ENST00000442560 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
RFX3-206ENST00000442560 LOC107984156A0A0G2JMH3 177 aa3.91□□□□□ -1.78
RFX3-206ENST00000442560 TRBV10-2A0A0K0K1G8 114 aa3.91□□□□□ -1.78
RFX3-206ENST00000442560 HSBP1O75506 76 aa3.91□□□□□ -1.78
RFX3-206ENST00000442560 APOC3P02656 99 aa3.91□□□□□ -1.78
RFX3-206ENST00000442560 S100A7L2Q5SY68 101 aa3.91□□□□□ -1.78
RFX3-206ENST00000442560 Q6ZRX8 168 aa3.91□□□□□ -1.78
RFX3-206ENST00000442560 ARL17AQ8IVW1 177 aa3.91□□□□□ -1.78
RFX3-206ENST00000442560 ST20-AS1Q8NBB2 130 aa3.91□□□□□ -1.78
RFX3-206ENST00000442560 TRAV23DV6A0A075B6W5 121 aa3.9□□□□□ -1.79
RFX3-206ENST00000442560 LEPROTO15243 131 aa3.9□□□□□ -1.79
RFX3-206ENST00000442560 NPC2P61916 151 aa3.9□□□□□ -1.79
RFX3-206ENST00000442560 MIEN1Q9BRT3 115 aa3.9□□□□□ -1.79
RFX3-206ENST00000442560 SPANXB1Q9NS25 103 aaPredicted RBP3.9□□□□□ -1.79
RFX3-206ENST00000442560 J3QQQ9 107 aa3.89□□□□□ -1.79
RFX3-206ENST00000442560 NDUFC2O95298 119 aa3.89□□□□□ -1.79
RFX3-206ENST00000442560 IGLV6-57P01721 117 aa3.89□□□□□ -1.79
RFX3-206ENST00000442560 JOSD1Q15040 202 aaPredicted RBP3.89□□□□□ -1.79
RFX3-206ENST00000442560 HRCT1Q6UXD1 115 aa3.89□□□□□ -1.79
RFX3-206ENST00000442560 IGLV8-61A0A075B6I0 122 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 ZNF73O43830 326 aaPredicted RBP3.88□□□□□ -1.79
RFX3-206ENST00000442560 LEPROTL1O95214 131 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 SNAPINO95295 136 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 LGALS3P17931 250 aaKnown RBP3.88□□□□□ -1.79
RFX3-206ENST00000442560 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 PCOTHQ58A44 107 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 SOSTDC1Q6X4U4 206 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 SVBPQ8N300 66 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 YPEL4Q96NS1 127 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 PMCHL2Q9BQD1 86 aa3.88□□□□□ -1.79
RFX3-206ENST00000442560 NMUP48645 174 aa3.87□□□□□ -1.79
RFX3-206ENST00000442560 HERVK_113P61574 105 aa3.87□□□□□ -1.79
RFX3-206ENST00000442560 MT1HP80294 61 aa3.87□□□□□ -1.79
RFX3-206ENST00000442560 NDUFA5Q16718 116 aa3.87□□□□□ -1.79
RFX3-206ENST00000442560 DPM2O94777 84 aa3.86□□□□□ -1.79
RFX3-206ENST00000442560 IGKCP01834 107 aa3.86□□□□□ -1.79
RFX3-206ENST00000442560 FABP4P15090 132 aa3.86□□□□□ -1.79
RFX3-206ENST00000442560 PLNP26678 52 aa3.86□□□□□ -1.79
RFX3-206ENST00000442560 HINT1P49773 126 aaPredicted RBP3.86□□□□□ -1.79
RFX3-206ENST00000442560 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
RFX3-206ENST00000442560 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
RFX3-206ENST00000442560 LIMD2Q9BT23 127 aa3.86□□□□□ -1.79
RFX3-206ENST00000442560 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
RFX3-206ENST00000442560 A0A0J9YXY3 114 aa3.85□□□□□ -1.79
RFX3-206ENST00000442560 SERF1AO75920 110 aa3.85□□□□□ -1.79
RFX3-206ENST00000442560 TRGC2P03986 189 aa3.85□□□□□ -1.79
RFX3-206ENST00000442560 SPRR1BP22528 89 aa3.85□□□□□ -1.79
RFX3-206ENST00000442560 OR13C6PQ8NH95 151 aa3.85□□□□□ -1.79
RFX3-206ENST00000442560 C5orf52A6NGY3 159 aa3.84□□□□□ -1.79
RFX3-206ENST00000442560 CFC1BP0CG36 223 aa3.84□□□□□ -1.79
RFX3-206ENST00000442560 LAMTOR3Q9UHA4 124 aa3.84□□□□□ -1.79
RFX3-206ENST00000442560 HSPB8Q9UJY1 196 aa3.84□□□□□ -1.79
RFX3-206ENST00000442560 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
RFX3-206ENST00000442560 TAL2Q16559 108 aa3.83□□□□□ -1.8
RFX3-206ENST00000442560 SLC25A34Q6PIV7 304 aa3.83□□□□□ -1.8
RFX3-206ENST00000442560 DEFB105AQ8NG35 78 aa3.83□□□□□ -1.8
RFX3-206ENST00000442560 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
RFX3-206ENST00000442560 CBY1Q9Y3M2 126 aa3.83□□□□□ -1.8
RFX3-206ENST00000442560 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
RFX3-206ENST00000442560 E9PLD3 99 aa3.82□□□□□ -1.8
RFX3-206ENST00000442560 H7C2G1 150 aa3.82□□□□□ -1.8
RFX3-206ENST00000442560 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
RFX3-206ENST00000442560 Q1RN00 199 aa3.82□□□□□ -1.8
RFX3-206ENST00000442560 LINC00308Q8TCZ7 52 aa3.82□□□□□ -1.8
RFX3-206ENST00000442560 PRO1933Q9H354 126 aa3.82□□□□□ -1.8
RFX3-206ENST00000442560 SPANXCQ9NY87 97 aa3.82□□□□□ -1.8
RFX3-206ENST00000442560 COX7BP24311 80 aa3.81□□□□□ -1.8
RFX3-206ENST00000442560 C6orf99Q4VX62 202 aa3.81□□□□□ -1.8
RFX3-206ENST00000442560 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
RFX3-206ENST00000442560 LITAFQ99732 161 aa3.81□□□□□ -1.8
RFX3-206ENST00000442560 A0A0G2JQZ4 141 aa3.8□□□□□ -1.8
RFX3-206ENST00000442560 M0R2T5 61 aa3.8□□□□□ -1.8
RFX3-206ENST00000442560 ELOF1P60002 83 aaKnown RBP3.8□□□□□ -1.8
RFX3-206ENST00000442560 CD164Q04900 197 aa3.8□□□□□ -1.8
RFX3-206ENST00000442560 SPANXDQ9BXN6 97 aa3.8□□□□□ -1.8
RFX3-206ENST00000442560 TEX49A0A1B0GTD5 131 aa3.79□□□□□ -1.8
RFX3-206ENST00000442560 AKR1D1P51857 326 aa3.79□□□□□ -1.8
RFX3-206ENST00000442560 RPL37P61927 97 aaKnown RBP3.79□□□□□ -1.8
RFX3-206ENST00000442560 C1orf195Q5TG92 126 aa3.79□□□□□ -1.8
RFX3-206ENST00000442560 TTTY13Q9BZ97 58 aa3.79□□□□□ -1.8
RFX3-206ENST00000442560 ZNF815PA8K554 130 aa3.78□□□□□ -1.8
RFX3-206ENST00000442560 SYS1-DBNDD2H3BUS1 97 aa3.78□□□□□ -1.8
RFX3-206ENST00000442560 TIMM17BO60830 172 aa3.78□□□□□ -1.8
RFX3-206ENST00000442560 COX6B2Q6YFQ2 88 aa3.78□□□□□ -1.8
RFX3-206ENST00000442560 SMIM29Q86T20 159 aa3.78□□□□□ -1.8
RFX3-206ENST00000442560 LINC00518Q8N0U6 118 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms