RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 HIST1H2BMQ99879 126 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 HIGD2AQ9BW72 106 aa5.56□□□□□ -1.52
TRIM39-208ENST00000428555 LGALS3P17931 250 aaKnown RBP5.55□□□□□ -1.52
TRIM39-208ENST00000428555 FAM229BQ4G0N7 80 aa5.55□□□□□ -1.52
TRIM39-208ENST00000428555 C14orf144Q96I85 54 aa5.55□□□□□ -1.52
TRIM39-208ENST00000428555 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
TRIM39-208ENST00000428555 SYS1-DBNDD2H3BUS1 97 aa5.54□□□□□ -1.52
TRIM39-208ENST00000428555 TAL2Q16559 108 aa5.54□□□□□ -1.52
TRIM39-208ENST00000428555 KCNQ1DNQ9H478 68 aa5.54□□□□□ -1.52
TRIM39-208ENST00000428555 IGKV2D-26A0A0A0MRZ7 120 aa5.53□□□□□ -1.52
TRIM39-208ENST00000428555 LOC107984156A0A0G2JMH3 177 aa5.53□□□□□ -1.52
TRIM39-208ENST00000428555 PRYO14603 147 aa5.53□□□□□ -1.52
TRIM39-208ENST00000428555 NMUP48645 174 aa5.53□□□□□ -1.52
TRIM39-208ENST00000428555 ARL17AQ8IVW1 177 aa5.53□□□□□ -1.52
TRIM39-208ENST00000428555 TRIAP1O43715 76 aa5.52□□□□□ -1.53
TRIM39-208ENST00000428555 SPRR1AP35321 89 aa5.52□□□□□ -1.53
TRIM39-208ENST00000428555 AKR1D1P51857 326 aa5.52□□□□□ -1.53
TRIM39-208ENST00000428555 ADAMTSL4-AS1Q5T5F5 129 aa5.52□□□□□ -1.53
TRIM39-208ENST00000428555 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
TRIM39-208ENST00000428555 VPS25Q9BRG1 176 aa5.52□□□□□ -1.53
TRIM39-208ENST00000428555 A0A0J9YXY3 114 aa5.51□□□□□ -1.53
TRIM39-208ENST00000428555 ETDCA0A1B0GVM5 59 aa5.51□□□□□ -1.53
TRIM39-208ENST00000428555 E9PLD3 99 aa5.51□□□□□ -1.53
TRIM39-208ENST00000428555 KRTAP4-16G5E9R7 235 aaPredicted RBP5.51□□□□□ -1.53
TRIM39-208ENST00000428555 H3BS24 57 aa5.51□□□□□ -1.53
TRIM39-208ENST00000428555 LCE2CQ5TA81 110 aa5.51□□□□□ -1.53
TRIM39-208ENST00000428555 C3orf22Q8N5N4 141 aa5.51□□□□□ -1.53
TRIM39-208ENST00000428555 LINC00337Q8N6G1 96 aa5.51□□□□□ -1.53
TRIM39-208ENST00000428555 SPRR4Q96PI1 79 aa5.51□□□□□ -1.53
TRIM39-208ENST00000428555 TRBV10-2A0A0K0K1G8 114 aa5.5□□□□□ -1.53
TRIM39-208ENST00000428555 DDTP30046 118 aa5.5□□□□□ -1.53
TRIM39-208ENST00000428555 NPC2P61916 151 aa5.5□□□□□ -1.53
TRIM39-208ENST00000428555 LINC01545Q5VT33 79 aa5.5□□□□□ -1.53
TRIM39-208ENST00000428555 SOSTDC1Q6X4U4 206 aa5.5□□□□□ -1.53
TRIM39-208ENST00000428555 LINC00304Q8N9R0 145 aa5.5□□□□□ -1.53
TRIM39-208ENST00000428555 MIEN1Q9BRT3 115 aa5.5□□□□□ -1.53
TRIM39-208ENST00000428555 C3orf79P0CE67 100 aa5.49□□□□□ -1.53
TRIM39-208ENST00000428555 SMIM20Q8N5G0 67 aa5.49□□□□□ -1.53
TRIM39-208ENST00000428555 PPDPFQ9H3Y8 114 aa5.49□□□□□ -1.53
TRIM39-208ENST00000428555 NDUFC2O95298 119 aa5.48□□□□□ -1.53
TRIM39-208ENST00000428555 S100A7L2Q5SY68 101 aa5.48□□□□□ -1.53
TRIM39-208ENST00000428555 RETNLBQ9BQ08 111 aa5.48□□□□□ -1.53
TRIM39-208ENST00000428555 ZNF706Q9Y5V0 76 aaPredicted RBP5.48□□□□□ -1.53
TRIM39-208ENST00000428555 ERC2-IT1O76042 136 aa5.47□□□□□ -1.53
TRIM39-208ENST00000428555 IGLV6-57P01721 117 aa5.47□□□□□ -1.53
TRIM39-208ENST00000428555 KRTDAPP60985 99 aa5.47□□□□□ -1.53
TRIM39-208ENST00000428555 COA6Q5JTJ3 125 aaKnown RBP5.47□□□□□ -1.53
TRIM39-208ENST00000428555 LITAFQ99732 161 aa5.47□□□□□ -1.53
TRIM39-208ENST00000428555 TTTY13Q9BZ97 58 aa5.47□□□□□ -1.53
TRIM39-208ENST00000428555 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
TRIM39-208ENST00000428555 SIGMAR1Q99720 223 aa5.46□□□□□ -1.54
TRIM39-208ENST00000428555 Q9BRP9 147 aa5.46□□□□□ -1.54
TRIM39-208ENST00000428555 MUC2Q02817 5179 aa5.45□□□□□ -1.54
TRIM39-208ENST00000428555 ZNF815PA8K554 130 aa5.45□□□□□ -1.54
TRIM39-208ENST00000428555 CD164Q04900 197 aa5.45□□□□□ -1.54
TRIM39-208ENST00000428555 LINC00308Q8TCZ7 52 aa5.45□□□□□ -1.54
TRIM39-208ENST00000428555 TRAV23DV6A0A075B6W5 121 aa5.44□□□□□ -1.54
TRIM39-208ENST00000428555 TIMM17BO60830 172 aa5.44□□□□□ -1.54
TRIM39-208ENST00000428555 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
TRIM39-208ENST00000428555 SPAG11AQ6PDA7 123 aa5.44□□□□□ -1.54
TRIM39-208ENST00000428555 Q6ZRX8 168 aa5.44□□□□□ -1.54
TRIM39-208ENST00000428555 OR13C6PQ8NH95 151 aa5.44□□□□□ -1.54
TRIM39-208ENST00000428555 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
TRIM39-208ENST00000428555 K7ERU9 68 aa5.43□□□□□ -1.54
TRIM39-208ENST00000428555 ZNF73O43830 326 aaPredicted RBP5.43□□□□□ -1.54
TRIM39-208ENST00000428555 Q8NBF4 154 aa5.43□□□□□ -1.54
TRIM39-208ENST00000428555 SPANXCQ9NY87 97 aa5.43□□□□□ -1.54
TRIM39-208ENST00000428555 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
TRIM39-208ENST00000428555 ATOH7Q8N100 152 aa5.42□□□□□ -1.54
TRIM39-208ENST00000428555 SS18L2Q9UHA2 77 aa5.42□□□□□ -1.54
TRIM39-208ENST00000428555 IGLV9-49A0A0B4J1Y8 123 aa5.41□□□□□ -1.54
TRIM39-208ENST00000428555 C20orf202A1L168 122 aa5.41□□□□□ -1.54
TRIM39-208ENST00000428555 JOSD1Q15040 202 aaPredicted RBP5.41□□□□□ -1.54
TRIM39-208ENST00000428555 ST20-AS1Q8NBB2 130 aa5.41□□□□□ -1.54
TRIM39-208ENST00000428555 HINT1P49773 126 aaPredicted RBP5.4□□□□□ -1.54
TRIM39-208ENST00000428555 MOBPQ13875 183 aa5.4□□□□□ -1.54
TRIM39-208ENST00000428555 SCGB1D4Q6XE38 83 aa5.4□□□□□ -1.54
TRIM39-208ENST00000428555 SSBP3-AS1Q7Z2R9 100 aa5.4□□□□□ -1.54
TRIM39-208ENST00000428555 C4orf26Q17RF5 130 aa5.39□□□□□ -1.55
TRIM39-208ENST00000428555 PCP2Q8IVA1 136 aa5.39□□□□□ -1.55
TRIM39-208ENST00000428555 SPINK1P00995 79 aa5.38□□□□□ -1.55
TRIM39-208ENST00000428555 SPANXDQ9BXN6 97 aa5.38□□□□□ -1.55
TRIM39-208ENST00000428555 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
TRIM39-208ENST00000428555 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
TRIM39-208ENST00000428555 HIST3H2BBQ8N257 126 aa5.37□□□□□ -1.55
TRIM39-208ENST00000428555 IFITM1P13164 125 aa5.36□□□□□ -1.55
TRIM39-208ENST00000428555 C6orf99Q4VX62 202 aa5.36□□□□□ -1.55
TRIM39-208ENST00000428555 HIST1H2BLQ99880 126 aa5.36□□□□□ -1.55
TRIM39-208ENST00000428555 DHRS4-AS1Q9P1J3 65 aa5.36□□□□□ -1.55
TRIM39-208ENST00000428555 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
TRIM39-208ENST00000428555 A6NDN8 102 aa5.35□□□□□ -1.55
TRIM39-208ENST00000428555 COX7BP24311 80 aa5.35□□□□□ -1.55
TRIM39-208ENST00000428555 S100A2P29034 98 aa5.35□□□□□ -1.55
TRIM39-208ENST00000428555 C9orf153Q5TBE3 101 aa5.35□□□□□ -1.55
TRIM39-208ENST00000428555 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
TRIM39-208ENST00000428555 FP248Q71RG6 208 aaPredicted RBP5.35□□□□□ -1.55
TRIM39-208ENST00000428555 ELOF1P60002 83 aaKnown RBP5.34□□□□□ -1.55
TRIM39-208ENST00000428555 OCIAD2Q56VL3 154 aa5.34□□□□□ -1.55
TRIM39-208ENST00000428555 Q6ZVH6 145 aa5.34□□□□□ -1.55
TRIM39-208ENST00000428555 Q75L30 129 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms