RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 PLAC8Q9NZF1 115 aa2.92□□□□□ -1.94
LRRK2-204ENST00000430804 DSCAML1Q8TD84 2053 aa2.92□□□□□ -1.94
LRRK2-204ENST00000430804 A0A1B0GVX0 72 aa2.92□□□□□ -1.94
LRRK2-204ENST00000430804 PLXNB1O43157 2135 aa2.92□□□□□ -1.94
LRRK2-204ENST00000430804 AGRNO00468 2067 aa2.92□□□□□ -1.94
LRRK2-204ENST00000430804 KLK9Q2XQG4 91 aa2.92□□□□□ -1.94
LRRK2-204ENST00000430804 Q8N1X5 172 aa2.92□□□□□ -1.94
LRRK2-204ENST00000430804 PCP4P48539 62 aa2.91□□□□□ -1.94
LRRK2-204ENST00000430804 LITAFQ99732 161 aa2.91□□□□□ -1.94
LRRK2-204ENST00000430804 HELZ2Q9BYK8 2649 aaKnown RBP2.91□□□□□ -1.94
LRRK2-204ENST00000430804 FAM168BA1KXE4 195 aa2.91□□□□□ -1.94
LRRK2-204ENST00000430804 Q8N3U1 123 aa2.9□□□□□ -1.94
LRRK2-204ENST00000430804 SNURFQ9Y675 71 aa2.9□□□□□ -1.94
LRRK2-204ENST00000430804 C8orf17Q9NRJ1 99 aa2.9□□□□□ -1.94
LRRK2-204ENST00000430804 IGLV5-48A0A075B6I7 105 aa2.9□□□□□ -1.95
LRRK2-204ENST00000430804 A8MTW9 85 aa2.9□□□□□ -1.95
LRRK2-204ENST00000430804 C15orf56Q8N910 161 aa2.9□□□□□ -1.95
LRRK2-204ENST00000430804 A8MUN3 132 aa2.9□□□□□ -1.95
LRRK2-204ENST00000430804 WFDC2Q14508 124 aa2.89□□□□□ -1.95
LRRK2-204ENST00000430804 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
LRRK2-204ENST00000430804 MAST4O15021 2626 aa2.89□□□□□ -1.95
LRRK2-204ENST00000430804 IGLV5-45A0A087WSX0 123 aa2.88□□□□□ -1.95
LRRK2-204ENST00000430804 BAHCC1Q9P281 2608 aa2.88□□□□□ -1.95
LRRK2-204ENST00000430804 SETD2Q9BYW2 2564 aaPredicted RBP2.88□□□□□ -1.95
LRRK2-204ENST00000430804 K7EQZ3 153 aa2.88□□□□□ -1.95
LRRK2-204ENST00000430804 Q6ZQT0 140 aa2.88□□□□□ -1.95
LRRK2-204ENST00000430804 PRR15Q8IV56 129 aa2.88□□□□□ -1.95
LRRK2-204ENST00000430804 A0A1W2PNN7 141 aa2.87□□□□□ -1.95
LRRK2-204ENST00000430804 STAB1Q9NY15 2570 aa2.87□□□□□ -1.95
LRRK2-204ENST00000430804 SETXQ7Z333 2677 aaKnown RBP2.87□□□□□ -1.95
LRRK2-204ENST00000430804 S4R3F8 94 aa2.87□□□□□ -1.95
LRRK2-204ENST00000430804 ANAPC11Q9NYG5 84 aa2.87□□□□□ -1.95
LRRK2-204ENST00000430804 SMIM29Q86T20 159 aa2.86□□□□□ -1.95
LRRK2-204ENST00000430804 LINC01600Q96MT4 127 aa2.86□□□□□ -1.95
LRRK2-204ENST00000430804 R4GN34 69 aa2.86□□□□□ -1.95
LRRK2-204ENST00000430804 ADAMTSL4-AS1Q5T5F5 129 aa2.85□□□□□ -1.95
LRRK2-204ENST00000430804 TANC2Q9HCD6 1990 aa2.85□□□□□ -1.95
LRRK2-204ENST00000430804 C9orf129Q5T035 196 aaKnown RBP2.85□□□□□ -1.95
LRRK2-204ENST00000430804 KRTAP10-1P60331 282 aa2.85□□□□□ -1.95
LRRK2-204ENST00000430804 GAS8-AS1O95177 125 aa2.85□□□□□ -1.95
LRRK2-204ENST00000430804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.84□□□□□ -1.95
LRRK2-204ENST00000430804 LOC110117498A0A087WWA1 95 aa2.84□□□□□ -1.95
LRRK2-204ENST00000430804 LCA10Q71F78 164 aa2.83□□□□□ -1.96
LRRK2-204ENST00000430804 GIG44P09565 113 aaPredicted RBP2.83□□□□□ -1.96
LRRK2-204ENST00000430804 COL27A1Q8IZC6 1860 aaPredicted RBP2.83□□□□□ -1.96
LRRK2-204ENST00000430804 UQCR11O14957 56 aa2.83□□□□□ -1.96
LRRK2-204ENST00000430804 COX7CP15954 63 aa2.82□□□□□ -1.96
LRRK2-204ENST00000430804 ZCCHC13Q8WW36 166 aaKnown RBP2.82□□□□□ -1.96
LRRK2-204ENST00000430804 TSPEAR-AS2P59090 65 aa2.82□□□□□ -1.96
LRRK2-204ENST00000430804 RPS28P62857 69 aaKnown RBP2.82□□□□□ -1.96
LRRK2-204ENST00000430804 ATRQ13535 2644 aa2.81□□□□□ -1.96
LRRK2-204ENST00000430804 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
LRRK2-204ENST00000430804 FAM104AQ969W3 186 aa2.81□□□□□ -1.96
LRRK2-204ENST00000430804 USP24Q9UPU5 2620 aa2.81□□□□□ -1.96
LRRK2-204ENST00000430804 Q6ZR54 194 aa2.81□□□□□ -1.96
LRRK2-204ENST00000430804 CDC42SE1Q9NRR8 79 aa2.81□□□□□ -1.96
LRRK2-204ENST00000430804 A0A0D9SG42 100 aa2.8□□□□□ -1.96
LRRK2-204ENST00000430804 H7BZZ5 65 aa2.8□□□□□ -1.96
LRRK2-204ENST00000430804 KRTAP10-2P60368 255 aa2.8□□□□□ -1.96
LRRK2-204ENST00000430804 FAM218AQ96MZ4 157 aa2.8□□□□□ -1.96
LRRK2-204ENST00000430804 HCFC1P51610 2035 aa2.79□□□□□ -1.96
LRRK2-204ENST00000430804 LINC01546A6NGU7 62 aa2.78□□□□□ -1.96
LRRK2-204ENST00000430804 EP400Q96L91 3159 aa2.78□□□□□ -1.96
LRRK2-204ENST00000430804 PMAIP1Q13794 54 aa2.78□□□□□ -1.96
LRRK2-204ENST00000430804 SPINK7P58062 85 aa2.77□□□□□ -1.97
LRRK2-204ENST00000430804 PCSK5Q92824 1860 aa2.76□□□□□ -1.97
LRRK2-204ENST00000430804 RPS29P62273 56 aaKnown RBP2.76□□□□□ -1.97
LRRK2-204ENST00000430804 Q8N377 158 aa2.76□□□□□ -1.97
LRRK2-204ENST00000430804 SRCAPQ6ZRS2 3230 aa2.76□□□□□ -1.97
LRRK2-204ENST00000430804 A0A087WVE0 104 aa2.75□□□□□ -1.97
LRRK2-204ENST00000430804 PSPHP1O15172 72 aa2.75□□□□□ -1.97
LRRK2-204ENST00000430804 A0A1W2PNM2 257 aa2.75□□□□□ -1.97
LRRK2-204ENST00000430804 MIR22HGQ0VDD5 57 aa2.75□□□□□ -1.97
LRRK2-204ENST00000430804 M0QZ58 72 aa2.74□□□□□ -1.97
LRRK2-204ENST00000430804 C20orf166-AS1Q96NR2 134 aa2.74□□□□□ -1.97
LRRK2-204ENST00000430804 C1orf195Q5TG92 126 aa2.74□□□□□ -1.97
LRRK2-204ENST00000430804 NOTCH1P46531 2555 aa2.73□□□□□ -1.97
LRRK2-204ENST00000430804 C4orf26Q17RF5 130 aa2.73□□□□□ -1.97
LRRK2-204ENST00000430804 COA5Q86WW8 74 aa2.73□□□□□ -1.97
LRRK2-204ENST00000430804 YPEL4Q96NS1 127 aa2.73□□□□□ -1.97
LRRK2-204ENST00000430804 DMAC1Q96GE9 116 aa2.73□□□□□ -1.97
LRRK2-204ENST00000430804 LOC105371267A0A1B0GV96 52 aa2.72□□□□□ -1.97
LRRK2-204ENST00000430804 A0A1B0GU33 70 aa2.71□□□□□ -1.98
LRRK2-204ENST00000430804 H1FX-AS1Q4G0G2 97 aa2.71□□□□□ -1.98
LRRK2-204ENST00000430804 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.98
LRRK2-204ENST00000430804 CYP4F30PQ9H0H9 118 aa2.7□□□□□ -1.98
LRRK2-204ENST00000430804 DMBT1Q9UGM3 2413 aaPredicted RBP2.7□□□□□ -1.98
LRRK2-204ENST00000430804 PRO2289Q9P1D8 64 aa2.7□□□□□ -1.98
LRRK2-204ENST00000430804 ITPR3Q14573 2671 aa2.7□□□□□ -1.98
LRRK2-204ENST00000430804 GOLGB1Q14789 3259 aaKnown RBP2.69□□□□□ -1.98
LRRK2-204ENST00000430804 CCDC179H3BU77 68 aa2.69□□□□□ -1.98
LRRK2-204ENST00000430804 FLNAP21333 2647 aaKnown RBP2.69□□□□□ -1.98
LRRK2-204ENST00000430804 A0A096LNJ9 63 aa2.69□□□□□ -1.98
LRRK2-204ENST00000430804 SPRR1BP22528 89 aa2.69□□□□□ -1.98
LRRK2-204ENST00000430804 PANO1I0J062 215 aa2.68□□□□□ -1.98
LRRK2-204ENST00000430804 URB1-AS1Q96HZ7 61 aa2.68□□□□□ -1.98
LRRK2-204ENST00000430804 KRTAP1-5Q9BYS1 174 aa2.68□□□□□ -1.98
LRRK2-204ENST00000430804 KRTAP29-1A8MX34 341 aaPredicted RBP2.68□□□□□ -1.98
LRRK2-204ENST00000430804 Q1T7F1 81 aa2.67□□□□□ -1.98
LRRK2-204ENST00000430804 TEP1Q99973 2627 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms