RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 DNAH9Q9NYC9 4486 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 A0A096LNI7 61 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 GVQW2A0A096LPI5 108 aaPredicted RBP3.12□□□□□ -1.91
SCN3A-204ENST00000440431 IGKV3D-7A0A0C4DH55 119 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 LINC00588Q9Y4M8 146 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 Q8N814 137 aa3.12□□□□□ -1.91
SCN3A-204ENST00000440431 TEP1Q99973 2627 aaKnown RBP3.11□□□□□ -1.91
SCN3A-204ENST00000440431 C22orf24Q9Y442 160 aa3.11□□□□□ -1.91
SCN3A-204ENST00000440431 BAHCC1Q9P281 2608 aa3.11□□□□□ -1.91
SCN3A-204ENST00000440431 GIG44P09565 113 aaPredicted RBP3.11□□□□□ -1.91
SCN3A-204ENST00000440431 SEC61GP60059 68 aa3.11□□□□□ -1.91
SCN3A-204ENST00000440431 Q6Q795 121 aa3.11□□□□□ -1.91
SCN3A-204ENST00000440431 Q6ZRP5 223 aa3.11□□□□□ -1.91
SCN3A-204ENST00000440431 PLA2G1BP04054 148 aaKnown RBP3.11□□□□□ -1.91
SCN3A-204ENST00000440431 IGKV4-1P06312 121 aa3.11□□□□□ -1.91
SCN3A-204ENST00000440431 C16orf90A8MZG2 172 aa3.1□□□□□ -1.91
SCN3A-204ENST00000440431 PRKDCP78527 4128 aaKnown RBP3.1□□□□□ -1.91
SCN3A-204ENST00000440431 FAM240AA0A1B0GVK7 77 aa3.1□□□□□ -1.91
SCN3A-204ENST00000440431 IGLV9-49A0A0B4J1Y8 123 aa3.1□□□□□ -1.91
SCN3A-204ENST00000440431 SLPIP03973 132 aa3.1□□□□□ -1.91
SCN3A-204ENST00000440431 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
SCN3A-204ENST00000440431 LINC00575Q6W349 94 aa3.09□□□□□ -1.91
SCN3A-204ENST00000440431 FAM19A3Q7Z5A8 133 aa3.09□□□□□ -1.91
SCN3A-204ENST00000440431 MAST4O15021 2626 aa3.09□□□□□ -1.91
SCN3A-204ENST00000440431 RTL8CO15255 209 aa3.09□□□□□ -1.91
SCN3A-204ENST00000440431 NDUFC1O43677 76 aa3.09□□□□□ -1.91
SCN3A-204ENST00000440431 KRTAP10-11P60412 298 aa3.09□□□□□ -1.91
SCN3A-204ENST00000440431 Q9BRP9 147 aa3.09□□□□□ -1.91
SCN3A-204ENST00000440431 FAM236AA0A1B0GUQ0 79 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 FAM236BA0A1B0GV22 79 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 SPINK6Q6UWN8 80 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 SPTSSBQ8NFR3 76 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 SMCR5Q8TEV8 140 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 MGAM2Q2M2H8 2515 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 CRYGAP11844 174 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 TSPEAR-AS2P59090 65 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 PRR34Q9NV39 138 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 CIRBP-AS1Q8TBR5 109 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 LINC00167Q96N53 147 aa3.08□□□□□ -1.92
SCN3A-204ENST00000440431 ATP5EP56381 51 aaPredicted RBP3.07□□□□□ -1.92
SCN3A-204ENST00000440431 ADAMTSL4-AS1Q5T5F5 129 aa3.07□□□□□ -1.92
SCN3A-204ENST00000440431 NBEAL2Q6ZNJ1 2754 aa3.07□□□□□ -1.92
SCN3A-204ENST00000440431 Q9UF83 564 aa3.06□□□□□ -1.92
SCN3A-204ENST00000440431 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
SCN3A-204ENST00000440431 ATRQ13535 2644 aa3.06□□□□□ -1.92
SCN3A-204ENST00000440431 BCE1O60756 84 aa3.06□□□□□ -1.92
SCN3A-204ENST00000440431 LINC00337Q8N6G1 96 aa3.06□□□□□ -1.92
SCN3A-204ENST00000440431 DNAH10Q8IVF4 4471 aa3.06□□□□□ -1.92
SCN3A-204ENST00000440431 UQCRQO14949 82 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 TLX1NBP0CAT3 122 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 APLNQ9ULZ1 77 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 C9orf163Q8N9P6 203 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 Q8NBF4 154 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 PLA2G2DQ9UNK4 145 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 Q8N9L7 120 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 TENM3Q9P273 2699 aa3.05□□□□□ -1.92
SCN3A-204ENST00000440431 RPL37AP61513 92 aaKnown RBP3.04□□□□□ -1.92
SCN3A-204ENST00000440431 RPS28P62857 69 aaKnown RBP3.04□□□□□ -1.92
SCN3A-204ENST00000440431 HRCT1Q6UXD1 115 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 C3orf22Q8N5N4 141 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 V9GYY9 64 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 PLECQ15149 4684 aaKnown RBP3.04□□□□□ -1.92
SCN3A-204ENST00000440431 STARD9Q9P2P6 4700 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 A0A087WTM6 91 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 TRBV7-7A0A0K0K1E9 115 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 ELOF1P60002 83 aaKnown RBP3.04□□□□□ -1.92
SCN3A-204ENST00000440431 PRR3P79522 188 aaKnown RBP3.04□□□□□ -1.92
SCN3A-204ENST00000440431 Q6ZRX8 168 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 SSBP3-AS1Q7Z2R9 100 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 STAB1Q9NY15 2570 aa3.04□□□□□ -1.92
SCN3A-204ENST00000440431 A0A087WSZ3 146 aa3.03□□□□□ -1.92
SCN3A-204ENST00000440431 PRLHP81277 87 aa3.03□□□□□ -1.92
SCN3A-204ENST00000440431 WFDC13Q8IUB5 93 aa3.03□□□□□ -1.92
SCN3A-204ENST00000440431 SERP2Q8N6R1 65 aa3.03□□□□□ -1.92
SCN3A-204ENST00000440431 K7ERS5 55 aa3.03□□□□□ -1.92
SCN3A-204ENST00000440431 SDIM1Q6ZPB5 146 aa3.03□□□□□ -1.92
SCN3A-204ENST00000440431 PRR15LQ9BU68 103 aa3.03□□□□□ -1.92
SCN3A-204ENST00000440431 CNBPP62633 177 aaKnown RBP3.03□□□□□ -1.93
SCN3A-204ENST00000440431 KRTAP21-3Q3LHN1 58 aa3.03□□□□□ -1.93
SCN3A-204ENST00000440431 TYMSOSQ8TAI1 123 aa3.03□□□□□ -1.93
SCN3A-204ENST00000440431 A0A087WYN8 130 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 VPREB1P12018 145 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 SCXQ7RTU7 201 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 TP53AIP1Q9HCN2 124 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 NBEAL1Q6ZS30 2694 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 TRAV7A0A075B6U4 112 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 LINC01600Q96MT4 127 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 CXCL6P80162 114 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 C4orf26Q17RF5 130 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 C20orf197Q8N268 126 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 KCNQ1DNQ9H478 68 aa3.02□□□□□ -1.93
SCN3A-204ENST00000440431 MEGF8Q7Z7M0 2845 aa3.01□□□□□ -1.93
SCN3A-204ENST00000440431 KIAA0087Q14695 138 aa3.01□□□□□ -1.93
SCN3A-204ENST00000440431 PHF5AQ7RTV0 110 aaKnown RBP3.01□□□□□ -1.93
SCN3A-204ENST00000440431 DNAH2Q9P225 4427 aa3.01□□□□□ -1.93
SCN3A-204ENST00000440431 SERP1Q9Y6X1 66 aa3.01□□□□□ -1.93
SCN3A-204ENST00000440431 IGHV6-1A0A0B4J1U7 121 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms