RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 H3BPC8 53 aa5.88□□□□□ -1.47
CDC42BPA-206ENST00000429440 DSCR9P59020 149 aa5.88□□□□□ -1.47
CDC42BPA-206ENST00000429440 A0A087X002 238 aa5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 TRGV1A0A0A0MS02 117 aa5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 INSP01308 110 aa5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 PRB2P02812 416 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 KRTAP10-9P60411 292 aa5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 PLAC8Q9NZF1 115 aa5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 TLN2Q9Y4G6 2542 aa5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 NF1P21359 2839 aa5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
CDC42BPA-206ENST00000429440 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-206ENST00000429440 CASC2Q6XLA1 102 aa5.86□□□□□ -1.47
CDC42BPA-206ENST00000429440 WFDC10AQ9H1F0 79 aa5.86□□□□□ -1.47
CDC42BPA-206ENST00000429440 ITPR3Q14573 2671 aa5.86□□□□□ -1.47
CDC42BPA-206ENST00000429440 DEFB131AP59861 70 aa5.86□□□□□ -1.47
CDC42BPA-206ENST00000429440 FLNBO75369 2602 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-206ENST00000429440 TENM4Q6N022 2769 aa5.85□□□□□ -1.47
CDC42BPA-206ENST00000429440 SERTAD4-AS1Q5TG53 156 aa5.85□□□□□ -1.47
CDC42BPA-206ENST00000429440 ZNF702PQ9H963 129 aa5.85□□□□□ -1.47
CDC42BPA-206ENST00000429440 MAST4O15021 2626 aa5.84□□□□□ -1.47
CDC42BPA-206ENST00000429440 WNK1Q9H4A3 2382 aa5.84□□□□□ -1.47
CDC42BPA-206ENST00000429440 C2CD3Q4AC94 2353 aa5.84□□□□□ -1.47
CDC42BPA-206ENST00000429440 DSCR10P59022 87 aa5.84□□□□□ -1.47
CDC42BPA-206ENST00000429440 Q6YL49 198 aa5.84□□□□□ -1.47
CDC42BPA-206ENST00000429440 IGLV5-48A0A075B6I7 105 aa5.83□□□□□ -1.48
CDC42BPA-206ENST00000429440 CNBPP62633 177 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-206ENST00000429440 SONP18583 2426 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-206ENST00000429440 A0A1B0GUV1 79 aa5.83□□□□□ -1.48
CDC42BPA-206ENST00000429440 KRTAP1-3Q8IUG1 177 aa5.83□□□□□ -1.48
CDC42BPA-206ENST00000429440 ANK3Q12955 4377 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-206ENST00000429440 NIPBLQ6KC79 2804 aaeCLIP5.83□□□□□ -1.48
CDC42BPA-206ENST00000429440 ODF3L2Q3SX64 289 aa5.82□□□□□ -1.48
CDC42BPA-206ENST00000429440 C18orf65Q6ZTR6 163 aa5.82□□□□□ -1.48
CDC42BPA-206ENST00000429440 COA5Q86WW8 74 aa5.82□□□□□ -1.48
CDC42BPA-206ENST00000429440 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
CDC42BPA-206ENST00000429440 GCN1Q92616 2671 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-206ENST00000429440 SPAG11BQ08648 103 aa5.81□□□□□ -1.48
CDC42BPA-206ENST00000429440 FLNAP21333 2647 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-206ENST00000429440 A0A0J9YWU9 116 aa5.81□□□□□ -1.48
CDC42BPA-206ENST00000429440 KPRPQ5T749 579 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-206ENST00000429440 LINC00528Q8N1L1 170 aa5.81□□□□□ -1.48
CDC42BPA-206ENST00000429440 PDZD2O15018 2839 aa5.8□□□□□ -1.48
CDC42BPA-206ENST00000429440 C9orf163Q8N9P6 203 aa5.8□□□□□ -1.48
CDC42BPA-206ENST00000429440 K7EQZ3 153 aa5.8□□□□□ -1.48
CDC42BPA-206ENST00000429440 DEFB136Q30KP8 78 aa5.8□□□□□ -1.48
CDC42BPA-206ENST00000429440 CCDC168Q8NDH2 2452 aa5.79□□□□□ -1.48
CDC42BPA-206ENST00000429440 DEFB113Q30KQ7 82 aa5.79□□□□□ -1.48
CDC42BPA-206ENST00000429440 SLURP1P55000 103 aa5.79□□□□□ -1.48
CDC42BPA-206ENST00000429440 SPINK7P58062 85 aa5.79□□□□□ -1.48
CDC42BPA-206ENST00000429440 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
CDC42BPA-206ENST00000429440 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
CDC42BPA-206ENST00000429440 ITPR2Q14571 2701 aa5.78□□□□□ -1.48
CDC42BPA-206ENST00000429440 A0A1W2PNM2 257 aa5.77□□□□□ -1.49
CDC42BPA-206ENST00000429440 MAP6D1Q9H9H5 199 aa5.77□□□□□ -1.49
CDC42BPA-206ENST00000429440 SETD2Q9BYW2 2564 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-206ENST00000429440 IGKV2D-24A0A075B6R9 120 aa5.77□□□□□ -1.49
CDC42BPA-206ENST00000429440 Q8NBF4 154 aa5.77□□□□□ -1.49
CDC42BPA-206ENST00000429440 GVQW2A0A096LPI5 108 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-206ENST00000429440 ACANP16112 2415 aa5.76□□□□□ -1.49
CDC42BPA-206ENST00000429440 H0Y9P7 68 aa5.76□□□□□ -1.49
CDC42BPA-206ENST00000429440 Q8NAQ8 132 aa5.76□□□□□ -1.49
CDC42BPA-206ENST00000429440 NOP10Q9NPE3 64 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-206ENST00000429440 UNQ6190/PRO20217Q6UXQ8 127 aa5.75□□□□□ -1.49
CDC42BPA-206ENST00000429440 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
CDC42BPA-206ENST00000429440 Q8N377 158 aa5.74□□□□□ -1.49
CDC42BPA-206ENST00000429440 MTORP42345 2549 aa5.74□□□□□ -1.49
CDC42BPA-206ENST00000429440 H0Y9J4 135 aa5.74□□□□□ -1.49
CDC42BPA-206ENST00000429440 ADM2Q7Z4H4 148 aa5.74□□□□□ -1.49
CDC42BPA-206ENST00000429440 C4orf3Q8WVX3 66 aa5.74□□□□□ -1.49
CDC42BPA-206ENST00000429440 CHCHD10Q8WYQ3 142 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-206ENST00000429440 JMJD1CQ15652 2540 aa5.73□□□□□ -1.49
CDC42BPA-206ENST00000429440 HELZ2Q9BYK8 2649 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-206ENST00000429440 RTL8CO15255 209 aa5.73□□□□□ -1.49
CDC42BPA-206ENST00000429440 TNP2Q05952 138 aa5.73□□□□□ -1.49
CDC42BPA-206ENST00000429440 C1orf137Q5JT78 98 aa5.72□□□□□ -1.49
CDC42BPA-206ENST00000429440 LINC00476Q8WZB0 136 aa5.72□□□□□ -1.49
CDC42BPA-206ENST00000429440 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-206ENST00000429440 KRTAP1-1Q07627 177 aa5.72□□□□□ -1.49
CDC42BPA-206ENST00000429440 C16orf74Q96GX8 76 aa5.72□□□□□ -1.49
CDC42BPA-206ENST00000429440 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
CDC42BPA-206ENST00000429440 CLPSL2Q6UWE3 100 aa5.71□□□□□ -1.5
CDC42BPA-206ENST00000429440 DNAJC9-AS1A6NH13 148 aa5.71□□□□□ -1.5
CDC42BPA-206ENST00000429440 WFDC13Q8IUB5 93 aa5.69□□□□□ -1.5
CDC42BPA-206ENST00000429440 NOTCH3Q9UM47 2321 aa5.68□□□□□ -1.5
CDC42BPA-206ENST00000429440 XAGE1AQ9HD64 81 aa5.68□□□□□ -1.5
CDC42BPA-206ENST00000429440 REG3AQ06141 175 aa5.68□□□□□ -1.5
CDC42BPA-206ENST00000429440 DEFB105AQ8NG35 78 aa5.67□□□□□ -1.5
CDC42BPA-206ENST00000429440 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
CDC42BPA-206ENST00000429440 DEFB116Q30KQ4 102 aa5.67□□□□□ -1.5
CDC42BPA-206ENST00000429440 C6orf48Q9UBA6 75 aa5.67□□□□□ -1.5
CDC42BPA-206ENST00000429440 IGLV10-54A0A075B6I4 117 aa5.66□□□□□ -1.5
CDC42BPA-206ENST00000429440 IGLV1-51P01701 117 aa5.66□□□□□ -1.5
CDC42BPA-206ENST00000429440 WFDC10BQ8IUB3 73 aa5.66□□□□□ -1.5
CDC42BPA-206ENST00000429440 C7orf33Q8WU49 177 aa5.66□□□□□ -1.5
CDC42BPA-206ENST00000429440 VWFP04275 2813 aa5.66□□□□□ -1.5
CDC42BPA-206ENST00000429440 IGLV5-37A0A075B6J1 123 aa5.66□□□□□ -1.5
CDC42BPA-206ENST00000429440 CSNK1G2-AS1Q8NCQ2 148 aa5.66□□□□□ -1.5
CDC42BPA-206ENST00000429440 DHRS4-AS1Q9P1J3 65 aa5.66□□□□□ -1.5
CDC42BPA-206ENST00000429440 GIG44P09565 113 aaPredicted RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms