RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 C4orf48Q5BLP8 95 aa13.08□□□□□ -0.32
SEMA3C-204ENST00000427167 SPAG11AQ6PDA7 123 aa13.08□□□□□ -0.32
SEMA3C-204ENST00000427167 Q8NBF4 154 aa13.08□□□□□ -0.32
SEMA3C-204ENST00000427167 LITAFQ99732 161 aa13.08□□□□□ -0.32
SEMA3C-204ENST00000427167 TTTY13Q9BZ97 58 aa13.08□□□□□ -0.32
SEMA3C-204ENST00000427167 CTAG1AP78358 180 aa13.07□□□□□ -0.32
SEMA3C-204ENST00000427167 LINC00483Q53H64 154 aa13.07□□□□□ -0.32
SEMA3C-204ENST00000427167 COA6Q5JTJ3 125 aaKnown RBP13.07□□□□□ -0.32
SEMA3C-204ENST00000427167 LINC00308Q8TCZ7 52 aa13.07□□□□□ -0.32
SEMA3C-204ENST00000427167 ZNF73O43830 326 aaPredicted RBP13.05□□□□□ -0.32
SEMA3C-204ENST00000427167 TIMM17BO60830 172 aa13.05□□□□□ -0.32
SEMA3C-204ENST00000427167 IGLV7-46A0A075B6I9 117 aa13.04□□□□□ -0.32
SEMA3C-204ENST00000427167 IGLV9-49A0A0B4J1Y8 123 aa13.04□□□□□ -0.32
SEMA3C-204ENST00000427167 JOSD1Q15040 202 aaPredicted RBP13.04□□□□□ -0.32
SEMA3C-204ENST00000427167 OR13C6PQ8NH95 151 aa13.04□□□□□ -0.32
SEMA3C-204ENST00000427167 SPANXCQ9NY87 97 aa13.04□□□□□ -0.32
SEMA3C-204ENST00000427167 MOBPQ13875 183 aa13.02□□□□□ -0.33
SEMA3C-204ENST00000427167 C20orf202A1L168 122 aa13.01□□□□□ -0.33
SEMA3C-204ENST00000427167 MUC2Q02817 5179 aa13□□□□□ -0.33
SEMA3C-204ENST00000427167 HINT1P49773 126 aaPredicted RBP12.99□□□□□ -0.33
SEMA3C-204ENST00000427167 ATOH7Q8N100 152 aa12.99□□□□□ -0.33
SEMA3C-204ENST00000427167 CDIP1Q9H305 208 aa12.99□□□□□ -0.33
SEMA3C-204ENST00000427167 CBY1Q9Y3M2 126 aa12.99□□□□□ -0.33
SEMA3C-204ENST00000427167 TPRXLQ17RH7 258 aa12.98□□□□□ -0.33
SEMA3C-204ENST00000427167 SCGB1D4Q6XE38 83 aa12.97□□□□□ -0.33
SEMA3C-204ENST00000427167 ANKRD39Q53RE8 183 aa12.96□□□□□ -0.33
SEMA3C-204ENST00000427167 ST20-AS1Q8NBB2 130 aa12.96□□□□□ -0.33
SEMA3C-204ENST00000427167 SPINK1P00995 79 aa12.95□□□□□ -0.34
SEMA3C-204ENST00000427167 SPANXDQ9BXN6 97 aa12.95□□□□□ -0.34
SEMA3C-204ENST00000427167 C9orf153Q5TBE3 101 aa12.93□□□□□ -0.34
SEMA3C-204ENST00000427167 SSBP3-AS1Q7Z2R9 100 aa12.93□□□□□ -0.34
SEMA3C-204ENST00000427167 FP248Q71RG6 208 aaPredicted RBP12.91□□□□□ -0.34
SEMA3C-204ENST00000427167 LINC00518Q8N0U6 118 aa12.91□□□□□ -0.34
SEMA3C-204ENST00000427167 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
SEMA3C-204ENST00000427167 DHRS4-AS1Q9P1J3 65 aa12.88□□□□□ -0.35
SEMA3C-204ENST00000427167 COX7BP24311 80 aa12.87□□□□□ -0.35
SEMA3C-204ENST00000427167 C6orf99Q4VX62 202 aa12.87□□□□□ -0.35
SEMA3C-204ENST00000427167 AKR1D1P51857 326 aa12.86□□□□□ -0.35
SEMA3C-204ENST00000427167 C5orf52A6NGY3 159 aa12.85□□□□□ -0.35
SEMA3C-204ENST00000427167 COPS9Q8WXC6 57 aa12.85□□□□□ -0.35
SEMA3C-204ENST00000427167 IFITM1P13164 125 aa12.84□□□□□ -0.35
SEMA3C-204ENST00000427167 ELOF1P60002 83 aaKnown RBP12.84□□□□□ -0.35
SEMA3C-204ENST00000427167 S100A2P29034 98 aa12.83□□□□□ -0.36
SEMA3C-204ENST00000427167 RPS29P62273 56 aaKnown RBP12.83□□□□□ -0.36
SEMA3C-204ENST00000427167 HIST3H2BBQ8N257 126 aa12.83□□□□□ -0.36
SEMA3C-204ENST00000427167 Q8N377 158 aa12.83□□□□□ -0.36
SEMA3C-204ENST00000427167 A0A0U1RQV1 116 aa12.82□□□□□ -0.36
SEMA3C-204ENST00000427167 A6NDN8 102 aa12.82□□□□□ -0.36
SEMA3C-204ENST00000427167 MUSTN1Q8IVN3 82 aa12.82□□□□□ -0.36
SEMA3C-204ENST00000427167 Q6ZVH6 145 aa12.81□□□□□ -0.36
SEMA3C-204ENST00000427167 HIST1H2BLQ99880 126 aa12.81□□□□□ -0.36
SEMA3C-204ENST00000427167 MUC17Q685J3 4493 aa12.8□□□□□ -0.36
SEMA3C-204ENST00000427167 KRTAP13-3Q3SY46 172 aa12.8□□□□□ -0.36
SEMA3C-204ENST00000427167 SLC25A34Q6PIV7 304 aa12.8□□□□□ -0.36
SEMA3C-204ENST00000427167 SLC25A20O43772 301 aa12.79□□□□□ -0.36
SEMA3C-204ENST00000427167 SPRR1BP22528 89 aa12.79□□□□□ -0.36
SEMA3C-204ENST00000427167 SNRPEP62304 92 aaKnown RBP12.79□□□□□ -0.36
SEMA3C-204ENST00000427167 S100A1P23297 94 aa12.78□□□□□ -0.36
SEMA3C-204ENST00000427167 DEFB105AQ8NG35 78 aa12.78□□□□□ -0.36
SEMA3C-204ENST00000427167 TAL2Q16559 108 aa12.77□□□□□ -0.37
SEMA3C-204ENST00000427167 LAMTOR3Q9UHA4 124 aa12.77□□□□□ -0.37
SEMA3C-204ENST00000427167 TRBV7-6A0A0J9YX20 115 aa12.75□□□□□ -0.37
SEMA3C-204ENST00000427167 S100A6P06703 90 aa12.75□□□□□ -0.37
SEMA3C-204ENST00000427167 HRCT1Q6UXD1 115 aa12.75□□□□□ -0.37
SEMA3C-204ENST00000427167 A0A1B0GWB2 263 aa12.74□□□□□ -0.37
SEMA3C-204ENST00000427167 HSBP1L1C9JCN9 74 aa12.74□□□□□ -0.37
SEMA3C-204ENST00000427167 Q1RN00 199 aa12.74□□□□□ -0.37
SEMA3C-204ENST00000427167 TRAV13-2A0A0B4J235 113 aa12.71□□□□□ -0.37
SEMA3C-204ENST00000427167 TEX49A0A1B0GTD5 131 aa12.7□□□□□ -0.38
SEMA3C-204ENST00000427167 SMIM11BQ8TCY0 68 aa12.69□□□□□ -0.38
SEMA3C-204ENST00000427167 LIMD2Q9BT23 127 aa12.67□□□□□ -0.38
SEMA3C-204ENST00000427167 FAT4Q6V0I7 4981 aa12.66□□□□□ -0.38
SEMA3C-204ENST00000427167 A4D1N5 150 aa12.65□□□□□ -0.38
SEMA3C-204ENST00000427167 SCGB1D1O95968 90 aa12.64□□□□□ -0.39
SEMA3C-204ENST00000427167 PRO1933Q9H354 126 aa12.64□□□□□ -0.39
SEMA3C-204ENST00000427167 LINC01547P58512 204 aaPredicted RBP12.63□□□□□ -0.39
SEMA3C-204ENST00000427167 IGLV5-48A0A075B6I7 105 aa12.62□□□□□ -0.39
SEMA3C-204ENST00000427167 ASB16-AS1Q495Z4 193 aa12.62□□□□□ -0.39
SEMA3C-204ENST00000427167 SMIM29Q86T20 159 aa12.62□□□□□ -0.39
SEMA3C-204ENST00000427167 NHP2Q9NX24 153 aaKnown RBP12.62□□□□□ -0.39
SEMA3C-204ENST00000427167 H7C2G1 150 aa12.59□□□□□ -0.39
SEMA3C-204ENST00000427167 SEC61BP60468 96 aaKnown RBP12.59□□□□□ -0.39
SEMA3C-204ENST00000427167 VAMP3Q15836 100 aa12.58□□□□□ -0.4
SEMA3C-204ENST00000427167 A0A0G2JQZ4 141 aa12.57□□□□□ -0.4
SEMA3C-204ENST00000427167 CD164Q04900 197 aa12.57□□□□□ -0.4
SEMA3C-204ENST00000427167 C12orf57Q99622 126 aa12.57□□□□□ -0.4
SEMA3C-204ENST00000427167 XP32Q5T750 250 aa12.56□□□□□ -0.4
SEMA3C-204ENST00000427167 HIST1H4GQ99525 98 aa12.56□□□□□ -0.4
SEMA3C-204ENST00000427167 LCE2AQ5TA79 106 aaPredicted RBP12.53□□□□□ -0.4
SEMA3C-204ENST00000427167 LINC00575Q6W349 94 aa12.53□□□□□ -0.4
SEMA3C-204ENST00000427167 COX8AP10176 69 aa12.52□□□□□ -0.41
SEMA3C-204ENST00000427167 C9orf92A6NGG3 77 aa12.51□□□□□ -0.41
SEMA3C-204ENST00000427167 KRTAP4-1Q9BYQ7 146 aa12.51□□□□□ -0.41
SEMA3C-204ENST00000427167 hADV29S1A0JD25 119 aa12.49□□□□□ -0.41
SEMA3C-204ENST00000427167 F8WEM9 126 aa12.49□□□□□ -0.41
SEMA3C-204ENST00000427167 Q6ZQY7 126 aa12.49□□□□□ -0.41
SEMA3C-204ENST00000427167 C14orf144Q96I85 54 aa12.46□□□□□ -0.41
SEMA3C-204ENST00000427167 Q5XG85 94 aa12.45□□□□□ -0.42
SEMA3C-204ENST00000427167 PAM16Q9Y3D7 125 aa12.45□□□□□ -0.42
SEMA3C-204ENST00000427167 DLEU1O43261 78 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms