RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 SNRPEP62304 92 aaKnown RBP8.29□□□□□ -1.08
PTPRN-206ENST00000442029 A0A0J9YXY3 114 aa8.28□□□□□ -1.08
PTPRN-206ENST00000442029 C5orf52A6NGY3 159 aa8.28□□□□□ -1.08
PTPRN-206ENST00000442029 E9PLD3 99 aa8.28□□□□□ -1.08
PTPRN-206ENST00000442029 KRTDAPP60985 99 aa8.28□□□□□ -1.08
PTPRN-206ENST00000442029 JOSD1Q15040 202 aaPredicted RBP8.28□□□□□ -1.08
PTPRN-206ENST00000442029 Q6ZRX8 168 aa8.28□□□□□ -1.08
PTPRN-206ENST00000442029 HIST1H2BLQ99880 126 aa8.28□□□□□ -1.08
PTPRN-206ENST00000442029 TRAV23DV6A0A075B6W5 121 aa8.27□□□□□ -1.09
PTPRN-206ENST00000442029 C20orf202A1L168 122 aa8.27□□□□□ -1.09
PTPRN-206ENST00000442029 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
PTPRN-206ENST00000442029 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
PTPRN-206ENST00000442029 MUC2Q02817 5179 aa8.26□□□□□ -1.09
PTPRN-206ENST00000442029 IGLV9-49A0A0B4J1Y8 123 aa8.26□□□□□ -1.09
PTPRN-206ENST00000442029 SPINK1P00995 79 aa8.26□□□□□ -1.09
PTPRN-206ENST00000442029 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
PTPRN-206ENST00000442029 AKR1D1P51857 326 aa8.26□□□□□ -1.09
PTPRN-206ENST00000442029 FP248Q71RG6 208 aaPredicted RBP8.26□□□□□ -1.09
PTPRN-206ENST00000442029 CBY1Q9Y3M2 126 aa8.26□□□□□ -1.09
PTPRN-206ENST00000442029 ERC2-IT1O76042 136 aa8.25□□□□□ -1.09
PTPRN-206ENST00000442029 HINT1P49773 126 aaPredicted RBP8.25□□□□□ -1.09
PTPRN-206ENST00000442029 MOBPQ13875 183 aa8.25□□□□□ -1.09
PTPRN-206ENST00000442029 Q9BRP9 147 aa8.25□□□□□ -1.09
PTPRN-206ENST00000442029 ADAMTSL4-AS1Q5T5F5 129 aa8.24□□□□□ -1.09
PTPRN-206ENST00000442029 SOSTDC1Q6X4U4 206 aa8.24□□□□□ -1.09
PTPRN-206ENST00000442029 ZNF73O43830 326 aaPredicted RBP8.23□□□□□ -1.09
PTPRN-206ENST00000442029 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
PTPRN-206ENST00000442029 TMA7Q9Y2S6 64 aaKnown RBP8.22□□□□□ -1.09
PTPRN-206ENST00000442029 C9orf153Q5TBE3 101 aa8.21□□□□□ -1.1
PTPRN-206ENST00000442029 OR13C6PQ8NH95 151 aa8.21□□□□□ -1.1
PTPRN-206ENST00000442029 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
PTPRN-206ENST00000442029 SPANXCQ9NY87 97 aa8.21□□□□□ -1.1
PTPRN-206ENST00000442029 MUC17Q685J3 4493 aa8.21□□□□□ -1.1
PTPRN-206ENST00000442029 ZNF815PA8K554 130 aa8.2□□□□□ -1.1
PTPRN-206ENST00000442029 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
PTPRN-206ENST00000442029 TIMM17BO60830 172 aa8.2□□□□□ -1.1
PTPRN-206ENST00000442029 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
PTPRN-206ENST00000442029 LITAFQ99732 161 aa8.17□□□□□ -1.1
PTPRN-206ENST00000442029 ST20-AS1Q8NBB2 130 aa8.16□□□□□ -1.1
PTPRN-206ENST00000442029 SPANXDQ9BXN6 97 aa8.16□□□□□ -1.1
PTPRN-206ENST00000442029 SLC25A20O43772 301 aa8.15□□□□□ -1.1
PTPRN-206ENST00000442029 SCGB1D1O95968 90 aa8.15□□□□□ -1.1
PTPRN-206ENST00000442029 KRTAP13-3Q3SY46 172 aa8.15□□□□□ -1.1
PTPRN-206ENST00000442029 SLC25A34Q6PIV7 304 aa8.15□□□□□ -1.1
PTPRN-206ENST00000442029 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
PTPRN-206ENST00000442029 SCGB1D4Q6XE38 83 aa8.14□□□□□ -1.11
PTPRN-206ENST00000442029 ATOH7Q8N100 152 aa8.14□□□□□ -1.11
PTPRN-206ENST00000442029 Q8N377 158 aa8.14□□□□□ -1.11
PTPRN-206ENST00000442029 TTTY13Q9BZ97 58 aa8.14□□□□□ -1.11
PTPRN-206ENST00000442029 DHRS4-AS1Q9P1J3 65 aa8.14□□□□□ -1.11
PTPRN-206ENST00000442029 HSBP1L1C9JCN9 74 aa8.13□□□□□ -1.11
PTPRN-206ENST00000442029 COPS9Q8WXC6 57 aa8.13□□□□□ -1.11
PTPRN-206ENST00000442029 FAT4Q6V0I7 4981 aa8.12□□□□□ -1.11
PTPRN-206ENST00000442029 COX7BP24311 80 aa8.12□□□□□ -1.11
PTPRN-206ENST00000442029 LAMTOR3Q9UHA4 124 aa8.11□□□□□ -1.11
PTPRN-206ENST00000442029 C6orf99Q4VX62 202 aa8.1□□□□□ -1.11
PTPRN-206ENST00000442029 ANKRD39Q53RE8 183 aa8.1□□□□□ -1.11
PTPRN-206ENST00000442029 SPRR1BP22528 89 aa8.09□□□□□ -1.11
PTPRN-206ENST00000442029 ELOF1P60002 83 aaKnown RBP8.09□□□□□ -1.11
PTPRN-206ENST00000442029 SEC61BP60468 96 aaKnown RBP8.09□□□□□ -1.11
PTPRN-206ENST00000442029 TAL2Q16559 108 aa8.08□□□□□ -1.12
PTPRN-206ENST00000442029 LIMD2Q9BT23 127 aa8.08□□□□□ -1.12
PTPRN-206ENST00000442029 IFITM1P13164 125 aa8.07□□□□□ -1.12
PTPRN-206ENST00000442029 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
PTPRN-206ENST00000442029 A6NDN8 102 aa8.06□□□□□ -1.12
PTPRN-206ENST00000442029 HRCT1Q6UXD1 115 aa8.06□□□□□ -1.12
PTPRN-206ENST00000442029 Q6ZVH6 145 aa8.06□□□□□ -1.12
PTPRN-206ENST00000442029 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
PTPRN-206ENST00000442029 TRBV7-6A0A0J9YX20 115 aa8.04□□□□□ -1.12
PTPRN-206ENST00000442029 A0A1B0GWB2 263 aa8.04□□□□□ -1.12
PTPRN-206ENST00000442029 Q1RN00 199 aa8.04□□□□□ -1.12
PTPRN-206ENST00000442029 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
PTPRN-206ENST00000442029 VAMP8Q9BV40 100 aa8.04□□□□□ -1.12
PTPRN-206ENST00000442029 TEX49A0A1B0GTD5 131 aa8.03□□□□□ -1.12
PTPRN-206ENST00000442029 PYY3Q5JQD4 70 aa8.03□□□□□ -1.12
PTPRN-206ENST00000442029 PCP2Q8IVA1 136 aa8.03□□□□□ -1.12
PTPRN-206ENST00000442029 MUSTN1Q8IVN3 82 aa8.03□□□□□ -1.12
PTPRN-206ENST00000442029 PRO1933Q9H354 126 aa8.02□□□□□ -1.13
PTPRN-206ENST00000442029 SPATA45Q537H7 98 aa8.01□□□□□ -1.13
PTPRN-206ENST00000442029 PAM16Q9Y3D7 125 aa8.01□□□□□ -1.13
PTPRN-206ENST00000442029 TRAV13-2A0A0B4J235 113 aa8□□□□□ -1.13
PTPRN-206ENST00000442029 A4D1N5 150 aa8□□□□□ -1.13
PTPRN-206ENST00000442029 XP32Q5T750 250 aa8□□□□□ -1.13
PTPRN-206ENST00000442029 NHP2Q9NX24 153 aaKnown RBP8□□□□□ -1.13
PTPRN-206ENST00000442029 COX8AP10176 69 aa7.99□□□□□ -1.13
PTPRN-206ENST00000442029 CD164Q04900 197 aa7.99□□□□□ -1.13
PTPRN-206ENST00000442029 H7C2G1 150 aa7.98□□□□□ -1.13
PTPRN-206ENST00000442029 DLEU1O43261 78 aa7.98□□□□□ -1.13
PTPRN-206ENST00000442029 LINC01547P58512 204 aaPredicted RBP7.97□□□□□ -1.13
PTPRN-206ENST00000442029 IGLV5-48A0A075B6I7 105 aa7.95□□□□□ -1.14
PTPRN-206ENST00000442029 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
PTPRN-206ENST00000442029 VAMP3Q15836 100 aa7.95□□□□□ -1.14
PTPRN-206ENST00000442029 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
PTPRN-206ENST00000442029 C14orf144Q96I85 54 aa7.95□□□□□ -1.14
PTPRN-206ENST00000442029 KRTAP9-2Q9BYQ4 174 aa7.95□□□□□ -1.14
PTPRN-206ENST00000442029 SMIM29Q86T20 159 aa7.94□□□□□ -1.14
PTPRN-206ENST00000442029 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
PTPRN-206ENST00000442029 SMIM6P0DI80 62 aa7.93□□□□□ -1.14
PTPRN-206ENST00000442029 LOC105371267A0A1B0GV96 52 aa7.92□□□□□ -1.14
PTPRN-206ENST00000442029 F8WEM9 126 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms