RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 TXNDC17Q9BRA2 123 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 SPAG17Q6Q759 2223 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 AHCTF1Q8WYP5 2266 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 NOTCH1P46531 2555 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 NUPR2A6NF83 97 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 DNAL4O96015 105 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 CNBPP62633 177 aaKnown RBP2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 SERF2P84101 59 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 PLAC8Q9NZF1 115 aa2.26□□□□□ -2.05
CDC42BPA-207ENST00000441725 J3QRE1 110 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 SPINK4O60575 86 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 HRES1P13985 223 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 NREPQ16612 68 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 DMAC1Q96GE9 116 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 M0R135 149 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 FAM74A4Q5TZK3 123 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 ENHOQ6UWT2 76 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 Q9BRP9 147 aa2.25□□□□□ -2.05
CDC42BPA-207ENST00000441725 GOLGA4Q13439 2230 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-207ENST00000441725 MED13LQ71F56 2210 aa2.24□□□□□ -2.05
CDC42BPA-207ENST00000441725 ICE1Q9Y2F5 2266 aa2.24□□□□□ -2.05
CDC42BPA-207ENST00000441725 SPTBN1Q01082 2364 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-207ENST00000441725 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
CDC42BPA-207ENST00000441725 FLNAP21333 2647 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-207ENST00000441725 IGKV3OR2-268A0A0C4DH90 116 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 CTXND1A0A1B0GTU2 59 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 F8VRH5 84 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 SPINK7P58062 85 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 CCDC168Q8NDH2 2452 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 APCP25054 2843 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 A0A1B0GUT8 65 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 WFDC9Q8NEX5 89 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 OBSCN-AS1Q96MR7 158 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 WFDC6Q9BQY6 131 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 FREM1Q5H8C1 2179 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 JMJD1CQ15652 2540 aa2.23□□□□□ -2.05
CDC42BPA-207ENST00000441725 CEP192Q8TEP8 1941 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 TRAV21A0A0B4J279 112 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 PDE6HQ13956 83 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 Q86TA4 180 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 TIMM8BQ9Y5J9 83 aaPredicted RBP2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 CACNA1EQ15878 2313 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 AKAP9Q99996 3911 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 RP1L1Q8IWN7 2480 aaPredicted RBP2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 CCL3L1P16619 93 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 CCL18P55774 89 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 FXYD6P3P58550 94 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 COX7B2Q8TF08 81 aa2.22□□□□□ -2.05
CDC42BPA-207ENST00000441725 DEFB134Q4QY38 66 aa2.21□□□□□ -2.06
CDC42BPA-207ENST00000441725 AMELXQ99217 191 aa2.21□□□□□ -2.06
CDC42BPA-207ENST00000441725 ALPK2Q86TB3 2170 aa2.21□□□□□ -2.06
CDC42BPA-207ENST00000441725 LCE6AA0A183 80 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 COX6B1P14854 86 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 PLNP26678 52 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 PRR9Q5T870 116 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 IGFL1Q6UW32 110 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 DEFB124Q8NES8 71 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 HIGD2AQ9BW72 106 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 TGP01266 2768 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 IGLV3-1P01715 115 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 ZCCHC13Q8WW36 166 aaKnown RBP2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 LINC00208Q96KT6 92 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 CSMD2Q7Z408 3487 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 RTTNQ86VV8 2226 aa2.2□□□□□ -2.06
CDC42BPA-207ENST00000441725 ASCC3Q8N3C0 2202 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 M0R1W7 72 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 ZNF137PP52743 207 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 HCP5Q6MZN7 132 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 TNCP24821 2201 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 COL6A5A8TX70 2615 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 I3L3M4 83 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 RNASE3P12724 160 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 FXYD3Q14802 87 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 PATE1Q8WXA2 126 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 SPRR4Q96PI1 79 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 R4GMQ9 66 aa2.19□□□□□ -2.06
CDC42BPA-207ENST00000441725 A0A087WTM6 91 aa2.18□□□□□ -2.06
CDC42BPA-207ENST00000441725 LINC01546A6NGU7 62 aa2.18□□□□□ -2.06
CDC42BPA-207ENST00000441725 IGIPA6NJ69 53 aa2.18□□□□□ -2.06
CDC42BPA-207ENST00000441725 CTSGP08311 255 aa2.18□□□□□ -2.06
CDC42BPA-207ENST00000441725 UBL5Q9BZL1 73 aa2.18□□□□□ -2.06
CDC42BPA-207ENST00000441725 RYR3Q15413 4870 aa2.18□□□□□ -2.06
CDC42BPA-207ENST00000441725 H0Y9P7 68 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 PDE6GP18545 87 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 LINC00322Q6ZN03 302 aaPredicted RBP2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 PRO2289Q9P1D8 64 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 NDUFB1O75438 58 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 PRB2P02812 416 aaPredicted RBP2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 ARL14EPLP0DKL9 152 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 KRTAP5-9P26371 169 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 KLK9Q9UKQ9 250 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 NBASA2RRP1 2371 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 CSPG4Q6UVK1 2322 aa2.17□□□□□ -2.06
CDC42BPA-207ENST00000441725 MEGF8Q7Z7M0 2845 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 A0A1W2PNN7 141 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 PIN1P1O15428 100 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms