RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 UBR5O95071 2799 aaPredicted RBP10.73□□□□□ -0.69
DHFR-201ENST00000439211 UNQ6190/PRO20217Q6UXQ8 127 aa10.73□□□□□ -0.69
DHFR-201ENST00000439211 KTN1-AS1Q86SY8 53 aa10.73□□□□□ -0.69
DHFR-201ENST00000439211 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
DHFR-201ENST00000439211 INAFM1C9JVW0 142 aa10.71□□□□□ -0.69
DHFR-201ENST00000439211 C9orf66Q5T8R8 295 aa10.71□□□□□ -0.7
DHFR-201ENST00000439211 Q1T7F1 81 aa10.7□□□□□ -0.7
DHFR-201ENST00000439211 SPART-AS1P0CW21 52 aa10.7□□□□□ -0.7
DHFR-201ENST00000439211 MAST4O15021 2626 aa10.7□□□□□ -0.7
DHFR-201ENST00000439211 MGAM2Q2M2H8 2515 aa10.69□□□□□ -0.7
DHFR-201ENST00000439211 MP68P56378 58 aa10.69□□□□□ -0.7
DHFR-201ENST00000439211 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
DHFR-201ENST00000439211 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
DHFR-201ENST00000439211 UNC79Q9P2D8 2635 aa10.68□□□□□ -0.7
DHFR-201ENST00000439211 HCG22E2RYF7 251 aa10.68□□□□□ -0.7
DHFR-201ENST00000439211 SYCNQ0VAF6 134 aa10.67□□□□□ -0.7
DHFR-201ENST00000439211 X6R8D5 127 aa10.67□□□□□ -0.7
DHFR-201ENST00000439211 CYSRT1A8MQ03 144 aa10.67□□□□□ -0.7
DHFR-201ENST00000439211 IGKV4-1P06312 121 aa10.67□□□□□ -0.7
DHFR-201ENST00000439211 CAMK2N2Q96S95 79 aa10.65□□□□□ -0.7
DHFR-201ENST00000439211 NDUFS5O43920 106 aa10.65□□□□□ -0.7
DHFR-201ENST00000439211 ZNF73O43830 326 aaPredicted RBP10.65□□□□□ -0.7
DHFR-201ENST00000439211 COX17Q14061 63 aa10.65□□□□□ -0.7
DHFR-201ENST00000439211 C10orf25Q5T742 122 aa10.64□□□□□ -0.71
DHFR-201ENST00000439211 ETDCA0A1B0GVM5 59 aa10.64□□□□□ -0.71
DHFR-201ENST00000439211 A8MU10 97 aa10.63□□□□□ -0.71
DHFR-201ENST00000439211 NDUFB1O75438 58 aa10.62□□□□□ -0.71
DHFR-201ENST00000439211 TEP1Q99973 2627 aaKnown RBP10.61□□□□□ -0.71
DHFR-201ENST00000439211 LINC00208Q96KT6 92 aa10.6□□□□□ -0.71
DHFR-201ENST00000439211 PSCAO43653 123 aa10.6□□□□□ -0.71
DHFR-201ENST00000439211 M0R378 163 aa10.6□□□□□ -0.71
DHFR-201ENST00000439211 WFDC13Q8IUB5 93 aa10.59□□□□□ -0.71
DHFR-201ENST00000439211 IGKV2D-24A0A075B6R9 120 aa10.59□□□□□ -0.71
DHFR-201ENST00000439211 KRTAP1-1Q07627 177 aa10.59□□□□□ -0.71
DHFR-201ENST00000439211 B9D2Q9BPU9 175 aa10.59□□□□□ -0.71
DHFR-201ENST00000439211 C11orf45Q8TAV5 145 aa10.59□□□□□ -0.71
DHFR-201ENST00000439211 DEFB116Q30KQ4 102 aa10.58□□□□□ -0.72
DHFR-201ENST00000439211 LELP1Q5T871 98 aa10.58□□□□□ -0.72
DHFR-201ENST00000439211 LIMD2Q9BT23 127 aa10.58□□□□□ -0.72
DHFR-201ENST00000439211 KRTAP10-3P60369 221 aa10.57□□□□□ -0.72
DHFR-201ENST00000439211 KIAA0087Q14695 138 aa10.57□□□□□ -0.72
DHFR-201ENST00000439211 WFDC10BQ8IUB3 73 aa10.56□□□□□ -0.72
DHFR-201ENST00000439211 IGHV4-30-4P0DP06 118 aa10.55□□□□□ -0.72
DHFR-201ENST00000439211 LINC00588Q9Y4M8 146 aa10.55□□□□□ -0.72
DHFR-201ENST00000439211 C16orf90A8MZG2 172 aa10.53□□□□□ -0.72
DHFR-201ENST00000439211 ATP11AUNQ6ZP68 121 aa10.53□□□□□ -0.72
DHFR-201ENST00000439211 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.53□□□□□ -0.72
DHFR-201ENST00000439211 NKAPP1Q8N9T2 125 aa10.52□□□□□ -0.73
DHFR-201ENST00000439211 Q5VV11 94 aa10.52□□□□□ -0.73
DHFR-201ENST00000439211 KPRPQ5T749 579 aaPredicted RBP10.51□□□□□ -0.73
DHFR-201ENST00000439211 Q8NDZ9 215 aa10.51□□□□□ -0.73
DHFR-201ENST00000439211 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
DHFR-201ENST00000439211 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
DHFR-201ENST00000439211 A0A0J9YWU9 116 aa10.5□□□□□ -0.73
DHFR-201ENST00000439211 ST20-AS1Q8NBB2 130 aa10.5□□□□□ -0.73
DHFR-201ENST00000439211 VWFP04275 2813 aa10.49□□□□□ -0.73
DHFR-201ENST00000439211 IGLV6-57P01721 117 aa10.48□□□□□ -0.73
DHFR-201ENST00000439211 H3BS24 57 aa10.48□□□□□ -0.73
DHFR-201ENST00000439211 C6orf48Q9UBA6 75 aa10.48□□□□□ -0.73
DHFR-201ENST00000439211 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
DHFR-201ENST00000439211 Q8NAQ8 132 aa10.47□□□□□ -0.73
DHFR-201ENST00000439211 C7orf65Q6ZTY9 151 aa10.47□□□□□ -0.73
DHFR-201ENST00000439211 NBPF19A0A087WUL8 3843 aa10.45□□□□□ -0.74
DHFR-201ENST00000439211 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
DHFR-201ENST00000439211 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
DHFR-201ENST00000439211 HIVEP1P15822 2718 aa10.44□□□□□ -0.74
DHFR-201ENST00000439211 ZNF469Q96JG9 3925 aaPredicted RBP10.43□□□□□ -0.74
DHFR-201ENST00000439211 K7EQZ3 153 aa10.43□□□□□ -0.74
DHFR-201ENST00000439211 LCA10Q71F78 164 aa10.42□□□□□ -0.74
DHFR-201ENST00000439211 CYP4F30PQ9H0H9 118 aa10.42□□□□□ -0.74
DHFR-201ENST00000439211 Q8N9P0 234 aaPredicted RBP10.4□□□□□ -0.74
DHFR-201ENST00000439211 TENM4Q6N022 2769 aa10.4□□□□□ -0.74
DHFR-201ENST00000439211 DEFB131BA0A096LNP1 70 aa10.4□□□□□ -0.74
DHFR-201ENST00000439211 MDFIQ99750 246 aa10.4□□□□□ -0.74
DHFR-201ENST00000439211 H0Y9P7 68 aa10.39□□□□□ -0.75
DHFR-201ENST00000439211 NBEAL1Q6ZS30 2694 aa10.39□□□□□ -0.75
DHFR-201ENST00000439211 SPAG11AQ6PDA7 123 aa10.39□□□□□ -0.75
DHFR-201ENST00000439211 STAB1Q9NY15 2570 aa10.39□□□□□ -0.75
DHFR-201ENST00000439211 RPL37AP8A6NKH3 93 aa10.39□□□□□ -0.75
DHFR-201ENST00000439211 EGFEM1PQ0D2K5 195 aa10.38□□□□□ -0.75
DHFR-201ENST00000439211 C8orf87E5RJ46 101 aa10.37□□□□□ -0.75
DHFR-201ENST00000439211 TENM1Q9UKZ4 2725 aa10.37□□□□□ -0.75
DHFR-201ENST00000439211 NSD1Q96L73 2696 aaPredicted RBP10.36□□□□□ -0.75
DHFR-201ENST00000439211 PRR34Q9NV39 138 aa10.36□□□□□ -0.75
DHFR-201ENST00000439211 LOC101927531A0A1B0GV80 90 aa10.34□□□□□ -0.75
DHFR-201ENST00000439211 PCOTHQ58A44 107 aa10.34□□□□□ -0.75
DHFR-201ENST00000439211 CASC2Q6XLA1 102 aa10.34□□□□□ -0.75
DHFR-201ENST00000439211 CDC42SE1Q9NRR8 79 aa10.32□□□□□ -0.76
DHFR-201ENST00000439211 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
DHFR-201ENST00000439211 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
DHFR-201ENST00000439211 VPREB1P12018 145 aa10.31□□□□□ -0.76
DHFR-201ENST00000439211 COA5Q86WW8 74 aa10.31□□□□□ -0.76
DHFR-201ENST00000439211 PHF5AQ7RTV0 110 aaKnown RBP10.3□□□□□ -0.76
DHFR-201ENST00000439211 Q8NBF4 154 aa10.29□□□□□ -0.76
DHFR-201ENST00000439211 PRAC1Q96KF2 57 aa10.29□□□□□ -0.76
DHFR-201ENST00000439211 BAHCC1Q9P281 2608 aa10.29□□□□□ -0.76
DHFR-201ENST00000439211 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
DHFR-201ENST00000439211 PDZD2O15018 2839 aa10.28□□□□□ -0.76
DHFR-201ENST00000439211 A0A1W2PNM2 257 aa10.28□□□□□ -0.76
DHFR-201ENST00000439211 ZCCHC13Q8WW36 166 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms