RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 DEFB105AQ8NG35 78 aa10.5□□□□□ -0.73
C9orf3-206ENST00000428313 H3BPC8 53 aa10.49□□□□□ -0.73
C9orf3-206ENST00000428313 IGLV1-51P01701 117 aa10.48□□□□□ -0.73
C9orf3-206ENST00000428313 PRB2P02812 416 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-206ENST00000428313 SPG11Q96JI7 2443 aa10.46□□□□□ -0.73
C9orf3-206ENST00000428313 CAMK2N2Q96S95 79 aa10.46□□□□□ -0.73
C9orf3-206ENST00000428313 DHRS4-AS1Q9P1J3 65 aa10.46□□□□□ -0.73
C9orf3-206ENST00000428313 ZFYVE26Q68DK2 2539 aa10.46□□□□□ -0.74
C9orf3-206ENST00000428313 LELP1Q5T871 98 aa10.46□□□□□ -0.74
C9orf3-206ENST00000428313 C7orf65Q6ZTY9 151 aa10.45□□□□□ -0.74
C9orf3-206ENST00000428313 CDC42SE1Q9NRR8 79 aa10.45□□□□□ -0.74
C9orf3-206ENST00000428313 A6NED7 52 aa10.44□□□□□ -0.74
C9orf3-206ENST00000428313 X6R8D5 127 aa10.44□□□□□ -0.74
C9orf3-206ENST00000428313 MAPK1IP1LQ8NDC0 245 aa10.44□□□□□ -0.74
C9orf3-206ENST00000428313 ITPR1Q14643 2758 aa10.43□□□□□ -0.74
C9orf3-206ENST00000428313 TLN2Q9Y4G6 2542 aa10.43□□□□□ -0.74
C9orf3-206ENST00000428313 FAM208BQ5VWN6 2430 aa10.43□□□□□ -0.74
C9orf3-206ENST00000428313 CSMD2Q7Z408 3487 aa10.42□□□□□ -0.74
C9orf3-206ENST00000428313 SETXQ7Z333 2677 aaKnown RBP10.42□□□□□ -0.74
C9orf3-206ENST00000428313 APOC4P55056 127 aa10.41□□□□□ -0.74
C9orf3-206ENST00000428313 FASNP49327 2511 aaKnown RBP10.4□□□□□ -0.74
C9orf3-206ENST00000428313 JMJD1CQ15652 2540 aa10.4□□□□□ -0.74
C9orf3-206ENST00000428313 Q6ZRX8 168 aa10.38□□□□□ -0.75
C9orf3-206ENST00000428313 IGKV2D-24A0A075B6R9 120 aa10.38□□□□□ -0.75
C9orf3-206ENST00000428313 H0Y9P7 68 aa10.37□□□□□ -0.75
C9orf3-206ENST00000428313 DEFB113Q30KQ7 82 aa10.37□□□□□ -0.75
C9orf3-206ENST00000428313 NKAPP1Q8N9T2 125 aa10.37□□□□□ -0.75
C9orf3-206ENST00000428313 MYO9AB2RTY4 2548 aa10.37□□□□□ -0.75
C9orf3-206ENST00000428313 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
C9orf3-206ENST00000428313 C9orf163Q8N9P6 203 aa10.36□□□□□ -0.75
C9orf3-206ENST00000428313 DOPEY1Q5JWR5 2465 aa10.36□□□□□ -0.75
C9orf3-206ENST00000428313 C4orf48Q5BLP8 95 aa10.36□□□□□ -0.75
C9orf3-206ENST00000428313 WFDC13Q8IUB5 93 aa10.36□□□□□ -0.75
C9orf3-206ENST00000428313 CELSR2Q9HCU4 2923 aa10.35□□□□□ -0.75
C9orf3-206ENST00000428313 KRTAP29-1A8MX34 341 aaPredicted RBP10.35□□□□□ -0.75
C9orf3-206ENST00000428313 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
C9orf3-206ENST00000428313 AKAP9Q99996 3911 aa10.35□□□□□ -0.75
C9orf3-206ENST00000428313 DNAJC9-AS1A6NH13 148 aa10.33□□□□□ -0.76
C9orf3-206ENST00000428313 KRTAP4-16G5E9R7 235 aaPredicted RBP10.33□□□□□ -0.76
C9orf3-206ENST00000428313 COA5Q86WW8 74 aa10.33□□□□□ -0.76
C9orf3-206ENST00000428313 PKD1L2Q7Z442 2459 aa10.33□□□□□ -0.76
C9orf3-206ENST00000428313 MOBPQ13875 183 aa10.32□□□□□ -0.76
C9orf3-206ENST00000428313 KRTAP26-1Q6PEX3 210 aa10.31□□□□□ -0.76
C9orf3-206ENST00000428313 C15orf56Q8N910 161 aa10.31□□□□□ -0.76
C9orf3-206ENST00000428313 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
C9orf3-206ENST00000428313 LINC01558Q9Y6Z2 57 aa10.31□□□□□ -0.76
C9orf3-206ENST00000428313 PLAC8Q9NZF1 115 aa10.31□□□□□ -0.76
C9orf3-206ENST00000428313 SPRR1AP35321 89 aa10.3□□□□□ -0.76
C9orf3-206ENST00000428313 WFDC10BQ8IUB3 73 aa10.3□□□□□ -0.76
C9orf3-206ENST00000428313 DEFB116Q30KQ4 102 aa10.3□□□□□ -0.76
C9orf3-206ENST00000428313 IGLV7-46A0A075B6I9 117 aa10.29□□□□□ -0.76
C9orf3-206ENST00000428313 APCP25054 2843 aa10.29□□□□□ -0.76
C9orf3-206ENST00000428313 C8orf87E5RJ46 101 aa10.28□□□□□ -0.76
C9orf3-206ENST00000428313 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
C9orf3-206ENST00000428313 PLA2G2DQ9UNK4 145 aa10.28□□□□□ -0.76
C9orf3-206ENST00000428313 GCN1Q92616 2671 aaKnown RBP10.28□□□□□ -0.76
C9orf3-206ENST00000428313 FN1P02751 2386 aaKnown RBP10.27□□□□□ -0.77
C9orf3-206ENST00000428313 LINC00476Q8WZB0 136 aa10.27□□□□□ -0.77
C9orf3-206ENST00000428313 PTPN13Q12923 2485 aa10.27□□□□□ -0.77
C9orf3-206ENST00000428313 ZANQ9Y493 2812 aa10.26□□□□□ -0.77
C9orf3-206ENST00000428313 CASC2Q6XLA1 102 aa10.26□□□□□ -0.77
C9orf3-206ENST00000428313 KRTAP1-3Q8IUG1 177 aa10.26□□□□□ -0.77
C9orf3-206ENST00000428313 IGLV1-50A0A075B6I6 118 aa10.24□□□□□ -0.77
C9orf3-206ENST00000428313 ANKRD17O75179 2603 aaKnown RBP10.24□□□□□ -0.77
C9orf3-206ENST00000428313 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
C9orf3-206ENST00000428313 USP9YO00507 2555 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-206ENST00000428313 DEFB4AO15263 64 aa10.23□□□□□ -0.77
C9orf3-206ENST00000428313 KRTAP10-9P60411 292 aa10.23□□□□□ -0.77
C9orf3-206ENST00000428313 IGFL1Q6UW32 110 aa10.22□□□□□ -0.77
C9orf3-206ENST00000428313 IGSF10Q6WRI0 2623 aa10.22□□□□□ -0.77
C9orf3-206ENST00000428313 FLNBO75369 2602 aaKnown RBP10.21□□□□□ -0.77
C9orf3-206ENST00000428313 CFAP46Q8IYW2 2715 aa10.2□□□□□ -0.78
C9orf3-206ENST00000428313 TLX1NBP0CAT3 122 aa10.2□□□□□ -0.78
C9orf3-206ENST00000428313 CNBPP62633 177 aaKnown RBP10.2□□□□□ -0.78
C9orf3-206ENST00000428313 RPL37AP8A6NKH3 93 aa10.19□□□□□ -0.78
C9orf3-206ENST00000428313 USP9XQ93008 2570 aaPredicted RBP10.19□□□□□ -0.78
C9orf3-206ENST00000428313 IGLV8-61A0A075B6I0 122 aa10.19□□□□□ -0.78
C9orf3-206ENST00000428313 UTP20O75691 2785 aaKnown RBP10.19□□□□□ -0.78
C9orf3-206ENST00000428313 HTN3P15516 51 aa10.18□□□□□ -0.78
C9orf3-206ENST00000428313 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
C9orf3-206ENST00000428313 A0A087WSZ3 146 aa10.18□□□□□ -0.78
C9orf3-206ENST00000428313 SPART-AS1P0CW21 52 aa10.18□□□□□ -0.78
C9orf3-206ENST00000428313 RPL37AP61513 92 aaKnown RBP10.18□□□□□ -0.78
C9orf3-206ENST00000428313 FLNCQ14315 2725 aa10.17□□□□□ -0.78
C9orf3-206ENST00000428313 Q8NAQ8 132 aa10.17□□□□□ -0.78
C9orf3-206ENST00000428313 HELZ2Q9BYK8 2649 aaKnown RBP10.16□□□□□ -0.78
C9orf3-206ENST00000428313 FBN2P35556 2912 aa10.16□□□□□ -0.78
C9orf3-206ENST00000428313 CUBNO60494 3623 aa10.16□□□□□ -0.78
C9orf3-206ENST00000428313 SPAG11AQ6PDA7 123 aa10.16□□□□□ -0.78
C9orf3-206ENST00000428313 A8MWP4 228 aa10.15□□□□□ -0.78
C9orf3-206ENST00000428313 SPINK7P58062 85 aa10.15□□□□□ -0.78
C9orf3-206ENST00000428313 NIPBLQ6KC79 2804 aaeCLIP10.14□□□□□ -0.79
C9orf3-206ENST00000428313 NBEAL2Q6ZNJ1 2754 aa10.12□□□□□ -0.79
C9orf3-206ENST00000428313 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
C9orf3-206ENST00000428313 A0A1W2PNN7 141 aa10.12□□□□□ -0.79
C9orf3-206ENST00000428313 LINC00313P59037 77 aa10.11□□□□□ -0.79
C9orf3-206ENST00000428313 MYO18BQ8IUG5 2567 aa10.1□□□□□ -0.79
C9orf3-206ENST00000428313 FAM168BA1KXE4 195 aa10.09□□□□□ -0.79
C9orf3-206ENST00000428313 TEX15Q9BXT5 2789 aa10.09□□□□□ -0.79
C9orf3-206ENST00000428313 MAST4O15021 2626 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms