RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.85□□□□□ -0.67
AL954642.1-201ENST00000428088 HIST1H2BHQ93079 126 aa10.85□□□□□ -0.67
AL954642.1-201ENST00000428088 HIST1H2BNQ99877 126 aa10.85□□□□□ -0.67
AL954642.1-201ENST00000428088 HIST1H2BMQ99879 126 aa10.85□□□□□ -0.67
AL954642.1-201ENST00000428088 TRAV23DV6A0A075B6W5 121 aa10.84□□□□□ -0.67
AL954642.1-201ENST00000428088 IGLV9-49A0A0B4J1Y8 123 aa10.84□□□□□ -0.67
AL954642.1-201ENST00000428088 MOBPQ13875 183 aa10.83□□□□□ -0.68
AL954642.1-201ENST00000428088 SPINK1P00995 79 aa10.82□□□□□ -0.68
AL954642.1-201ENST00000428088 FP248Q71RG6 208 aaPredicted RBP10.81□□□□□ -0.68
AL954642.1-201ENST00000428088 ZNF73O43830 326 aaPredicted RBP10.8□□□□□ -0.68
AL954642.1-201ENST00000428088 JOSD1Q15040 202 aaPredicted RBP10.8□□□□□ -0.68
AL954642.1-201ENST00000428088 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
AL954642.1-201ENST00000428088 FAT4Q6V0I7 4981 aa10.8□□□□□ -0.68
AL954642.1-201ENST00000428088 SSBP3-AS1Q7Z2R9 100 aa10.79□□□□□ -0.68
AL954642.1-201ENST00000428088 LITAFQ99732 161 aa10.79□□□□□ -0.68
AL954642.1-201ENST00000428088 PET117Q6UWS5 81 aa10.78□□□□□ -0.68
AL954642.1-201ENST00000428088 LINC00308Q8TCZ7 52 aa10.78□□□□□ -0.68
AL954642.1-201ENST00000428088 ST20-AS1Q8NBB2 130 aa10.76□□□□□ -0.69
AL954642.1-201ENST00000428088 SPANXCQ9NY87 97 aa10.76□□□□□ -0.69
AL954642.1-201ENST00000428088 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
AL954642.1-201ENST00000428088 TIMM17BO60830 172 aa10.75□□□□□ -0.69
AL954642.1-201ENST00000428088 OR13C6PQ8NH95 151 aa10.75□□□□□ -0.69
AL954642.1-201ENST00000428088 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
AL954642.1-201ENST00000428088 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
AL954642.1-201ENST00000428088 HINT1P49773 126 aaPredicted RBP10.74□□□□□ -0.69
AL954642.1-201ENST00000428088 KRTAP13-3Q3SY46 172 aa10.74□□□□□ -0.69
AL954642.1-201ENST00000428088 C9orf153Q5TBE3 101 aa10.73□□□□□ -0.69
AL954642.1-201ENST00000428088 Q8N377 158 aa10.73□□□□□ -0.69
AL954642.1-201ENST00000428088 CBY1Q9Y3M2 126 aa10.73□□□□□ -0.69
AL954642.1-201ENST00000428088 RPS29P62273 56 aaKnown RBP10.71□□□□□ -0.69
AL954642.1-201ENST00000428088 KRTDAPP60985 99 aa10.7□□□□□ -0.7
AL954642.1-201ENST00000428088 LCE2AQ5TA79 106 aaPredicted RBP10.68□□□□□ -0.7
AL954642.1-201ENST00000428088 SPANXDQ9BXN6 97 aa10.68□□□□□ -0.7
AL954642.1-201ENST00000428088 C5orf52A6NGY3 159 aa10.67□□□□□ -0.7
AL954642.1-201ENST00000428088 SLC25A20O43772 301 aa10.67□□□□□ -0.7
AL954642.1-201ENST00000428088 COA6Q5JTJ3 125 aaKnown RBP10.67□□□□□ -0.7
AL954642.1-201ENST00000428088 LINC00518Q8N0U6 118 aa10.66□□□□□ -0.7
AL954642.1-201ENST00000428088 DHRS4-AS1Q9P1J3 65 aa10.66□□□□□ -0.7
AL954642.1-201ENST00000428088 SPRR1BP22528 89 aa10.64□□□□□ -0.71
AL954642.1-201ENST00000428088 COX7BP24311 80 aa10.64□□□□□ -0.71
AL954642.1-201ENST00000428088 C6orf99Q4VX62 202 aa10.64□□□□□ -0.71
AL954642.1-201ENST00000428088 ANKRD39Q53RE8 183 aa10.64□□□□□ -0.71
AL954642.1-201ENST00000428088 SCGB1D4Q6XE38 83 aa10.64□□□□□ -0.71
AL954642.1-201ENST00000428088 ELOF1P60002 83 aaKnown RBP10.63□□□□□ -0.71
AL954642.1-201ENST00000428088 ASB16-AS1Q495Z4 193 aa10.63□□□□□ -0.71
AL954642.1-201ENST00000428088 ATOH7Q8N100 152 aa10.62□□□□□ -0.71
AL954642.1-201ENST00000428088 C20orf202A1L168 122 aa10.61□□□□□ -0.71
AL954642.1-201ENST00000428088 SLC25A34Q6PIV7 304 aa10.61□□□□□ -0.71
AL954642.1-201ENST00000428088 HRCT1Q6UXD1 115 aa10.6□□□□□ -0.71
AL954642.1-201ENST00000428088 LAMTOR3Q9UHA4 124 aa10.59□□□□□ -0.71
AL954642.1-201ENST00000428088 TAL2Q16559 108 aa10.58□□□□□ -0.72
AL954642.1-201ENST00000428088 PCP2Q8IVA1 136 aa10.58□□□□□ -0.72
AL954642.1-201ENST00000428088 DEFB105AQ8NG35 78 aa10.58□□□□□ -0.72
AL954642.1-201ENST00000428088 IFITM1P13164 125 aa10.57□□□□□ -0.72
AL954642.1-201ENST00000428088 SEC61BP60468 96 aaKnown RBP10.57□□□□□ -0.72
AL954642.1-201ENST00000428088 MUSTN1Q8IVN3 82 aa10.56□□□□□ -0.72
AL954642.1-201ENST00000428088 COPS9Q8WXC6 57 aa10.56□□□□□ -0.72
AL954642.1-201ENST00000428088 KRTAP4-1Q9BYQ7 146 aa10.56□□□□□ -0.72
AL954642.1-201ENST00000428088 A6NDN8 102 aa10.55□□□□□ -0.72
AL954642.1-201ENST00000428088 Q1RN00 199 aa10.55□□□□□ -0.72
AL954642.1-201ENST00000428088 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
AL954642.1-201ENST00000428088 Q6ZVH6 145 aa10.54□□□□□ -0.72
AL954642.1-201ENST00000428088 TEX49A0A1B0GTD5 131 aa10.53□□□□□ -0.72
AL954642.1-201ENST00000428088 XP32Q5T750 250 aa10.53□□□□□ -0.72
AL954642.1-201ENST00000428088 LIMD2Q9BT23 127 aa10.53□□□□□ -0.72
AL954642.1-201ENST00000428088 KRTAP9-2Q9BYQ4 174 aa10.53□□□□□ -0.72
AL954642.1-201ENST00000428088 A0A1B0GWB2 263 aa10.52□□□□□ -0.73
AL954642.1-201ENST00000428088 AKR1D1P51857 326 aa10.5□□□□□ -0.73
AL954642.1-201ENST00000428088 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
AL954642.1-201ENST00000428088 PRO1933Q9H354 126 aa10.49□□□□□ -0.73
AL954642.1-201ENST00000428088 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
AL954642.1-201ENST00000428088 TRAV13-2A0A0B4J235 113 aa10.47□□□□□ -0.73
AL954642.1-201ENST00000428088 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
AL954642.1-201ENST00000428088 CD164Q04900 197 aa10.47□□□□□ -0.73
AL954642.1-201ENST00000428088 IGLV5-48A0A075B6I7 105 aa10.46□□□□□ -0.73
AL954642.1-201ENST00000428088 H7C2G1 150 aa10.46□□□□□ -0.73
AL954642.1-201ENST00000428088 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.73
AL954642.1-201ENST00000428088 A4D1N5 150 aa10.45□□□□□ -0.74
AL954642.1-201ENST00000428088 C9orf92A6NGG3 77 aa10.45□□□□□ -0.74
AL954642.1-201ENST00000428088 HIST3H2BBQ8N257 126 aa10.45□□□□□ -0.74
AL954642.1-201ENST00000428088 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
AL954642.1-201ENST00000428088 S100A2P29034 98 aa10.43□□□□□ -0.74
AL954642.1-201ENST00000428088 HIST1H2BLQ99880 126 aa10.43□□□□□ -0.74
AL954642.1-201ENST00000428088 NHP2Q9NX24 153 aaKnown RBP10.41□□□□□ -0.74
AL954642.1-201ENST00000428088 HSBP1L1C9JCN9 74 aa10.39□□□□□ -0.75
AL954642.1-201ENST00000428088 Q5XG85 94 aa10.38□□□□□ -0.75
AL954642.1-201ENST00000428088 PCOTHQ58A44 107 aa10.37□□□□□ -0.75
AL954642.1-201ENST00000428088 VAMP3Q15836 100 aa10.36□□□□□ -0.75
AL954642.1-201ENST00000428088 C1orf195Q5TG92 126 aa10.36□□□□□ -0.75
AL954642.1-201ENST00000428088 LINC00575Q6W349 94 aa10.35□□□□□ -0.75
AL954642.1-201ENST00000428088 S100A6P06703 90 aa10.34□□□□□ -0.75
AL954642.1-201ENST00000428088 IGLV8-61A0A075B6I0 122 aa10.32□□□□□ -0.76
AL954642.1-201ENST00000428088 hADV29S1A0JD25 119 aa10.31□□□□□ -0.76
AL954642.1-201ENST00000428088 F8WEM9 126 aa10.31□□□□□ -0.76
AL954642.1-201ENST00000428088 S100A1P23297 94 aa10.31□□□□□ -0.76
AL954642.1-201ENST00000428088 Q6ZQY7 126 aa10.31□□□□□ -0.76
AL954642.1-201ENST00000428088 SCGB1D1O95968 90 aa10.3□□□□□ -0.76
AL954642.1-201ENST00000428088 C12orf57Q99622 126 aa10.3□□□□□ -0.76
AL954642.1-201ENST00000428088 TCL1BO95988 128 aa10.28□□□□□ -0.76
AL954642.1-201ENST00000428088 LCE2CQ5TA81 110 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms