RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 Q6ZVQ6 151 aa7.72□□□□□ -1.17
CECR3-201ENST00000428828 TMEM254Q8TBM7 123 aa7.72□□□□□ -1.17
CECR3-201ENST00000428828 ZNF561-AS1K7EIQ3 104 aa7.72□□□□□ -1.17
CECR3-201ENST00000428828 STARD9Q9P2P6 4700 aa7.71□□□□□ -1.17
CECR3-201ENST00000428828 CD164Q04900 197 aa7.71□□□□□ -1.18
CECR3-201ENST00000428828 Q8N3U1 123 aa7.7□□□□□ -1.18
CECR3-201ENST00000428828 NREPQ16612 68 aa7.69□□□□□ -1.18
CECR3-201ENST00000428828 Q1T7F1 81 aa7.69□□□□□ -1.18
CECR3-201ENST00000428828 H3BNG1 76 aa7.68□□□□□ -1.18
CECR3-201ENST00000428828 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
CECR3-201ENST00000428828 NTM-AS1Q6ZSK4 140 aa7.68□□□□□ -1.18
CECR3-201ENST00000428828 DYNC2H1Q8NCM8 4307 aaKnown RBP7.68□□□□□ -1.18
CECR3-201ENST00000428828 PRYO14603 147 aa7.68□□□□□ -1.18
CECR3-201ENST00000428828 HAMPP81172 84 aa7.67□□□□□ -1.18
CECR3-201ENST00000428828 LYSTQ99698 3801 aa7.67□□□□□ -1.18
CECR3-201ENST00000428828 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
CECR3-201ENST00000428828 A0A087WZ39 114 aa7.66□□□□□ -1.18
CECR3-201ENST00000428828 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
CECR3-201ENST00000428828 FUSP35637 526 aaKnown RBP eCLIP7.66□□□□□ -1.18
CECR3-201ENST00000428828 MPLKIPQ8TAP9 179 aa7.66□□□□□ -1.18
CECR3-201ENST00000428828 APLNQ9ULZ1 77 aa7.66□□□□□ -1.18
CECR3-201ENST00000428828 CASC10Q5T4H9 136 aa7.66□□□□□ -1.18
CECR3-201ENST00000428828 LINC00575Q6W349 94 aa7.65□□□□□ -1.18
CECR3-201ENST00000428828 BPY2O14599 106 aa7.64□□□□□ -1.19
CECR3-201ENST00000428828 C3orf84H3BNL1 204 aa7.63□□□□□ -1.19
CECR3-201ENST00000428828 UBE2DNLQ8IWF7 75 aa7.63□□□□□ -1.19
CECR3-201ENST00000428828 TRBV6-8A0A0A6YYG3 113 aa7.62□□□□□ -1.19
CECR3-201ENST00000428828 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
CECR3-201ENST00000428828 UBE2L6O14933 153 aa7.62□□□□□ -1.19
CECR3-201ENST00000428828 OCR1Q9BZK8 76 aa7.62□□□□□ -1.19
CECR3-201ENST00000428828 TOMM7Q9P0U1 55 aa7.62□□□□□ -1.19
CECR3-201ENST00000428828 LINC00588Q9Y4M8 146 aa7.62□□□□□ -1.19
CECR3-201ENST00000428828 COX17Q14061 63 aa7.62□□□□□ -1.19
CECR3-201ENST00000428828 LELP1Q5T871 98 aa7.61□□□□□ -1.19
CECR3-201ENST00000428828 WFDC10BQ8IUB3 73 aa7.6□□□□□ -1.19
CECR3-201ENST00000428828 Q8IZM0 81 aa7.6□□□□□ -1.19
CECR3-201ENST00000428828 LCE6AA0A183 80 aa7.59□□□□□ -1.19
CECR3-201ENST00000428828 M0R2N4 97 aa7.58□□□□□ -1.2
CECR3-201ENST00000428828 LY6G6CO95867 125 aa7.57□□□□□ -1.2
CECR3-201ENST00000428828 C6orf99Q4VX62 202 aa7.57□□□□□ -1.2
CECR3-201ENST00000428828 Q6ZRP5 223 aa7.56□□□□□ -1.2
CECR3-201ENST00000428828 DNAH1Q9P2D7 4330 aa7.55□□□□□ -1.2
CECR3-201ENST00000428828 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
CECR3-201ENST00000428828 CYP4F30PQ9H0H9 118 aa7.54□□□□□ -1.2
CECR3-201ENST00000428828 IGLV4-60A0A075B6I1 120 aa7.54□□□□□ -1.2
CECR3-201ENST00000428828 IGKV4-1P06312 121 aa7.54□□□□□ -1.2
CECR3-201ENST00000428828 CLPSL2Q6UWE3 100 aa7.54□□□□□ -1.2
CECR3-201ENST00000428828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.54□□□□□ -1.2
CECR3-201ENST00000428828 LINC00476Q8WZB0 136 aa7.54□□□□□ -1.2
CECR3-201ENST00000428828 ANGP03950 147 aaKnown RBP7.53□□□□□ -1.2
CECR3-201ENST00000428828 VPS13DQ5THJ4 4388 aa7.53□□□□□ -1.2
CECR3-201ENST00000428828 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.2
CECR3-201ENST00000428828 COX7BP24311 80 aa7.52□□□□□ -1.2
CECR3-201ENST00000428828 KLK12Q9UKR0 248 aa7.52□□□□□ -1.2
CECR3-201ENST00000428828 ALMS1Q8TCU4 4167 aa7.52□□□□□ -1.21
CECR3-201ENST00000428828 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.21
CECR3-201ENST00000428828 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
CECR3-201ENST00000428828 LINC01556Q5JQF7 62 aa7.52□□□□□ -1.21
CECR3-201ENST00000428828 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.21
CECR3-201ENST00000428828 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 C1orf64Q8NEQ6 169 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 ZCCHC13Q8WW36 166 aaKnown RBP7.5□□□□□ -1.21
CECR3-201ENST00000428828 TRAV22A0A0B4J277 110 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 A0A1B0GUV1 79 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 A0A1B0GW54 56 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 IGLV6-57P01721 117 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 UBE2BP63146 152 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 Q6ZQY7 126 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 KTN1-AS1Q86SY8 53 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 HIGD2AQ9BW72 106 aa7.5□□□□□ -1.21
CECR3-201ENST00000428828 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
CECR3-201ENST00000428828 KRTAP1-5Q9BYS1 174 aa7.49□□□□□ -1.21
CECR3-201ENST00000428828 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
CECR3-201ENST00000428828 REG3AQ06141 175 aa7.48□□□□□ -1.21
CECR3-201ENST00000428828 IGLV10-54A0A075B6I4 117 aa7.47□□□□□ -1.21
CECR3-201ENST00000428828 KIAA0087Q14695 138 aa7.47□□□□□ -1.21
CECR3-201ENST00000428828 SCXQ7RTU7 201 aa7.47□□□□□ -1.21
CECR3-201ENST00000428828 HYDINQ4G0P3 5121 aa7.47□□□□□ -1.21
CECR3-201ENST00000428828 KMT2AQ03164 3969 aa7.47□□□□□ -1.21
CECR3-201ENST00000428828 NDUFS5O43920 106 aa7.45□□□□□ -1.22
CECR3-201ENST00000428828 PSCAO43653 123 aa7.44□□□□□ -1.22
CECR3-201ENST00000428828 SYCNQ0VAF6 134 aa7.44□□□□□ -1.22
CECR3-201ENST00000428828 PRR34Q9NV39 138 aa7.44□□□□□ -1.22
CECR3-201ENST00000428828 IGKV2D-24A0A075B6R9 120 aa7.44□□□□□ -1.22
CECR3-201ENST00000428828 NDUFB1O75438 58 aa7.43□□□□□ -1.22
CECR3-201ENST00000428828 UBE2AP49459 152 aa7.43□□□□□ -1.22
CECR3-201ENST00000428828 DIRC1Q969H9 104 aa7.43□□□□□ -1.22
CECR3-201ENST00000428828 SACSQ9NZJ4 4579 aa7.43□□□□□ -1.22
CECR3-201ENST00000428828 ELOF1P60002 83 aaKnown RBP7.42□□□□□ -1.22
CECR3-201ENST00000428828 PHF5AQ7RTV0 110 aaKnown RBP7.42□□□□□ -1.22
CECR3-201ENST00000428828 Q8NDZ9 215 aa7.42□□□□□ -1.22
CECR3-201ENST00000428828 DNAH10Q8IVF4 4471 aa7.42□□□□□ -1.22
CECR3-201ENST00000428828 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
CECR3-201ENST00000428828 RBM12B-AS1Q9P1G2 102 aa7.42□□□□□ -1.22
CECR3-201ENST00000428828 KMT2CQ8NEZ4 4911 aaKnown RBP7.41□□□□□ -1.22
CECR3-201ENST00000428828 PSPHP1O15172 72 aa7.41□□□□□ -1.22
CECR3-201ENST00000428828 Q6ZR54 194 aa7.41□□□□□ -1.22
CECR3-201ENST00000428828 LIMD2Q9BT23 127 aa7.41□□□□□ -1.22
CECR3-201ENST00000428828 DNAH6Q9C0G6 4158 aa7.41□□□□□ -1.22
CECR3-201ENST00000428828 Q5VV11 94 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms