RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 TINCRA0A1B0GVN0 87 aa7.66□□□□□ -1.18
LINC00642-202ENST00000442515 M0R2T5 61 aa7.66□□□□□ -1.18
LINC00642-202ENST00000442515 COX8AP10176 69 aa7.66□□□□□ -1.18
LINC00642-202ENST00000442515 HERVK_113P61574 105 aa7.66□□□□□ -1.18
LINC00642-202ENST00000442515 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
LINC00642-202ENST00000442515 IGLV8-61A0A075B6I0 122 aa7.65□□□□□ -1.18
LINC00642-202ENST00000442515 SMIM1B2RUZ4 78 aa7.65□□□□□ -1.18
LINC00642-202ENST00000442515 DLEU1O43261 78 aa7.65□□□□□ -1.18
LINC00642-202ENST00000442515 Q8N377 158 aa7.65□□□□□ -1.18
LINC00642-202ENST00000442515 GEMIN7Q9H840 131 aaKnown RBP7.65□□□□□ -1.18
LINC00642-202ENST00000442515 IGLV5-45A0A087WSX0 123 aa7.64□□□□□ -1.19
LINC00642-202ENST00000442515 E9PLD3 99 aa7.64□□□□□ -1.19
LINC00642-202ENST00000442515 VPREB1P12018 145 aa7.64□□□□□ -1.19
LINC00642-202ENST00000442515 PCOTHQ58A44 107 aa7.64□□□□□ -1.19
LINC00642-202ENST00000442515 SLC25A34Q6PIV7 304 aa7.64□□□□□ -1.19
LINC00642-202ENST00000442515 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
LINC00642-202ENST00000442515 ZNF22P17026 224 aaPredicted RBP7.63□□□□□ -1.19
LINC00642-202ENST00000442515 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
LINC00642-202ENST00000442515 C14orf144Q96I85 54 aa7.63□□□□□ -1.19
LINC00642-202ENST00000442515 ZNF706Q9Y5V0 76 aaPredicted RBP7.63□□□□□ -1.19
LINC00642-202ENST00000442515 TMEM223A0PJW6 202 aa7.62□□□□□ -1.19
LINC00642-202ENST00000442515 NMUP48645 174 aa7.62□□□□□ -1.19
LINC00642-202ENST00000442515 RPS29P62273 56 aaKnown RBP7.62□□□□□ -1.19
LINC00642-202ENST00000442515 BOD1L2Q8IYS8 172 aa7.62□□□□□ -1.19
LINC00642-202ENST00000442515 FCGBPQ9Y6R7 5405 aaPredicted RBP7.61□□□□□ -1.19
LINC00642-202ENST00000442515 H3BRM9 83 aa7.61□□□□□ -1.19
LINC00642-202ENST00000442515 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
LINC00642-202ENST00000442515 LEPROTO15243 131 aa7.59□□□□□ -1.19
LINC00642-202ENST00000442515 SLC25A20O43772 301 aa7.59□□□□□ -1.19
LINC00642-202ENST00000442515 PCP2Q8IVA1 136 aa7.59□□□□□ -1.19
LINC00642-202ENST00000442515 Q8NDZ9 215 aa7.59□□□□□ -1.19
LINC00642-202ENST00000442515 PFN2P35080 140 aa7.58□□□□□ -1.2
LINC00642-202ENST00000442515 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
LINC00642-202ENST00000442515 J3QQQ9 107 aa7.57□□□□□ -1.2
LINC00642-202ENST00000442515 LCE2BO14633 110 aa7.57□□□□□ -1.2
LINC00642-202ENST00000442515 RPL24P83731 157 aaKnown RBP7.57□□□□□ -1.2
LINC00642-202ENST00000442515 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
LINC00642-202ENST00000442515 HIGD1BQ9P298 99 aa7.57□□□□□ -1.2
LINC00642-202ENST00000442515 SPINK8P0C7L1 97 aa7.56□□□□□ -1.2
LINC00642-202ENST00000442515 LGALS3P17931 250 aaKnown RBP7.56□□□□□ -1.2
LINC00642-202ENST00000442515 MOBPQ13875 183 aa7.56□□□□□ -1.2
LINC00642-202ENST00000442515 C2orf91Q6ZV80 131 aa7.56□□□□□ -1.2
LINC00642-202ENST00000442515 IGLV5-39A0A0G2JS06 123 aa7.55□□□□□ -1.2
LINC00642-202ENST00000442515 ZNF815PA8K554 130 aa7.55□□□□□ -1.2
LINC00642-202ENST00000442515 LINC00483Q53H64 154 aa7.55□□□□□ -1.2
LINC00642-202ENST00000442515 TSPEAR-AS2P59090 65 aa7.54□□□□□ -1.2
LINC00642-202ENST00000442515 TTTY13Q9BZ97 58 aa7.54□□□□□ -1.2
LINC00642-202ENST00000442515 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
LINC00642-202ENST00000442515 M0R143 59 aa7.53□□□□□ -1.2
LINC00642-202ENST00000442515 HSD52Q0P140 79 aa7.53□□□□□ -1.2
LINC00642-202ENST00000442515 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
LINC00642-202ENST00000442515 TAL2Q16559 108 aa7.52□□□□□ -1.21
LINC00642-202ENST00000442515 SMCR5Q8TEV8 140 aa7.52□□□□□ -1.21
LINC00642-202ENST00000442515 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
LINC00642-202ENST00000442515 GAGE2AQ6NT46 116 aa7.51□□□□□ -1.21
LINC00642-202ENST00000442515 SFTA2Q6UW10 78 aa7.51□□□□□ -1.21
LINC00642-202ENST00000442515 SCGB1D4Q6XE38 83 aa7.51□□□□□ -1.21
LINC00642-202ENST00000442515 SSBP3-AS1Q7Z2R9 100 aa7.51□□□□□ -1.21
LINC00642-202ENST00000442515 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
LINC00642-202ENST00000442515 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
LINC00642-202ENST00000442515 SNHG12Q9BXW3 62 aa7.5□□□□□ -1.21
LINC00642-202ENST00000442515 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
LINC00642-202ENST00000442515 C9orf92A6NGG3 77 aa7.49□□□□□ -1.21
LINC00642-202ENST00000442515 HERV-K104P63124 156 aa7.48□□□□□ -1.21
LINC00642-202ENST00000442515 BVES-AS1Q5T3Y7 98 aa7.48□□□□□ -1.21
LINC00642-202ENST00000442515 A0A0J9YXY3 114 aa7.47□□□□□ -1.21
LINC00642-202ENST00000442515 PRYO14603 147 aa7.47□□□□□ -1.21
LINC00642-202ENST00000442515 TIMM17BO60830 172 aa7.47□□□□□ -1.21
LINC00642-202ENST00000442515 HINT1P49773 126 aaPredicted RBP7.47□□□□□ -1.21
LINC00642-202ENST00000442515 COX17Q14061 63 aa7.47□□□□□ -1.21
LINC00642-202ENST00000442515 ZNF625Q96I27 306 aaPredicted RBP7.47□□□□□ -1.21
LINC00642-202ENST00000442515 SPRR1AP35321 89 aa7.46□□□□□ -1.22
LINC00642-202ENST00000442515 Q6ZVH6 145 aa7.46□□□□□ -1.22
LINC00642-202ENST00000442515 HIST1H4GQ99525 98 aa7.46□□□□□ -1.22
LINC00642-202ENST00000442515 ETDCA0A1B0GVM5 59 aa7.45□□□□□ -1.22
LINC00642-202ENST00000442515 KRTAP4-16G5E9R7 235 aaPredicted RBP7.45□□□□□ -1.22
LINC00642-202ENST00000442515 COL5A1-AS1Q5SY13 56 aa7.45□□□□□ -1.22
LINC00642-202ENST00000442515 CEND1Q8N111 149 aa7.45□□□□□ -1.22
LINC00642-202ENST00000442515 BATFQ16520 125 aa7.44□□□□□ -1.22
LINC00642-202ENST00000442515 LITAFQ99732 161 aa7.44□□□□□ -1.22
LINC00642-202ENST00000442515 SPANXDQ9BXN6 97 aa7.44□□□□□ -1.22
LINC00642-202ENST00000442515 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
LINC00642-202ENST00000442515 TMEM238LA0A1B0GVL6 79 aa7.43□□□□□ -1.22
LINC00642-202ENST00000442515 A6NDN8 102 aa7.43□□□□□ -1.22
LINC00642-202ENST00000442515 A6NJY4 79 aa7.43□□□□□ -1.22
LINC00642-202ENST00000442515 ERC2-IT1O76042 136 aa7.43□□□□□ -1.22
LINC00642-202ENST00000442515 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
LINC00642-202ENST00000442515 C9orf153Q5TBE3 101 aa7.42□□□□□ -1.22
LINC00642-202ENST00000442515 IFITM1P13164 125 aa7.41□□□□□ -1.22
LINC00642-202ENST00000442515 COPS9Q8WXC6 57 aa7.41□□□□□ -1.22
LINC00642-202ENST00000442515 NCR3O14931 201 aa7.4□□□□□ -1.22
LINC00642-202ENST00000442515 FXYD2P54710 66 aa7.4□□□□□ -1.22
LINC00642-202ENST00000442515 MEIG1Q5JSS6 88 aa7.4□□□□□ -1.22
LINC00642-202ENST00000442515 A0A1B0GWB2 263 aa7.39□□□□□ -1.23
LINC00642-202ENST00000442515 IGLV6-57P01721 117 aa7.39□□□□□ -1.23
LINC00642-202ENST00000442515 CFC1P0CG37 223 aa7.39□□□□□ -1.23
LINC00642-202ENST00000442515 B5MCH6 92 aa7.38□□□□□ -1.23
LINC00642-202ENST00000442515 LINC00158P58513 81 aa7.38□□□□□ -1.23
LINC00642-202ENST00000442515 ADAMTSL4-AS1Q5T5F5 129 aa7.38□□□□□ -1.23
LINC00642-202ENST00000442515 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms