RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ATP5EP2Q5VTU8 51 aa10.32□□□□□ -0.76
SCARF1-203ENST00000434376 LINC00575Q6W349 94 aa10.32□□□□□ -0.76
SCARF1-203ENST00000434376 Q6ZRP5 223 aa10.32□□□□□ -0.76
SCARF1-203ENST00000434376 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
SCARF1-203ENST00000434376 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
SCARF1-203ENST00000434376 FUSP35637 526 aaKnown RBP eCLIP10.31□□□□□ -0.76
SCARF1-203ENST00000434376 SYCNQ0VAF6 134 aa10.3□□□□□ -0.76
SCARF1-203ENST00000434376 Q5XG85 94 aa10.3□□□□□ -0.76
SCARF1-203ENST00000434376 Q6ZQT0 140 aa10.3□□□□□ -0.76
SCARF1-203ENST00000434376 NKAPP1Q8N9T2 125 aa10.3□□□□□ -0.76
SCARF1-203ENST00000434376 UBE2DNLQ8IWF7 75 aa10.29□□□□□ -0.76
SCARF1-203ENST00000434376 DIRC1Q969H9 104 aa10.29□□□□□ -0.76
SCARF1-203ENST00000434376 COX17Q14061 63 aa10.28□□□□□ -0.76
SCARF1-203ENST00000434376 MDFIQ99750 246 aa10.28□□□□□ -0.76
SCARF1-203ENST00000434376 PSCAO43653 123 aa10.28□□□□□ -0.76
SCARF1-203ENST00000434376 ZNF73O43830 326 aaPredicted RBP10.28□□□□□ -0.76
SCARF1-203ENST00000434376 TM2D3Q9BRN9 247 aa10.28□□□□□ -0.76
SCARF1-203ENST00000434376 TRAV7A0A075B6U4 112 aa10.27□□□□□ -0.77
SCARF1-203ENST00000434376 PKIGQ9Y2B9 76 aa10.27□□□□□ -0.77
SCARF1-203ENST00000434376 H7BZZ5 65 aa10.26□□□□□ -0.77
SCARF1-203ENST00000434376 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
SCARF1-203ENST00000434376 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.26□□□□□ -0.77
SCARF1-203ENST00000434376 MPLKIPQ8TAP9 179 aa10.25□□□□□ -0.77
SCARF1-203ENST00000434376 COX7BP24311 80 aa10.24□□□□□ -0.77
SCARF1-203ENST00000434376 EGFEM1PQ0D2K5 195 aa10.24□□□□□ -0.77
SCARF1-203ENST00000434376 LINC00474Q9P2X8 69 aa10.24□□□□□ -0.77
SCARF1-203ENST00000434376 LINC00167Q96N53 147 aa10.23□□□□□ -0.77
SCARF1-203ENST00000434376 C3orf84H3BNL1 204 aa10.23□□□□□ -0.77
SCARF1-203ENST00000434376 MUC7Q8TAX7 377 aa10.23□□□□□ -0.77
SCARF1-203ENST00000434376 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
SCARF1-203ENST00000434376 LINC00336Q6ZUF6 198 aa10.22□□□□□ -0.77
SCARF1-203ENST00000434376 A0A0U1RQV1 116 aa10.22□□□□□ -0.77
SCARF1-203ENST00000434376 WIPF1O43516 503 aa10.22□□□□□ -0.77
SCARF1-203ENST00000434376 A0A0G2JQZ4 141 aa10.21□□□□□ -0.77
SCARF1-203ENST00000434376 A0A1W2PNN7 141 aa10.21□□□□□ -0.77
SCARF1-203ENST00000434376 LINC01556Q5JQF7 62 aa10.2□□□□□ -0.78
SCARF1-203ENST00000434376 SERP1Q9Y6X1 66 aa10.2□□□□□ -0.78
SCARF1-203ENST00000434376 VPREB1P12018 145 aa10.2□□□□□ -0.78
SCARF1-203ENST00000434376 BRK1Q8WUW1 75 aa10.2□□□□□ -0.78
SCARF1-203ENST00000434376 KRTAP26-1Q6PEX3 210 aa10.19□□□□□ -0.78
SCARF1-203ENST00000434376 DNAH10Q8IVF4 4471 aa10.18□□□□□ -0.78
SCARF1-203ENST00000434376 IGLV6-57P01721 117 aa10.18□□□□□ -0.78
SCARF1-203ENST00000434376 BPY2O14599 106 aa10.18□□□□□ -0.78
SCARF1-203ENST00000434376 NREPQ16612 68 aa10.17□□□□□ -0.78
SCARF1-203ENST00000434376 C7orf33Q8WU49 177 aa10.17□□□□□ -0.78
SCARF1-203ENST00000434376 A0A096LNI7 61 aa10.17□□□□□ -0.78
SCARF1-203ENST00000434376 LRCOL1A6NCL2 159 aa10.17□□□□□ -0.78
SCARF1-203ENST00000434376 UBE2BP63146 152 aa10.17□□□□□ -0.78
SCARF1-203ENST00000434376 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
SCARF1-203ENST00000434376 TRBV7-6A0A0J9YX20 115 aa10.15□□□□□ -0.78
SCARF1-203ENST00000434376 M0R378 163 aa10.15□□□□□ -0.78
SCARF1-203ENST00000434376 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.78
SCARF1-203ENST00000434376 KRTAP1-5Q9BYS1 174 aa10.15□□□□□ -0.78
SCARF1-203ENST00000434376 LOC110117498A0A087WWA1 95 aa10.15□□□□□ -0.79
SCARF1-203ENST00000434376 CMYA5Q8N3K9 4069 aa10.14□□□□□ -0.79
SCARF1-203ENST00000434376 TMEM254Q8TBM7 123 aa10.13□□□□□ -0.79
SCARF1-203ENST00000434376 ETDCA0A1B0GVM5 59 aa10.12□□□□□ -0.79
SCARF1-203ENST00000434376 HIGD2AQ9BW72 106 aa10.12□□□□□ -0.79
SCARF1-203ENST00000434376 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
SCARF1-203ENST00000434376 SMIM26A0A096LP01 95 aa10.11□□□□□ -0.79
SCARF1-203ENST00000434376 KLKP1Q107X0 134 aa10.11□□□□□ -0.79
SCARF1-203ENST00000434376 PDE6GP18545 87 aa10.11□□□□□ -0.79
SCARF1-203ENST00000434376 PRLHP81277 87 aa10.11□□□□□ -0.79
SCARF1-203ENST00000434376 FP248Q71RG6 208 aaPredicted RBP10.1□□□□□ -0.79
SCARF1-203ENST00000434376 H3BNG1 76 aa10.1□□□□□ -0.79
SCARF1-203ENST00000434376 DNAH10OSP0CZ25 163 aa10.1□□□□□ -0.79
SCARF1-203ENST00000434376 CXCL6P80162 114 aa10.1□□□□□ -0.79
SCARF1-203ENST00000434376 FAM30AQ9NZY2 134 aa10.09□□□□□ -0.79
SCARF1-203ENST00000434376 PRR4Q16378 134 aa10.09□□□□□ -0.79
SCARF1-203ENST00000434376 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
SCARF1-203ENST00000434376 ELOF1P60002 83 aaKnown RBP10.07□□□□□ -0.8
SCARF1-203ENST00000434376 DEFB116Q30KQ4 102 aa10.07□□□□□ -0.8
SCARF1-203ENST00000434376 PRO0628Q9UI54 55 aa10.07□□□□□ -0.8
SCARF1-203ENST00000434376 ERC2-IT1O76042 136 aa10.06□□□□□ -0.8
SCARF1-203ENST00000434376 FAM229BQ4G0N7 80 aa10.05□□□□□ -0.8
SCARF1-203ENST00000434376 TRBV7-4A0A0J9YYF1 115 aa10.05□□□□□ -0.8
SCARF1-203ENST00000434376 MEGF8Q7Z7M0 2845 aa10.03□□□□□ -0.8
SCARF1-203ENST00000434376 LINC00528Q8N1L1 170 aa10.02□□□□□ -0.8
SCARF1-203ENST00000434376 PRYO14603 147 aa10.02□□□□□ -0.81
SCARF1-203ENST00000434376 MRPL55Q7Z7F7 128 aaKnown RBP10□□□□□ -0.81
SCARF1-203ENST00000434376 NDUFC1O43677 76 aa10□□□□□ -0.81
SCARF1-203ENST00000434376 PHF5AQ7RTV0 110 aaKnown RBP10□□□□□ -0.81
SCARF1-203ENST00000434376 SMIM29Q86T20 159 aa9.99□□□□□ -0.81
SCARF1-203ENST00000434376 IGKV4-1P06312 121 aa9.99□□□□□ -0.81
SCARF1-203ENST00000434376 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
SCARF1-203ENST00000434376 Q9BRP9 147 aa9.99□□□□□ -0.81
SCARF1-203ENST00000434376 BCE1O60756 84 aa9.97□□□□□ -0.81
SCARF1-203ENST00000434376 Q8N377 158 aa9.97□□□□□ -0.81
SCARF1-203ENST00000434376 DNAH7Q8WXX0 4024 aa9.96□□□□□ -0.81
SCARF1-203ENST00000434376 DNHD1Q96M86 4753 aa9.95□□□□□ -0.82
SCARF1-203ENST00000434376 H3BQ85 93 aa9.95□□□□□ -0.82
SCARF1-203ENST00000434376 DNAH9Q9NYC9 4486 aa9.93□□□□□ -0.82
SCARF1-203ENST00000434376 IGLV1-50A0A075B6I6 118 aa9.92□□□□□ -0.82
SCARF1-203ENST00000434376 Q6ZRX8 168 aa9.92□□□□□ -0.82
SCARF1-203ENST00000434376 EPM2AB3EWF7 344 aa9.92□□□□□ -0.82
SCARF1-203ENST00000434376 FBN3Q75N90 2809 aa9.91□□□□□ -0.82
SCARF1-203ENST00000434376 PSPHP1O15172 72 aa9.91□□□□□ -0.82
SCARF1-203ENST00000434376 KCNQ1DNQ9H478 68 aa9.91□□□□□ -0.82
SCARF1-203ENST00000434376 C1orf137Q5JT78 98 aa9.91□□□□□ -0.82
SCARF1-203ENST00000434376 REG3GQ6UW15 175 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms