RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 A0A0G2JQZ4 141 aa8.31□□□□□ -1.08
CDH3-202ENST00000429102 A0A1W2PNN7 141 aa8.31□□□□□ -1.08
CDH3-202ENST00000429102 FAM30AQ9NZY2 134 aa8.3□□□□□ -1.08
CDH3-202ENST00000429102 MIFP14174 115 aa8.29□□□□□ -1.08
CDH3-202ENST00000429102 ATP5EP2Q5VTU8 51 aa8.29□□□□□ -1.08
CDH3-202ENST00000429102 DEFB116Q30KQ4 102 aa8.29□□□□□ -1.08
CDH3-202ENST00000429102 SRRM2Q9UQ35 2752 aaKnown RBP8.29□□□□□ -1.08
CDH3-202ENST00000429102 Q6ZRP5 223 aa8.29□□□□□ -1.08
CDH3-202ENST00000429102 TRAV7A0A075B6U4 112 aa8.28□□□□□ -1.08
CDH3-202ENST00000429102 A0A0J9YWU9 116 aa8.28□□□□□ -1.08
CDH3-202ENST00000429102 ESRGQ1W209 222 aa8.28□□□□□ -1.08
CDH3-202ENST00000429102 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
CDH3-202ENST00000429102 TENM2Q9NT68 2774 aa8.27□□□□□ -1.09
CDH3-202ENST00000429102 VPREB1P12018 145 aa8.26□□□□□ -1.09
CDH3-202ENST00000429102 SERTAD4-AS1Q5TG53 156 aa8.25□□□□□ -1.09
CDH3-202ENST00000429102 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
CDH3-202ENST00000429102 H7BZZ5 65 aa8.24□□□□□ -1.09
CDH3-202ENST00000429102 RPS28P62857 69 aaKnown RBP8.24□□□□□ -1.09
CDH3-202ENST00000429102 ST20-AS1Q8NBB2 130 aa8.24□□□□□ -1.09
CDH3-202ENST00000429102 A0A096LNI7 61 aa8.24□□□□□ -1.09
CDH3-202ENST00000429102 UBE2BP63146 152 aa8.24□□□□□ -1.09
CDH3-202ENST00000429102 LINC00336Q6ZUF6 198 aa8.24□□□□□ -1.09
CDH3-202ENST00000429102 HIGD2AQ9BW72 106 aa8.24□□□□□ -1.09
CDH3-202ENST00000429102 M0R378 163 aa8.24□□□□□ -1.09
CDH3-202ENST00000429102 ELOF1P60002 83 aaKnown RBP8.23□□□□□ -1.09
CDH3-202ENST00000429102 SYCNQ0VAF6 134 aa8.23□□□□□ -1.09
CDH3-202ENST00000429102 CASC10Q5T4H9 136 aa8.23□□□□□ -1.09
CDH3-202ENST00000429102 LOC110117498A0A087WWA1 95 aa8.23□□□□□ -1.09
CDH3-202ENST00000429102 DEFB131BA0A096LNP1 70 aa8.23□□□□□ -1.09
CDH3-202ENST00000429102 NDUFC2-KCTD14E9PQ53 114 aa8.22□□□□□ -1.09
CDH3-202ENST00000429102 C15orf56Q8N910 161 aa8.22□□□□□ -1.09
CDH3-202ENST00000429102 TRBV7-6A0A0J9YX20 115 aa8.22□□□□□ -1.09
CDH3-202ENST00000429102 TMEM254Q8TBM7 123 aa8.22□□□□□ -1.09
CDH3-202ENST00000429102 Q5XG85 94 aa8.22□□□□□ -1.09
CDH3-202ENST00000429102 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
CDH3-202ENST00000429102 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
CDH3-202ENST00000429102 STAB2Q8WWQ8 2551 aa8.2□□□□□ -1.1
CDH3-202ENST00000429102 ETDCA0A1B0GVM5 59 aa8.2□□□□□ -1.1
CDH3-202ENST00000429102 C7orf33Q8WU49 177 aa8.2□□□□□ -1.1
CDH3-202ENST00000429102 COL7A1Q02388 2944 aa8.2□□□□□ -1.1
CDH3-202ENST00000429102 EGFEM1PQ0D2K5 195 aa8.2□□□□□ -1.1
CDH3-202ENST00000429102 TRBV7-4A0A0J9YYF1 115 aa8.19□□□□□ -1.1
CDH3-202ENST00000429102 FUSP35637 526 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDH3-202ENST00000429102 WFDC13Q8IUB5 93 aa8.18□□□□□ -1.1
CDH3-202ENST00000429102 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
CDH3-202ENST00000429102 PDE6GP18545 87 aa8.18□□□□□ -1.1
CDH3-202ENST00000429102 KRTAP10-11P60412 298 aa8.18□□□□□ -1.1
CDH3-202ENST00000429102 C11orf45Q8TAV5 145 aa8.17□□□□□ -1.1
CDH3-202ENST00000429102 SMIM29Q86T20 159 aa8.17□□□□□ -1.1
CDH3-202ENST00000429102 ANK2Q01484 3957 aa8.16□□□□□ -1.1
CDH3-202ENST00000429102 CXCL6P80162 114 aa8.16□□□□□ -1.1
CDH3-202ENST00000429102 Q8N377 158 aa8.16□□□□□ -1.1
CDH3-202ENST00000429102 SMIM26A0A096LP01 95 aa8.15□□□□□ -1.11
CDH3-202ENST00000429102 ERC2-IT1O76042 136 aa8.15□□□□□ -1.11
CDH3-202ENST00000429102 PSPHP1O15172 72 aa8.14□□□□□ -1.11
CDH3-202ENST00000429102 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
CDH3-202ENST00000429102 GVQW2A0A096LPI5 108 aaPredicted RBP8.14□□□□□ -1.11
CDH3-202ENST00000429102 PRYO14603 147 aa8.13□□□□□ -1.11
CDH3-202ENST00000429102 FAM229BQ4G0N7 80 aa8.13□□□□□ -1.11
CDH3-202ENST00000429102 C1orf137Q5JT78 98 aa8.13□□□□□ -1.11
CDH3-202ENST00000429102 IGKV4-1P06312 121 aa8.12□□□□□ -1.11
CDH3-202ENST00000429102 PRLHP81277 87 aa8.11□□□□□ -1.11
CDH3-202ENST00000429102 KRTAP26-1Q6PEX3 210 aa8.11□□□□□ -1.11
CDH3-202ENST00000429102 KLKP1Q107X0 134 aa8.1□□□□□ -1.11
CDH3-202ENST00000429102 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
CDH3-202ENST00000429102 Q9BRP9 147 aa8.1□□□□□ -1.11
CDH3-202ENST00000429102 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
CDH3-202ENST00000429102 RPL37AP61513 92 aaKnown RBP8.07□□□□□ -1.12
CDH3-202ENST00000429102 K7EQZ3 153 aa8.07□□□□□ -1.12
CDH3-202ENST00000429102 PSCAO43653 123 aa8.05□□□□□ -1.12
CDH3-202ENST00000429102 LINC00588Q9Y4M8 146 aa8.05□□□□□ -1.12
CDH3-202ENST00000429102 PRO0628Q9UI54 55 aa8.05□□□□□ -1.12
CDH3-202ENST00000429102 Q6ZRX8 168 aa8.04□□□□□ -1.12
CDH3-202ENST00000429102 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
CDH3-202ENST00000429102 KCNQ1DNQ9H478 68 aa8.04□□□□□ -1.12
CDH3-202ENST00000429102 H3BQ85 93 aa8.03□□□□□ -1.12
CDH3-202ENST00000429102 NDUFC1O43677 76 aa8.03□□□□□ -1.12
CDH3-202ENST00000429102 A0A087WSZ3 146 aa8.03□□□□□ -1.12
CDH3-202ENST00000429102 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
CDH3-202ENST00000429102 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
CDH3-202ENST00000429102 OCR1Q9BZK8 76 aa8.02□□□□□ -1.13
CDH3-202ENST00000429102 LINC00208Q96KT6 92 aa8.02□□□□□ -1.13
CDH3-202ENST00000429102 EPM2AB3EWF7 344 aa8.01□□□□□ -1.13
CDH3-202ENST00000429102 IGLV1-50A0A075B6I6 118 aa8□□□□□ -1.13
CDH3-202ENST00000429102 C1orf195Q5TG92 126 aa8□□□□□ -1.13
CDH3-202ENST00000429102 KRTAP7-1Q8IUC3 87 aa8□□□□□ -1.13
CDH3-202ENST00000429102 DHRS4-AS1Q9P1J3 65 aa8□□□□□ -1.13
CDH3-202ENST00000429102 LINC00476Q8WZB0 136 aa7.99□□□□□ -1.13
CDH3-202ENST00000429102 H0Y9J4 135 aa7.99□□□□□ -1.13
CDH3-202ENST00000429102 KRTAP24-1Q3LI83 254 aa7.99□□□□□ -1.13
CDH3-202ENST00000429102 DNAH10Q8IVF4 4471 aa7.98□□□□□ -1.13
CDH3-202ENST00000429102 LYSTQ99698 3801 aa7.98□□□□□ -1.13
CDH3-202ENST00000429102 Q8NBF4 154 aa7.98□□□□□ -1.13
CDH3-202ENST00000429102 SPTSSBQ8NFR3 76 aa7.98□□□□□ -1.13
CDH3-202ENST00000429102 REG3GQ6UW15 175 aa7.97□□□□□ -1.13
CDH3-202ENST00000429102 DSCR10P59022 87 aa7.97□□□□□ -1.13
CDH3-202ENST00000429102 UBE2DNLQ8IWF7 75 aa7.96□□□□□ -1.14
CDH3-202ENST00000429102 NDUFS5O43920 106 aa7.96□□□□□ -1.14
CDH3-202ENST00000429102 UBE2AP49459 152 aa7.96□□□□□ -1.14
CDH3-202ENST00000429102 IGLV5-48A0A075B6I7 105 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms