RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 SPEGQ15772 3267 aa6.55□□□□□ -1.36
SNX13-203ENST00000428135 CHD6Q8TD26 2715 aa6.55□□□□□ -1.36
SNX13-203ENST00000428135 LINC00476Q8WZB0 136 aa6.55□□□□□ -1.36
SNX13-203ENST00000428135 C1orf64Q8NEQ6 169 aa6.54□□□□□ -1.36
SNX13-203ENST00000428135 PLA2G1BP04054 148 aaKnown RBP6.53□□□□□ -1.36
SNX13-203ENST00000428135 SERTAD4-AS1Q5TG53 156 aa6.53□□□□□ -1.36
SNX13-203ENST00000428135 BOD1L1Q8NFC6 3051 aa6.53□□□□□ -1.36
SNX13-203ENST00000428135 V9GYY9 64 aa6.53□□□□□ -1.36
SNX13-203ENST00000428135 CSNK1G2-AS1Q8NCQ2 148 aa6.53□□□□□ -1.36
SNX13-203ENST00000428135 Q6ZRX8 168 aa6.52□□□□□ -1.37
SNX13-203ENST00000428135 Q96NJ1 140 aa6.52□□□□□ -1.37
SNX13-203ENST00000428135 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
SNX13-203ENST00000428135 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
SNX13-203ENST00000428135 COL6A5A8TX70 2615 aa6.52□□□□□ -1.37
SNX13-203ENST00000428135 hDV103S1A0JD37 113 aa6.51□□□□□ -1.37
SNX13-203ENST00000428135 ANAPC11Q9NYG5 84 aa6.51□□□□□ -1.37
SNX13-203ENST00000428135 DMXL2Q8TDJ6 3036 aa6.51□□□□□ -1.37
SNX13-203ENST00000428135 LINC01546A6NGU7 62 aa6.5□□□□□ -1.37
SNX13-203ENST00000428135 A0A0G2JQZ4 141 aa6.5□□□□□ -1.37
SNX13-203ENST00000428135 A0A1W2PNN7 141 aa6.5□□□□□ -1.37
SNX13-203ENST00000428135 GVQW2A0A096LPI5 108 aaPredicted RBP6.5□□□□□ -1.37
SNX13-203ENST00000428135 FREM2Q5SZK8 3169 aa6.5□□□□□ -1.37
SNX13-203ENST00000428135 IGLV5-45A0A087WSX0 123 aa6.49□□□□□ -1.37
SNX13-203ENST00000428135 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
SNX13-203ENST00000428135 BCE1O60756 84 aa6.49□□□□□ -1.37
SNX13-203ENST00000428135 LINC00313P59037 77 aa6.49□□□□□ -1.37
SNX13-203ENST00000428135 STAB1Q9NY15 2570 aa6.49□□□□□ -1.37
SNX13-203ENST00000428135 GCN1Q92616 2671 aaKnown RBP6.49□□□□□ -1.37
SNX13-203ENST00000428135 IGLV8-61A0A075B6I0 122 aa6.48□□□□□ -1.37
SNX13-203ENST00000428135 C9orf92A6NGG3 77 aa6.48□□□□□ -1.37
SNX13-203ENST00000428135 Q8NBF4 154 aa6.48□□□□□ -1.37
SNX13-203ENST00000428135 GIG44P09565 113 aaPredicted RBP6.47□□□□□ -1.37
SNX13-203ENST00000428135 C19orf73Q9NVV2 129 aa6.47□□□□□ -1.37
SNX13-203ENST00000428135 CASC10Q5T4H9 136 aa6.47□□□□□ -1.37
SNX13-203ENST00000428135 ATMQ13315 3056 aa6.46□□□□□ -1.38
SNX13-203ENST00000428135 SMCPP49901 116 aaPredicted RBP6.45□□□□□ -1.38
SNX13-203ENST00000428135 UNC79Q9P2D8 2635 aa6.45□□□□□ -1.38
SNX13-203ENST00000428135 VPREB1P12018 145 aa6.45□□□□□ -1.38
SNX13-203ENST00000428135 COL12A1Q99715 3063 aa6.45□□□□□ -1.38
SNX13-203ENST00000428135 DMXL1Q9Y485 3027 aa6.44□□□□□ -1.38
SNX13-203ENST00000428135 CR1P17927 2039 aa6.44□□□□□ -1.38
SNX13-203ENST00000428135 SMIM26A0A096LP01 95 aa6.44□□□□□ -1.38
SNX13-203ENST00000428135 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
SNX13-203ENST00000428135 CXCL6P80162 114 aa6.43□□□□□ -1.38
SNX13-203ENST00000428135 EIF4EBP3O60516 100 aaPredicted RBP6.43□□□□□ -1.38
SNX13-203ENST00000428135 A0A087WTM6 91 aa6.43□□□□□ -1.38
SNX13-203ENST00000428135 Q6ZQT0 140 aa6.43□□□□□ -1.38
SNX13-203ENST00000428135 ATP11AUNQ6ZP68 121 aa6.43□□□□□ -1.38
SNX13-203ENST00000428135 TACC2O95359 2948 aa6.43□□□□□ -1.38
SNX13-203ENST00000428135 TM2D3Q9BRN9 247 aa6.43□□□□□ -1.38
SNX13-203ENST00000428135 MYO15AQ9UKN7 3530 aa6.43□□□□□ -1.38
SNX13-203ENST00000428135 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
SNX13-203ENST00000428135 CDIP1Q9H305 208 aa6.42□□□□□ -1.38
SNX13-203ENST00000428135 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
SNX13-203ENST00000428135 SPAG11AQ6PDA7 123 aa6.41□□□□□ -1.38
SNX13-203ENST00000428135 DSCR10P59022 87 aa6.41□□□□□ -1.38
SNX13-203ENST00000428135 CFAP47Q6ZTR5 3102 aa6.41□□□□□ -1.38
SNX13-203ENST00000428135 IGLV1-50A0A075B6I6 118 aa6.4□□□□□ -1.38
SNX13-203ENST00000428135 C9orf129Q5T035 196 aaKnown RBP6.4□□□□□ -1.39
SNX13-203ENST00000428135 OBSCN-AS1Q96MR7 158 aa6.39□□□□□ -1.39
SNX13-203ENST00000428135 LITAFQ99732 161 aa6.39□□□□□ -1.39
SNX13-203ENST00000428135 IGLV6-57P01721 117 aa6.38□□□□□ -1.39
SNX13-203ENST00000428135 NBEAL1Q6ZS30 2694 aa6.38□□□□□ -1.39
SNX13-203ENST00000428135 A0A1B0GU69 56 aa6.38□□□□□ -1.39
SNX13-203ENST00000428135 USP34Q70CQ2 3546 aa6.38□□□□□ -1.39
SNX13-203ENST00000428135 K7EQZ3 153 aa6.38□□□□□ -1.39
SNX13-203ENST00000428135 KLK9Q2XQG4 91 aa6.37□□□□□ -1.39
SNX13-203ENST00000428135 NOTCH1P46531 2555 aa6.37□□□□□ -1.39
SNX13-203ENST00000428135 LINC00304Q8N9R0 145 aa6.37□□□□□ -1.39
SNX13-203ENST00000428135 FLNCQ14315 2725 aa6.37□□□□□ -1.39
SNX13-203ENST00000428135 TRBV7-4A0A0J9YYF1 115 aa6.36□□□□□ -1.39
SNX13-203ENST00000428135 APLNQ9ULZ1 77 aa6.36□□□□□ -1.39
SNX13-203ENST00000428135 ACYP2P14621 99 aa6.36□□□□□ -1.39
SNX13-203ENST00000428135 CRYBG3Q68DQ2 2970 aa6.36□□□□□ -1.39
SNX13-203ENST00000428135 C1orf195Q5TG92 126 aa6.35□□□□□ -1.39
SNX13-203ENST00000428135 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
SNX13-203ENST00000428135 IGFL1Q6UW32 110 aa6.35□□□□□ -1.39
SNX13-203ENST00000428135 ZNF861PO60384 105 aa6.34□□□□□ -1.39
SNX13-203ENST00000428135 PRR34Q9NV39 138 aa6.34□□□□□ -1.39
SNX13-203ENST00000428135 TRAV22A0A0B4J277 110 aa6.34□□□□□ -1.39
SNX13-203ENST00000428135 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
SNX13-203ENST00000428135 UBR5O95071 2799 aaPredicted RBP6.34□□□□□ -1.39
SNX13-203ENST00000428135 ZZEF1O43149 2961 aa6.34□□□□□ -1.39
SNX13-203ENST00000428135 TNP2Q05952 138 aa6.34□□□□□ -1.4
SNX13-203ENST00000428135 PRO0461Q9UI25 63 aa6.34□□□□□ -1.4
SNX13-203ENST00000428135 KCNQ1DNQ9H478 68 aa6.33□□□□□ -1.4
SNX13-203ENST00000428135 LOC110117498A0A087WWA1 95 aa6.33□□□□□ -1.4
SNX13-203ENST00000428135 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
SNX13-203ENST00000428135 C9orf163Q8N9P6 203 aa6.32□□□□□ -1.4
SNX13-203ENST00000428135 ERC2-IT1O76042 136 aa6.31□□□□□ -1.4
SNX13-203ENST00000428135 A8MWP4 228 aa6.31□□□□□ -1.4
SNX13-203ENST00000428135 Q8N377 158 aa6.3□□□□□ -1.4
SNX13-203ENST00000428135 MRPL34Q9BQ48 92 aaKnown RBP6.3□□□□□ -1.4
SNX13-203ENST00000428135 ADGRG4Q8IZF6 3080 aa6.3□□□□□ -1.4
SNX13-203ENST00000428135 IGLV7-43P04211 117 aa6.3□□□□□ -1.4
SNX13-203ENST00000428135 NBEAQ8NFP9 2946 aa6.29□□□□□ -1.4
SNX13-203ENST00000428135 LRBAP50851 2863 aa6.29□□□□□ -1.4
SNX13-203ENST00000428135 LINC00612Q8N6U2 182 aa6.28□□□□□ -1.4
SNX13-203ENST00000428135 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
SNX13-203ENST00000428135 ITPR1Q14643 2758 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms