RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SLPIP03973 132 aa5.48□□□□□ -1.53
VTI1A-202ENST00000432306 GIG44P09565 113 aaPredicted RBP5.48□□□□□ -1.53
VTI1A-202ENST00000432306 ENHOQ6UWT2 76 aa5.48□□□□□ -1.53
VTI1A-202ENST00000432306 NKAPP1Q8N9T2 125 aa5.48□□□□□ -1.53
VTI1A-202ENST00000432306 NOTCH3Q9UM47 2321 aa5.47□□□□□ -1.53
VTI1A-202ENST00000432306 NDUFC1O43677 76 aa5.47□□□□□ -1.53
VTI1A-202ENST00000432306 ATP5EP56381 51 aaPredicted RBP5.47□□□□□ -1.53
VTI1A-202ENST00000432306 DEFB136Q30KP8 78 aa5.47□□□□□ -1.53
VTI1A-202ENST00000432306 LINC00575Q6W349 94 aa5.47□□□□□ -1.53
VTI1A-202ENST00000432306 LINC00612Q8N6U2 182 aa5.47□□□□□ -1.53
VTI1A-202ENST00000432306 MPLKIPQ8TAP9 179 aa5.47□□□□□ -1.53
VTI1A-202ENST00000432306 TRBV7-6A0A0J9YX20 115 aa5.46□□□□□ -1.54
VTI1A-202ENST00000432306 KPRPQ5T749 579 aaPredicted RBP5.46□□□□□ -1.54
VTI1A-202ENST00000432306 NOP10Q9NPE3 64 aaKnown RBP5.46□□□□□ -1.54
VTI1A-202ENST00000432306 TRAV23DV6A0A075B6W5 121 aa5.45□□□□□ -1.54
VTI1A-202ENST00000432306 RBM3P98179 157 aaKnown RBP5.45□□□□□ -1.54
VTI1A-202ENST00000432306 C20orf197Q8N268 126 aa5.45□□□□□ -1.54
VTI1A-202ENST00000432306 CSNK1G2-AS1Q8NCQ2 148 aa5.45□□□□□ -1.54
VTI1A-202ENST00000432306 RYR3Q15413 4870 aa5.45□□□□□ -1.54
VTI1A-202ENST00000432306 ERC2-IT1O76042 136 aa5.45□□□□□ -1.54
VTI1A-202ENST00000432306 LINC01547P58512 204 aaPredicted RBP5.45□□□□□ -1.54
VTI1A-202ENST00000432306 TRGV2A0A075B6R0 118 aa5.44□□□□□ -1.54
VTI1A-202ENST00000432306 A8MUN3 132 aa5.44□□□□□ -1.54
VTI1A-202ENST00000432306 KRTAP10-3P60369 221 aa5.44□□□□□ -1.54
VTI1A-202ENST00000432306 TRGV4A0A0C4DH28 118 aa5.43□□□□□ -1.54
VTI1A-202ENST00000432306 LINC00313P59037 77 aa5.43□□□□□ -1.54
VTI1A-202ENST00000432306 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
VTI1A-202ENST00000432306 C16orf95Q9H693 158 aa5.43□□□□□ -1.54
VTI1A-202ENST00000432306 TRBV7-4A0A0J9YYF1 115 aa5.43□□□□□ -1.54
VTI1A-202ENST00000432306 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
VTI1A-202ENST00000432306 PRB2P02812 416 aaPredicted RBP5.43□□□□□ -1.54
VTI1A-202ENST00000432306 LINC01006Q8NI28 216 aa5.43□□□□□ -1.54
VTI1A-202ENST00000432306 TENM3Q9P273 2699 aa5.42□□□□□ -1.54
VTI1A-202ENST00000432306 A0A0J9YWU9 116 aa5.42□□□□□ -1.54
VTI1A-202ENST00000432306 WFDC9Q8NEX5 89 aa5.42□□□□□ -1.54
VTI1A-202ENST00000432306 FP248Q71RG6 208 aaPredicted RBP5.4□□□□□ -1.54
VTI1A-202ENST00000432306 SORL1Q92673 2214 aa5.4□□□□□ -1.55
VTI1A-202ENST00000432306 GVQW2A0A096LPI5 108 aaPredicted RBP5.4□□□□□ -1.55
VTI1A-202ENST00000432306 IGKV3OR2-268A0A0C4DH90 116 aa5.4□□□□□ -1.55
VTI1A-202ENST00000432306 REG3AQ06141 175 aa5.4□□□□□ -1.55
VTI1A-202ENST00000432306 C10orf25Q5T742 122 aa5.4□□□□□ -1.55
VTI1A-202ENST00000432306 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.4□□□□□ -1.55
VTI1A-202ENST00000432306 BRK1Q8WUW1 75 aa5.4□□□□□ -1.55
VTI1A-202ENST00000432306 IGLV1-51P01701 117 aa5.39□□□□□ -1.55
VTI1A-202ENST00000432306 LCA10Q71F78 164 aa5.39□□□□□ -1.55
VTI1A-202ENST00000432306 Q8NDZ9 215 aa5.39□□□□□ -1.55
VTI1A-202ENST00000432306 TRAV10A0A0B4J240 114 aa5.38□□□□□ -1.55
VTI1A-202ENST00000432306 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
VTI1A-202ENST00000432306 CELA1Q9UNI1 258 aa5.38□□□□□ -1.55
VTI1A-202ENST00000432306 ZNF706Q9Y5V0 76 aaPredicted RBP5.38□□□□□ -1.55
VTI1A-202ENST00000432306 M0R2N4 97 aa5.37□□□□□ -1.55
VTI1A-202ENST00000432306 ZNF73O43830 326 aaPredicted RBP5.37□□□□□ -1.55
VTI1A-202ENST00000432306 F8WEM9 126 aa5.37□□□□□ -1.55
VTI1A-202ENST00000432306 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
VTI1A-202ENST00000432306 PRO0255Q9UI72 69 aa5.37□□□□□ -1.55
VTI1A-202ENST00000432306 M0R378 163 aa5.36□□□□□ -1.55
VTI1A-202ENST00000432306 MIFP14174 115 aa5.36□□□□□ -1.55
VTI1A-202ENST00000432306 Q6ZRP5 223 aa5.36□□□□□ -1.55
VTI1A-202ENST00000432306 RMI2Q96E14 147 aa5.36□□□□□ -1.55
VTI1A-202ENST00000432306 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
VTI1A-202ENST00000432306 A0A1B0GW54 56 aa5.35□□□□□ -1.55
VTI1A-202ENST00000432306 CHTF8P0CG12 524 aa5.35□□□□□ -1.55
VTI1A-202ENST00000432306 HAMPP81172 84 aa5.35□□□□□ -1.55
VTI1A-202ENST00000432306 Q6ZQY7 126 aa5.35□□□□□ -1.55
VTI1A-202ENST00000432306 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
VTI1A-202ENST00000432306 DNAH3Q8TD57 4116 aa5.35□□□□□ -1.55
VTI1A-202ENST00000432306 COX7BP24311 80 aa5.34□□□□□ -1.55
VTI1A-202ENST00000432306 ELOF1P60002 83 aaKnown RBP5.34□□□□□ -1.55
VTI1A-202ENST00000432306 PRR4Q16378 134 aa5.34□□□□□ -1.55
VTI1A-202ENST00000432306 REG3GQ6UW15 175 aa5.34□□□□□ -1.55
VTI1A-202ENST00000432306 TMEM254Q8TBM7 123 aa5.34□□□□□ -1.55
VTI1A-202ENST00000432306 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
VTI1A-202ENST00000432306 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.56
VTI1A-202ENST00000432306 C3orf84H3BNL1 204 aa5.34□□□□□ -1.56
VTI1A-202ENST00000432306 NREPQ16612 68 aa5.34□□□□□ -1.56
VTI1A-202ENST00000432306 DIRC1Q969H9 104 aa5.34□□□□□ -1.56
VTI1A-202ENST00000432306 SNURFQ9Y675 71 aa5.34□□□□□ -1.56
VTI1A-202ENST00000432306 LCE6AA0A183 80 aa5.33□□□□□ -1.56
VTI1A-202ENST00000432306 K7EIL1 84 aa5.33□□□□□ -1.56
VTI1A-202ENST00000432306 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
VTI1A-202ENST00000432306 LINC00269Q8N2A0 174 aa5.33□□□□□ -1.56
VTI1A-202ENST00000432306 PRR34Q9NV39 138 aa5.33□□□□□ -1.56
VTI1A-202ENST00000432306 EGFEM1PQ0D2K5 195 aa5.32□□□□□ -1.56
VTI1A-202ENST00000432306 C9orf116Q5BN46 136 aaPredicted RBP5.32□□□□□ -1.56
VTI1A-202ENST00000432306 B9D2Q9BPU9 175 aa5.32□□□□□ -1.56
VTI1A-202ENST00000432306 BPY2O14599 106 aa5.31□□□□□ -1.56
VTI1A-202ENST00000432306 SPAG11BQ08648 103 aa5.31□□□□□ -1.56
VTI1A-202ENST00000432306 RPL37AP8A6NKH3 93 aa5.31□□□□□ -1.56
VTI1A-202ENST00000432306 IGKV4-1P06312 121 aa5.31□□□□□ -1.56
VTI1A-202ENST00000432306 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
VTI1A-202ENST00000432306 WFDC10AQ9H1F0 79 aa5.31□□□□□ -1.56
VTI1A-202ENST00000432306 DNAH9Q9NYC9 4486 aa5.31□□□□□ -1.56
VTI1A-202ENST00000432306 CASC10Q5T4H9 136 aa5.3□□□□□ -1.56
VTI1A-202ENST00000432306 UNQ6190/PRO20217Q6UXQ8 127 aa5.3□□□□□ -1.56
VTI1A-202ENST00000432306 SCXQ7RTU7 201 aa5.3□□□□□ -1.56
VTI1A-202ENST00000432306 DEFB130BP0DP73 79 aa5.29□□□□□ -1.56
VTI1A-202ENST00000432306 DEFB130AP0DP74 79 aa5.29□□□□□ -1.56
VTI1A-202ENST00000432306 CLPSL2Q6UWE3 100 aa5.29□□□□□ -1.56
VTI1A-202ENST00000432306 Q6ZTC4 211 aa5.29□□□□□ -1.56
VTI1A-202ENST00000432306 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms