RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 HIST1H2BBP33778 126 aa15.29■□□□□ 0.04
MRPL28-204ENST00000441883 HIST1H2BDP58876 126 aa15.29■□□□□ 0.04
MRPL28-204ENST00000441883 HIST1H2BCP62807 126 aa15.29■□□□□ 0.04
MRPL28-204ENST00000441883 HIST2H2BEQ16778 126 aa15.29■□□□□ 0.04
MRPL28-204ENST00000441883 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.29■□□□□ 0.04
MRPL28-204ENST00000441883 HIST1H2BHQ93079 126 aa15.29■□□□□ 0.04
MRPL28-204ENST00000441883 HIST1H2BNQ99877 126 aa15.29■□□□□ 0.04
MRPL28-204ENST00000441883 HIST1H2BMQ99879 126 aa15.29■□□□□ 0.04
MRPL28-204ENST00000441883 TRAV23DV6A0A075B6W5 121 aa15.28■□□□□ 0.04
MRPL28-204ENST00000441883 MOBPQ13875 183 aa15.28■□□□□ 0.04
MRPL28-204ENST00000441883 IGLV9-49A0A0B4J1Y8 123 aa15.27■□□□□ 0.04
MRPL28-204ENST00000441883 SSBP3-AS1Q7Z2R9 100 aa15.27■□□□□ 0.04
MRPL28-204ENST00000441883 LITAFQ99732 161 aa15.26■□□□□ 0.03
MRPL28-204ENST00000441883 KRTAP13-3Q3SY46 172 aa15.25■□□□□ 0.03
MRPL28-204ENST00000441883 LCE2AQ5TA79 106 aaPredicted RBP15.25■□□□□ 0.03
MRPL28-204ENST00000441883 ZNF73O43830 326 aaPredicted RBP15.24■□□□□ 0.03
MRPL28-204ENST00000441883 LINC01545Q5VT33 79 aa15.24■□□□□ 0.03
MRPL28-204ENST00000441883 JOSD1Q15040 202 aaPredicted RBP15.22■□□□□ 0.03
MRPL28-204ENST00000441883 LINC00308Q8TCZ7 52 aa15.21■□□□□ 0.03
MRPL28-204ENST00000441883 RPS29P62273 56 aaKnown RBP15.2■□□□□ 0.02
MRPL28-204ENST00000441883 PET117Q6UWS5 81 aa15.19■□□□□ 0.02
MRPL28-204ENST00000441883 Q8N377 158 aa15.19■□□□□ 0.02
MRPL28-204ENST00000441883 ST20-AS1Q8NBB2 130 aa15.19■□□□□ 0.02
MRPL28-204ENST00000441883 TIMM17BO60830 172 aa15.18■□□□□ 0.02
MRPL28-204ENST00000441883 SPANXCQ9NY87 97 aa15.17■□□□□ 0.02
MRPL28-204ENST00000441883 TTTY13Q9BZ97 58 aa15.15■□□□□ 0.02
MRPL28-204ENST00000441883 C5orf52A6NGY3 159 aa15.13■□□□□ 0.01
MRPL28-204ENST00000441883 C3orf79P0CE67 100 aa15.13■□□□□ 0.01
MRPL28-204ENST00000441883 ZNF815PA8K554 130 aa15.12■□□□□ 0.01
MRPL28-204ENST00000441883 OR13C6PQ8NH95 151 aa15.12■□□□□ 0.01
MRPL28-204ENST00000441883 CBY1Q9Y3M2 126 aa15.12■□□□□ 0.01
MRPL28-204ENST00000441883 HINT1P49773 126 aaPredicted RBP15.11■□□□□ 0.01
MRPL28-204ENST00000441883 SLC25A20O43772 301 aa15.1■□□□□ 0.01
MRPL28-204ENST00000441883 ASB16-AS1Q495Z4 193 aa15.1■□□□□ 0.01
MRPL28-204ENST00000441883 C9orf153Q5TBE3 101 aa15.1■□□□□ 0.01
MRPL28-204ENST00000441883 COA6Q5JTJ3 125 aaKnown RBP15.09■□□□□ 0.01
MRPL28-204ENST00000441883 SPRR1BP22528 89 aa15.08■□□□□ 0
MRPL28-204ENST00000441883 SPANXDQ9BXN6 97 aa15.08■□□□□ 0
MRPL28-204ENST00000441883 DHRS4-AS1Q9P1J3 65 aa15.04■□□□□ -0
MRPL28-204ENST00000441883 KRTDAPP60985 99 aa15.03■□□□□ -0
MRPL28-204ENST00000441883 LINC00518Q8N0U6 118 aa15.02■□□□□ -0
MRPL28-204ENST00000441883 KRTAP4-1Q9BYQ7 146 aa15.02■□□□□ -0
MRPL28-204ENST00000441883 ELOF1P60002 83 aaKnown RBP15□□□□□ -0.01
MRPL28-204ENST00000441883 C6orf99Q4VX62 202 aa15□□□□□ -0.01
MRPL28-204ENST00000441883 COX7BP24311 80 aa14.99□□□□□ -0.01
MRPL28-204ENST00000441883 ANKRD39Q53RE8 183 aa14.99□□□□□ -0.01
MRPL28-204ENST00000441883 KRTAP9-2Q9BYQ4 174 aa14.99□□□□□ -0.01
MRPL28-204ENST00000441883 SEC61BP60468 96 aaKnown RBP14.97□□□□□ -0.01
MRPL28-204ENST00000441883 XP32Q5T750 250 aa14.95□□□□□ -0.02
MRPL28-204ENST00000441883 SLC25A34Q6PIV7 304 aa14.95□□□□□ -0.02
MRPL28-204ENST00000441883 SCGB1D4Q6XE38 83 aa14.95□□□□□ -0.02
MRPL28-204ENST00000441883 LAMTOR3Q9UHA4 124 aa14.94□□□□□ -0.02
MRPL28-204ENST00000441883 ATOH7Q8N100 152 aa14.92□□□□□ -0.02
MRPL28-204ENST00000441883 TRBV7-6A0A0J9YX20 115 aa14.91□□□□□ -0.02
MRPL28-204ENST00000441883 C20orf202A1L168 122 aa14.91□□□□□ -0.02
MRPL28-204ENST00000441883 HRCT1Q6UXD1 115 aa14.91□□□□□ -0.02
MRPL28-204ENST00000441883 IFITM1P13164 125 aa14.9□□□□□ -0.02
MRPL28-204ENST00000441883 TAL2Q16559 108 aa14.9□□□□□ -0.02
MRPL28-204ENST00000441883 PCP2Q8IVA1 136 aa14.9□□□□□ -0.02
MRPL28-204ENST00000441883 DEFB105AQ8NG35 78 aa14.89□□□□□ -0.03
MRPL28-204ENST00000441883 MUSTN1Q8IVN3 82 aa14.88□□□□□ -0.03
MRPL28-204ENST00000441883 Q1RN00 199 aa14.87□□□□□ -0.03
MRPL28-204ENST00000441883 Q6ZVH6 145 aa14.87□□□□□ -0.03
MRPL28-204ENST00000441883 TEX49A0A1B0GTD5 131 aa14.86□□□□□ -0.03
MRPL28-204ENST00000441883 SMIM29Q86T20 159 aa14.86□□□□□ -0.03
MRPL28-204ENST00000441883 COPS9Q8WXC6 57 aa14.86□□□□□ -0.03
MRPL28-204ENST00000441883 LIMD2Q9BT23 127 aa14.86□□□□□ -0.03
MRPL28-204ENST00000441883 A0A1B0GWB2 263 aa14.85□□□□□ -0.03
MRPL28-204ENST00000441883 A6NDN8 102 aa14.85□□□□□ -0.03
MRPL28-204ENST00000441883 LINC01547P58512 204 aaPredicted RBP14.84□□□□□ -0.03
MRPL28-204ENST00000441883 CD164Q04900 197 aa14.82□□□□□ -0.04
MRPL28-204ENST00000441883 PRO1933Q9H354 126 aa14.82□□□□□ -0.04
MRPL28-204ENST00000441883 IGLV5-48A0A075B6I7 105 aa14.8□□□□□ -0.04
MRPL28-204ENST00000441883 AKR1D1P51857 326 aa14.79□□□□□ -0.04
MRPL28-204ENST00000441883 SMIM11BQ8TCY0 68 aa14.76□□□□□ -0.05
MRPL28-204ENST00000441883 SNRPEP62304 92 aaKnown RBP14.75□□□□□ -0.05
MRPL28-204ENST00000441883 TRAV13-2A0A0B4J235 113 aa14.74□□□□□ -0.05
MRPL28-204ENST00000441883 A4D1N5 150 aa14.74□□□□□ -0.05
MRPL28-204ENST00000441883 H7C2G1 150 aa14.74□□□□□ -0.05
MRPL28-204ENST00000441883 A0A0G2JQZ4 141 aa14.73□□□□□ -0.05
MRPL28-204ENST00000441883 C9orf92A6NGG3 77 aa14.73□□□□□ -0.05
MRPL28-204ENST00000441883 Q5XG85 94 aa14.73□□□□□ -0.05
MRPL28-204ENST00000441883 HIST3H2BBQ8N257 126 aa14.71□□□□□ -0.05
MRPL28-204ENST00000441883 HIST1H2BLQ99880 126 aa14.69□□□□□ -0.06
MRPL28-204ENST00000441883 PCOTHQ58A44 107 aa14.67□□□□□ -0.06
MRPL28-204ENST00000441883 LCE2CQ5TA81 110 aa14.67□□□□□ -0.06
MRPL28-204ENST00000441883 C1orf195Q5TG92 126 aa14.67□□□□□ -0.06
MRPL28-204ENST00000441883 NHP2Q9NX24 153 aaKnown RBP14.67□□□□□ -0.06
MRPL28-204ENST00000441883 KRTAP19-2Q3LHN2 52 aa14.64□□□□□ -0.07
MRPL28-204ENST00000441883 S100A2P29034 98 aa14.61□□□□□ -0.07
MRPL28-204ENST00000441883 LINC00575Q6W349 94 aa14.6□□□□□ -0.07
MRPL28-204ENST00000441883 IGLV8-61A0A075B6I0 122 aa14.59□□□□□ -0.07
MRPL28-204ENST00000441883 VAMP3Q15836 100 aa14.58□□□□□ -0.08
MRPL28-204ENST00000441883 HSBP1L1C9JCN9 74 aa14.57□□□□□ -0.08
MRPL28-204ENST00000441883 Q6ZQY7 126 aa14.53□□□□□ -0.08
MRPL28-204ENST00000441883 KRTAP9-6A0A140TA67 174 aa14.52□□□□□ -0.09
MRPL28-204ENST00000441883 hADV29S1A0JD25 119 aa14.52□□□□□ -0.09
MRPL28-204ENST00000441883 F8WEM9 126 aa14.49□□□□□ -0.09
MRPL28-204ENST00000441883 TCL1BO95988 128 aa14.49□□□□□ -0.09
MRPL28-204ENST00000441883 S100A6P06703 90 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms