RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 LINC00518Q8N0U6 118 aa6.57□□□□□ -1.36
CSTF3-203ENST00000438862 COPS9Q8WXC6 57 aa6.57□□□□□ -1.36
CSTF3-203ENST00000438862 C14orf144Q96I85 54 aa6.57□□□□□ -1.36
CSTF3-203ENST00000438862 C12orf57Q99622 126 aa6.57□□□□□ -1.36
CSTF3-203ENST00000438862 TTTY13Q9BZ97 58 aa6.57□□□□□ -1.36
CSTF3-203ENST00000438862 HIGD1BQ9P298 99 aa6.57□□□□□ -1.36
CSTF3-203ENST00000438862 SMIM13P0DJ93 91 aa6.56□□□□□ -1.36
CSTF3-203ENST00000438862 PFN2P35080 140 aa6.56□□□□□ -1.36
CSTF3-203ENST00000438862 LITAFQ99732 161 aa6.56□□□□□ -1.36
CSTF3-203ENST00000438862 SPANXB1Q9NS25 103 aaPredicted RBP6.56□□□□□ -1.36
CSTF3-203ENST00000438862 UQCR10Q9UDW1 63 aa6.56□□□□□ -1.36
CSTF3-203ENST00000438862 IFITM1P13164 125 aa6.55□□□□□ -1.36
CSTF3-203ENST00000438862 RPL18AQ02543 176 aaKnown RBP6.55□□□□□ -1.36
CSTF3-203ENST00000438862 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
CSTF3-203ENST00000438862 SPANXDQ9BXN6 97 aa6.55□□□□□ -1.36
CSTF3-203ENST00000438862 SPANXCQ9NY87 97 aa6.55□□□□□ -1.36
CSTF3-203ENST00000438862 SND1-IT1Q9HBX3 110 aa6.54□□□□□ -1.36
CSTF3-203ENST00000438862 CRYGAP11844 174 aa6.53□□□□□ -1.36
CSTF3-203ENST00000438862 TAL2Q16559 108 aa6.53□□□□□ -1.36
CSTF3-203ENST00000438862 GAGE2EQ4V326 116 aa6.53□□□□□ -1.36
CSTF3-203ENST00000438862 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
CSTF3-203ENST00000438862 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
CSTF3-203ENST00000438862 MIEN1Q9BRT3 115 aa6.53□□□□□ -1.36
CSTF3-203ENST00000438862 GAGE2DQ9UEU5 116 aa6.53□□□□□ -1.36
CSTF3-203ENST00000438862 TP73-AS1Q9UF72 201 aa6.53□□□□□ -1.36
CSTF3-203ENST00000438862 A0A0U1RRA0 63 aa6.52□□□□□ -1.37
CSTF3-203ENST00000438862 TSTD3H0UI37 97 aa6.52□□□□□ -1.37
CSTF3-203ENST00000438862 NDUFC2O95298 119 aa6.52□□□□□ -1.37
CSTF3-203ENST00000438862 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
CSTF3-203ENST00000438862 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
CSTF3-203ENST00000438862 C9orf129Q5T035 196 aaKnown RBP6.52□□□□□ -1.37
CSTF3-203ENST00000438862 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
CSTF3-203ENST00000438862 LINC00308Q8TCZ7 52 aa6.51□□□□□ -1.37
CSTF3-203ENST00000438862 XAGE1AQ9HD64 81 aa6.51□□□□□ -1.37
CSTF3-203ENST00000438862 IGLV7-46A0A075B6I9 117 aa6.5□□□□□ -1.37
CSTF3-203ENST00000438862 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
CSTF3-203ENST00000438862 TYMSOSQ8TAI1 123 aa6.5□□□□□ -1.37
CSTF3-203ENST00000438862 RETNLBQ9BQ08 111 aa6.5□□□□□ -1.37
CSTF3-203ENST00000438862 ZNF861PO60384 105 aa6.49□□□□□ -1.37
CSTF3-203ENST00000438862 DAND5Q8N907 189 aa6.49□□□□□ -1.37
CSTF3-203ENST00000438862 HIST1H4GQ99525 98 aa6.49□□□□□ -1.37
CSTF3-203ENST00000438862 TRBV10-2A0A0K0K1G8 114 aa6.48□□□□□ -1.37
CSTF3-203ENST00000438862 VPREB1P12018 145 aa6.48□□□□□ -1.37
CSTF3-203ENST00000438862 UBE2BP63146 152 aa6.48□□□□□ -1.37
CSTF3-203ENST00000438862 LBHQ53QV2 105 aaPredicted RBP6.48□□□□□ -1.37
CSTF3-203ENST00000438862 SOSTDC1Q6X4U4 206 aa6.48□□□□□ -1.37
CSTF3-203ENST00000438862 MUSTN1Q8IVN3 82 aa6.48□□□□□ -1.37
CSTF3-203ENST00000438862 PRO1933Q9H354 126 aa6.48□□□□□ -1.37
CSTF3-203ENST00000438862 A0A087X002 238 aa6.47□□□□□ -1.37
CSTF3-203ENST00000438862 FAM168BA1KXE4 195 aa6.47□□□□□ -1.37
CSTF3-203ENST00000438862 HSD52Q0P140 79 aa6.47□□□□□ -1.37
CSTF3-203ENST00000438862 M0R378 163 aa6.46□□□□□ -1.38
CSTF3-203ENST00000438862 CTAG1AP78358 180 aa6.46□□□□□ -1.38
CSTF3-203ENST00000438862 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
CSTF3-203ENST00000438862 KRTAP7-1Q8IUC3 87 aa6.46□□□□□ -1.38
CSTF3-203ENST00000438862 NKAPP1Q8N9T2 125 aa6.46□□□□□ -1.38
CSTF3-203ENST00000438862 C22orf24Q9Y442 160 aa6.46□□□□□ -1.38
CSTF3-203ENST00000438862 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
CSTF3-203ENST00000438862 CEND1Q8N111 149 aa6.45□□□□□ -1.38
CSTF3-203ENST00000438862 CBY1Q9Y3M2 126 aa6.45□□□□□ -1.38
CSTF3-203ENST00000438862 M0QXV9 152 aa6.44□□□□□ -1.38
CSTF3-203ENST00000438862 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
CSTF3-203ENST00000438862 TRAV13-2A0A0B4J235 113 aa6.43□□□□□ -1.38
CSTF3-203ENST00000438862 A4D1N5 150 aa6.43□□□□□ -1.38
CSTF3-203ENST00000438862 DDTP30046 118 aa6.43□□□□□ -1.38
CSTF3-203ENST00000438862 NPC2P61916 151 aa6.43□□□□□ -1.38
CSTF3-203ENST00000438862 Q8NDZ9 215 aa6.43□□□□□ -1.38
CSTF3-203ENST00000438862 TMEM126AQ9H061 195 aa6.43□□□□□ -1.38
CSTF3-203ENST00000438862 M0R143 59 aa6.42□□□□□ -1.38
CSTF3-203ENST00000438862 CFC1BP0CG36 223 aa6.42□□□□□ -1.38
CSTF3-203ENST00000438862 LINC00304Q8N9R0 145 aa6.42□□□□□ -1.38
CSTF3-203ENST00000438862 IGKV2-28A0A075B6P5 120 aa6.41□□□□□ -1.38
CSTF3-203ENST00000438862 IGKV2D-28P01615 120 aa6.41□□□□□ -1.38
CSTF3-203ENST00000438862 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
CSTF3-203ENST00000438862 LINC00337Q8N6G1 96 aa6.41□□□□□ -1.38
CSTF3-203ENST00000438862 LINC00167Q96N53 147 aa6.41□□□□□ -1.38
CSTF3-203ENST00000438862 A0A0B4J2C4 111 aa6.4□□□□□ -1.38
CSTF3-203ENST00000438862 S100A7L2Q5SY68 101 aa6.4□□□□□ -1.38
CSTF3-203ENST00000438862 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
CSTF3-203ENST00000438862 KCNQ1DNQ9H478 68 aa6.4□□□□□ -1.38
CSTF3-203ENST00000438862 A0A1B0GWB2 263 aa6.39□□□□□ -1.39
CSTF3-203ENST00000438862 RPL28P46779 137 aaKnown RBP6.39□□□□□ -1.39
CSTF3-203ENST00000438862 FXYD2P54710 66 aa6.39□□□□□ -1.39
CSTF3-203ENST00000438862 SEC61BP60468 96 aaKnown RBP6.39□□□□□ -1.39
CSTF3-203ENST00000438862 BVES-AS1Q5T3Y7 98 aa6.39□□□□□ -1.39
CSTF3-203ENST00000438862 TRBV10-3A0A0K0K1G6 114 aa6.38□□□□□ -1.39
CSTF3-203ENST00000438862 NCR3O14931 201 aa6.38□□□□□ -1.39
CSTF3-203ENST00000438862 CFC1P0CG37 223 aa6.38□□□□□ -1.39
CSTF3-203ENST00000438862 A6NDN8 102 aa6.37□□□□□ -1.39
CSTF3-203ENST00000438862 PRYO14603 147 aa6.37□□□□□ -1.39
CSTF3-203ENST00000438862 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
CSTF3-203ENST00000438862 OR13C6PQ8NH95 151 aa6.37□□□□□ -1.39
CSTF3-203ENST00000438862 RAB37Q96AX2 223 aa6.37□□□□□ -1.39
CSTF3-203ENST00000438862 PRO1854Q9UHT4 67 aa6.37□□□□□ -1.39
CSTF3-203ENST00000438862 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
CSTF3-203ENST00000438862 SPRR1AP35321 89 aa6.36□□□□□ -1.39
CSTF3-203ENST00000438862 FAM229BQ4G0N7 80 aa6.36□□□□□ -1.39
CSTF3-203ENST00000438862 FP248Q71RG6 208 aaPredicted RBP6.36□□□□□ -1.39
CSTF3-203ENST00000438862 TRAV23DV6A0A075B6W5 121 aa6.35□□□□□ -1.39
CSTF3-203ENST00000438862 TRBV7-6A0A0J9YX20 115 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms