RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	STAB1	Q9NY15	2570 aa		10.46	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	TM2D3	Q9BRN9	247 aa		10.45	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	IGLV5-37	A0A075B6J1	123 aa		10.45	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	BCE1	O60756	84 aa		10.45	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	NKAPP1	Q8N9T2	125 aa		10.45	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	MRAP	Q8TCY5	172 aa		10.45	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	HAMP	P81172	84 aa		10.43	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	CASC10	Q5T4H9	136 aa		10.42	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.41	□□□□□ -0.74
HLA-DQB2-231	ENST00000435145	SPRR1A	P35321	89 aa		10.39	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	RMI2	Q96E14	147 aa		10.39	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	PRY	O14603	147 aa		10.38	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	KRTAP7-1	Q8IUC3	87 aa		10.38	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145		Q8N377	158 aa		10.38	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	IGLV1-50	A0A075B6I6	118 aa		10.38	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	TMEM258	P61165	79 aa		10.38	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145		K7EIL1	84 aa		10.37	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145		Q6ZRX8	168 aa		10.37	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	DHRS4-AS1	Q9P1J3	65 aa		10.37	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	IGLV5-48	A0A075B6I7	105 aa		10.36	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	FAM168B	A1KXE4	195 aa		10.36	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	PRB2	P02812	416 aa	Predicted RBP	10.36	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	TRAV7	A0A075B6U4	112 aa		10.35	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145		Q9BRP9	147 aa		10.34	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	NOTCH1	P46531	2555 aa		10.34	□□□□□ -0.75
HLA-DQB2-231	ENST00000435145	COL6A5	A8TX70	2615 aa		10.33	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	RPL37AP8	A6NKH3	93 aa		10.33	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	DNAH1	Q9P2D7	4330 aa		10.33	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	RPS28	P62857	69 aa	Known RBP	10.33	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	LOC107984640	A0A0U1RRK4	108 aa		10.31	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	SCX	Q7RTU7	201 aa		10.31	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145		J3KT08	172 aa		10.31	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	TNP2	Q05952	138 aa		10.31	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	DEFB105A	Q8NG35	78 aa		10.31	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	ETDC	A0A1B0GVM5	59 aa		10.3	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	MRPL55	Q7Z7F7	128 aa	Known RBP	10.3	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145		A0A1B0GW54	56 aa		10.28	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	C20orf197	Q8N268	126 aa		10.28	□□□□□ -0.76
HLA-DQB2-231	ENST00000435145	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.27	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	NBEAL1	Q6ZS30	2694 aa		10.27	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	NREP	Q16612	68 aa		10.27	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.27	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	DPH3	Q96FX2	82 aa		10.27	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	IGKV4-1	P06312	121 aa		10.26	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	ST20-AS1	Q8NBB2	130 aa		10.25	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145		A0A1W2PNM2	257 aa		10.24	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	ERC2-IT1	O76042	136 aa		10.24	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	KLKP1	Q107X0	134 aa		10.24	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	KRTAP1-5	Q9BYS1	174 aa		10.24	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	C3orf84	H3BNL1	204 aa		10.23	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	CNBP	P62633	177 aa	Known RBP	10.23	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	FUS	P35637	526 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	REG3G	Q6UW15	175 aa		10.22	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145		H7BZZ5	65 aa		10.21	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	C1orf137	Q5JT78	98 aa		10.21	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145		Q8NBF4	154 aa		10.21	□□□□□ -0.77
HLA-DQB2-231	ENST00000435145	BPY2	O14599	106 aa		10.21	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145		Q8N9L7	120 aa		10.21	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145	SPRR4	Q96PI1	79 aa		10.2	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145	C16orf90	A8MZG2	172 aa		10.19	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145	UBE2B	P63146	152 aa		10.19	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145		A0A096LNI7	61 aa		10.19	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145	SMIM29	Q86T20	159 aa		10.19	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145	OXT	P01178	125 aa		10.17	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145	APLN	Q9ULZ1	77 aa		10.16	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145		A0A1W2PNN7	141 aa		10.15	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145	OCR1	Q9BZK8	76 aa		10.15	□□□□□ -0.78
HLA-DQB2-231	ENST00000435145	FAM236D	A0A1B0GTK5	79 aa		10.14	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	FAM236C	P0DP71	79 aa		10.14	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	SNURF	Q9Y675	71 aa		10.14	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	DNHD1	Q96M86	4753 aa		10.12	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	IGKV2-24	A0A0C4DH68	120 aa		10.11	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	PSCA	O43653	123 aa		10.11	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	NDUFC1	O43677	76 aa		10.11	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	C14orf177	Q52M58	125 aa		10.11	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	LINC00476	Q8WZB0	136 aa		10.11	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	IGLV8-61	A0A075B6I0	122 aa		10.11	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	EPM2A	B3EWF7	344 aa		10.11	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	MGAM2	Q2M2H8	2515 aa		10.1	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	STAB2	Q8WWQ8	2551 aa		10.1	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	UBE2DNL	Q8IWF7	75 aa		10.1	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	TMEM254	Q8TBM7	123 aa		10.09	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	DSCR10	P59022	87 aa		10.09	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145	PRLH	P81277	87 aa		10.09	□□□□□ -0.79
HLA-DQB2-231	ENST00000435145		F8WEM9	126 aa		10.08	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	IGFL1	Q6UW32	110 aa		10.07	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	COL7A1	Q02388	2944 aa		10.06	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	SERP1	Q9Y6X1	66 aa		10.06	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145		A0A0U1RQV1	116 aa		10.06	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	KRTAP11-1	Q8IUC1	163 aa		10.06	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.05	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.05	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145		H0Y9J4	135 aa		10.05	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	MDFI	Q99750	246 aa		10.05	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	B9D2	Q9BPU9	175 aa		10.05	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	LRCOL1	A6NCL2	159 aa		10.04	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	DNAH10	Q8IVF4	4471 aa		10.04	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	CHTF8	P0CG12	524 aa		10.04	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	C9orf163	Q8N9P6	203 aa		10.04	□□□□□ -0.8
HLA-DQB2-231	ENST00000435145	LCE6A	A0A183	80 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 824.3 ms