RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.47
GABPB1-205ENST00000429662 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.47
GABPB1-205ENST00000429662 CASC10Q5T4H9 136 aa5.9□□□□□ -1.47
GABPB1-205ENST00000429662 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.47
GABPB1-205ENST00000429662 SERP2Q8N6R1 65 aa5.9□□□□□ -1.47
GABPB1-205ENST00000429662 UBL5Q9BZL1 73 aa5.9□□□□□ -1.47
GABPB1-205ENST00000429662 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 LOC110117498A0A087WWA1 95 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 TRBV7-6A0A0J9YX20 115 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 H3BNG1 76 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 IGLV6-57P01721 117 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
GABPB1-205ENST00000429662 DEFB135Q30KP9 77 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 C6orf99Q4VX62 202 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 Q8NAQ8 132 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 C2orf48Q96LS8 159 aa5.89□□□□□ -1.47
GABPB1-205ENST00000429662 IGKV3D-7A0A0C4DH55 119 aa5.88□□□□□ -1.47
GABPB1-205ENST00000429662 F8WDY8 70 aa5.88□□□□□ -1.47
GABPB1-205ENST00000429662 C6orf223Q8N319 242 aa5.88□□□□□ -1.47
GABPB1-205ENST00000429662 B9D2Q9BPU9 175 aa5.88□□□□□ -1.47
GABPB1-205ENST00000429662 IGLV10-54A0A075B6I4 117 aa5.87□□□□□ -1.47
GABPB1-205ENST00000429662 C3orf84H3BNL1 204 aa5.87□□□□□ -1.47
GABPB1-205ENST00000429662 KRTAP10-11P60412 298 aa5.87□□□□□ -1.47
GABPB1-205ENST00000429662 PRR3P79522 188 aaKnown RBP5.87□□□□□ -1.47
GABPB1-205ENST00000429662 WFDC9Q8NEX5 89 aa5.87□□□□□ -1.47
GABPB1-205ENST00000429662 USP17L23D6RBM5 183 aa5.86□□□□□ -1.47
GABPB1-205ENST00000429662 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
GABPB1-205ENST00000429662 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
GABPB1-205ENST00000429662 UNQ6190/PRO20217Q6UXQ8 127 aa5.86□□□□□ -1.47
GABPB1-205ENST00000429662 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.86□□□□□ -1.47
GABPB1-205ENST00000429662 SMIM20Q8N5G0 67 aa5.86□□□□□ -1.47
GABPB1-205ENST00000429662 KMT2AQ03164 3969 aa5.86□□□□□ -1.47
GABPB1-205ENST00000429662 C9orf116Q5BN46 136 aaPredicted RBP5.85□□□□□ -1.47
GABPB1-205ENST00000429662 Q6ZQT0 140 aa5.85□□□□□ -1.47
GABPB1-205ENST00000429662 DIRC1Q969H9 104 aa5.85□□□□□ -1.47
GABPB1-205ENST00000429662 DSCR8Q96T75 97 aa5.85□□□□□ -1.47
GABPB1-205ENST00000429662 KLK12Q9UKR0 248 aa5.85□□□□□ -1.47
GABPB1-205ENST00000429662 HERC1Q15751 4861 aa5.85□□□□□ -1.47
GABPB1-205ENST00000429662 TRAV23DV6A0A075B6W5 121 aa5.84□□□□□ -1.47
GABPB1-205ENST00000429662 TMEM258P61165 79 aa5.84□□□□□ -1.47
GABPB1-205ENST00000429662 ENHOQ6UWT2 76 aa5.84□□□□□ -1.47
GABPB1-205ENST00000429662 LAMTOR3Q9UHA4 124 aa5.84□□□□□ -1.47
GABPB1-205ENST00000429662 CELA1Q9UNI1 258 aa5.84□□□□□ -1.47
GABPB1-205ENST00000429662 PKHD1P08F94 4074 aa5.83□□□□□ -1.48
GABPB1-205ENST00000429662 NDUFC2-KCTD14E9PQ53 114 aa5.83□□□□□ -1.48
GABPB1-205ENST00000429662 DEFB4AO15263 64 aa5.83□□□□□ -1.48
GABPB1-205ENST00000429662 COX7BP24311 80 aa5.83□□□□□ -1.48
GABPB1-205ENST00000429662 EGFEM1PQ0D2K5 195 aa5.83□□□□□ -1.48
GABPB1-205ENST00000429662 C10orf25Q5T742 122 aa5.83□□□□□ -1.48
GABPB1-205ENST00000429662 J3KT08 172 aa5.82□□□□□ -1.48
GABPB1-205ENST00000429662 M0R378 163 aa5.82□□□□□ -1.48
GABPB1-205ENST00000429662 HTN3P15516 51 aa5.82□□□□□ -1.48
GABPB1-205ENST00000429662 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
GABPB1-205ENST00000429662 C6orf48Q9UBA6 75 aa5.82□□□□□ -1.48
GABPB1-205ENST00000429662 ZNF73O43830 326 aaPredicted RBP5.81□□□□□ -1.48
GABPB1-205ENST00000429662 CXCL6P80162 114 aa5.81□□□□□ -1.48
GABPB1-205ENST00000429662 Q8NDZ9 215 aa5.81□□□□□ -1.48
GABPB1-205ENST00000429662 UPK3BQ9BT76 320 aa5.81□□□□□ -1.48
GABPB1-205ENST00000429662 A0A087WVE0 104 aa5.8□□□□□ -1.48
GABPB1-205ENST00000429662 ELOF1P60002 83 aaKnown RBP5.8□□□□□ -1.48
GABPB1-205ENST00000429662 CAMK2N2Q96S95 79 aa5.8□□□□□ -1.48
GABPB1-205ENST00000429662 Q6ZQY7 126 aa5.8□□□□□ -1.48
GABPB1-205ENST00000429662 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
GABPB1-205ENST00000429662 LOC107984640A0A0U1RRK4 108 aa5.79□□□□□ -1.48
GABPB1-205ENST00000429662 VPREB1P12018 145 aa5.79□□□□□ -1.48
GABPB1-205ENST00000429662 TRAV7A0A075B6U4 112 aa5.78□□□□□ -1.48
GABPB1-205ENST00000429662 TRBV7-4A0A0J9YYF1 115 aa5.78□□□□□ -1.48
GABPB1-205ENST00000429662 Q6ZVQ6 151 aa5.78□□□□□ -1.48
GABPB1-205ENST00000429662 VPS13DQ5THJ4 4388 aa5.77□□□□□ -1.48
GABPB1-205ENST00000429662 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
GABPB1-205ENST00000429662 KRTAP26-1Q6PEX3 210 aa5.77□□□□□ -1.49
GABPB1-205ENST00000429662 FAM19A1Q7Z5A9 133 aa5.77□□□□□ -1.49
GABPB1-205ENST00000429662 DYNC1H1Q14204 4646 aaKnown RBP5.77□□□□□ -1.49
GABPB1-205ENST00000429662 FAT2Q9NYQ8 4349 aa5.76□□□□□ -1.49
GABPB1-205ENST00000429662 A0A1B0GW54 56 aa5.76□□□□□ -1.49
GABPB1-205ENST00000429662 LINC01556Q5JQF7 62 aa5.76□□□□□ -1.49
GABPB1-205ENST00000429662 C1orf43Q9BWL3 253 aa5.76□□□□□ -1.49
GABPB1-205ENST00000429662 XAGE1AQ9HD64 81 aa5.76□□□□□ -1.49
GABPB1-205ENST00000429662 HAMPP81172 84 aa5.75□□□□□ -1.49
GABPB1-205ENST00000429662 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
GABPB1-205ENST00000429662 Q6ZRU5 148 aa5.74□□□□□ -1.49
GABPB1-205ENST00000429662 WFDC10BQ8IUB3 73 aa5.74□□□□□ -1.49
GABPB1-205ENST00000429662 C15orf56Q8N910 161 aa5.74□□□□□ -1.49
GABPB1-205ENST00000429662 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
GABPB1-205ENST00000429662 PLA2G2DQ9UNK4 145 aa5.74□□□□□ -1.49
GABPB1-205ENST00000429662 DNAH2Q9P225 4427 aa5.74□□□□□ -1.49
GABPB1-205ENST00000429662 TLX1NBP0CAT3 122 aa5.73□□□□□ -1.49
GABPB1-205ENST00000429662 SYCNQ0VAF6 134 aa5.73□□□□□ -1.49
GABPB1-205ENST00000429662 HIGD2BQ4VC39 106 aa5.73□□□□□ -1.49
GABPB1-205ENST00000429662 NDUFC1O43677 76 aa5.72□□□□□ -1.49
GABPB1-205ENST00000429662 ESRGQ1W209 222 aa5.72□□□□□ -1.49
GABPB1-205ENST00000429662 KCNQ1DNQ9H478 68 aa5.72□□□□□ -1.49
GABPB1-205ENST00000429662 HSPG2P98160 4391 aa5.71□□□□□ -1.49
GABPB1-205ENST00000429662 Q6ZTC4 211 aa5.71□□□□□ -1.5
GABPB1-205ENST00000429662 NKAPP1Q8N9T2 125 aa5.71□□□□□ -1.5
GABPB1-205ENST00000429662 DHRS4-AS1Q9P1J3 65 aa5.71□□□□□ -1.5
GABPB1-205ENST00000429662 DNAH11Q96DT5 4516 aa5.7□□□□□ -1.5
GABPB1-205ENST00000429662 IGLV5-37A0A075B6J1 123 aa5.7□□□□□ -1.5
GABPB1-205ENST00000429662 IGKV2D-24A0A075B6R9 120 aa5.7□□□□□ -1.5
GABPB1-205ENST00000429662 H3BS24 57 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms